FFCP PHASE1:Hg19::chr1:110306531..110306553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79574 | |EntrezGene=79574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21297 | |HGNC=21297 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000361852,ENST00000472325,ENST00000477568_5end | |||
|cluster_id=chr1:110306531..110306553,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_EPS8L3_5end | |||
|id=chr1:110306531..110306553,- | |||
|ontology_enrichment_celltype=CL:0000181!1.34e-08!12;CL:0000417!1.34e-08!12;CL:0000668!1.34e-08!12;CL:0000414!1.34e-08!12;CL:0000412!1.34e-08!12;CL:0000182!1.34e-08!12;CL:0000223!1.62e-08!59;CL:0002150!2.83e-07!3;CL:0000861!2.83e-07!3;CL:0000066!8.42e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.68e-15;12!CL:0002178;4.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.70e-15,12;CL:0000223,6.39e-11,58;CL:0002178,4.23e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.19e-25;13!UBERON:0004161;3.50e-23;11!UBERON:0003104;2.80e-12;31!UBERON:0001041;3.14e-10;30!UBERON:0006595;3.28e-09;86!UBERON:0006242;3.95e-07;1!UBERON:0001045;6.99e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.21e-17!106;DOID:0050687!1.62e-10!143;DOID:299!2.85e-10!25;DOID:162!3.43e-08!235;DOID:14566!8.62e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.65e-13;14!DOID:3493;5.53e-12;2!DOID:4929;6.34e-12;2!DOID:299;6.91e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.59e-13,14;DOID:305,1.62e-12,106;DOID:3493,5.84e-12,2;DOID:4929,6.17e-12,2;DOID:299,6.86e-10,25;DOID:0050687,2.63e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.50e-17!129;UBERON:0004185!1.50e-17!129;UBERON:0005409!5.69e-17!35;UBERON:0000160!9.87e-16!27;UBERON:0001007!1.08e-14!155;UBERON:0001555!1.08e-14!155;UBERON:0007026!1.08e-14!155;UBERON:0009497!1.82e-14!25;UBERON:0000015!1.82e-14!25;UBERON:0002423!1.82e-14!25;UBERON:0006235!1.82e-14!25;UBERON:0004161!1.82e-14!25;UBERON:0009854!1.22e-13!23;UBERON:0004119!2.69e-13!169;UBERON:0000925!2.69e-13!169;UBERON:0006595!2.69e-13!169;UBERON:0008835!4.59e-12!22;UBERON:0003894!4.59e-12!22;UBERON:0000077!7.13e-12!130;UBERON:0009856!1.12e-11!26;UBERON:0000059!2.84e-10!11;UBERON:0007499!2.93e-10!25;UBERON:0003929!6.22e-10!54;UBERON:0004907!3.81e-08!5;UBERON:0002294!4.80e-08!7;UBERON:0001173!4.80e-08!7;UBERON:0004912!4.80e-08!7;UBERON:0002107!5.34e-08!19;UBERON:0006925!5.34e-08!19;UBERON:0008836!5.34e-08!19;UBERON:0005172!5.43e-08!55;UBERON:0005173!5.43e-08!55;UBERON:0001046!7.46e-08!19;UBERON:0005177!3.16e-07!107;UBERON:0002417!8.66e-07!61;UBERON:0000916!8.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.61e-51;22!UBERON:0000160;8.95e-43;17!UBERON:0004921;1.45e-30;33!UBERON:0000059;1.55e-24;11!UBERON:0002423;1.14e-23;25!UBERON:0002108;2.38e-18;4!UBERON:0004907;3.95e-18;5!UBERON:0001155;1.18e-15;9!UBERON:0001007;1.64e-13;81!UBERON:0001052;3.21e-13;4!UBERON:0002107;8.01e-13;19!UBERON:0006925;8.01e-13;19!UBERON:0002294;1.40e-12;7!UBERON:0001173;1.40e-12;7!UBERON:0000945;2.32e-10;5!UBERON:0010039;2.32e-10;5!UBERON:0001555;2.94e-10;54!UBERON:0002114;2.79e-08;2!UBERON:0002110;3.29e-08;3!UBERON:0002365;3.25e-07;31!UBERON:0002330;3.25e-07;31!UBERON:0001154;6.99e-07;1!UBERON:0001153;6.99e-07;1!UBERON:0009854;6.99e-07;1!UBERON:0002368;7.59e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.36e-45,25;UBERON:0000160,8.95e-43,17;UBERON:0004921,1.42e-25,118;UBERON:0000059,1.55e-24,11;UBERON:0009497,1.06e-23,25;UBERON:0000015,1.06e-23,25;UBERON:0002423,1.06e-23,25;UBERON:0006235,1.06e-23,25;UBERON:0004161,1.06e-23,25;UBERON:0001007,1.36e-23,145;UBERON:0001555,1.36e-23,145;UBERON:0007026,1.36e-23,145;UBERON:0009854,2.24e-21,23;UBERON:0004119,7.49e-21,160;UBERON:0000925,7.49e-21,160;UBERON:0006595,7.49e-21,160;UBERON:0009856,1.05e-18,26;UBERON:0002108,2.33e-18,4;UBERON:0004907,3.95e-18,5;UBERON:0008835,4.57e-18,22;UBERON:0003894,4.57e-18,22;UBERON:0003929,2.01e-16,54;UBERON:0007499,1.01e-15,25;UBERON:0001155,1.18e-15,9;UBERON:0001052,3.21e-13,4;UBERON:0002107,7.93e-13,19;UBERON:0006925,7.93e-13,19;UBERON:0008836,7.93e-13,19;UBERON:0011216,6.33e-12,223;UBERON:0005911,1.84e-11,82;UBERON:0002294,7.67e-10,9;UBERON:0001173,7.67e-10,9;UBERON:0004912,7.67e-10,9;UBERON:0001041,4.34e-09,87;UBERON:0002114,2.74e-08,2;UBERON:0002110,3.06e-08,3;UBERON:0006242,3.06e-08,3;UBERON:0002365,1.58e-07,31;UBERON:0002330,1.58e-07,31;UBERON:0001046,4.36e-07,19;UBERON:0001154,6.99e-07,1;UBERON:0001153,6.99e-07,1;UBERON:0001045,6.99e-07,1 | |||
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| ||
|short_description=p1@EPS8L3 | |||
}} | }} |
Latest revision as of 22:56, 15 September 2015
Short description: | p1@EPS8L3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPS8L3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000361852, ENST00000472325, ENST00000477568_5end |
EntrezGene: | EPS8L3 |
HGNC: | 21297 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.70e-15 | 12 |
endodermal cell | 6.39e-11 | 58 |
epithelial cell of stomach | 4.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.59e-13 | 14 |
carcinoma | 1.62e-12 | 106 |
signet ring cell adenocarcinoma | 5.84e-12 | 2 |
tubular adenocarcinoma | 6.17e-12 | 2 |
adenocarcinoma | 6.86e-10 | 25 |
cell type cancer | 2.63e-08 | 143 |