FFCP PHASE1:Hg19::chr16:30751953..30751988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10847 | |EntrezGene=10847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16974 | |HGNC=16974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483578_5end | |association_with_transcript=0bp_to_ENST00000483578_5end | ||
|cluster_id=chr16:30751953..30751988,+ | |||
|coexpression_cluster_id=C2370 | |||
|description=CAGE_peak_3_at_SRCAP_5end | |description=CAGE_peak_3_at_SRCAP_5end | ||
|id=chr16:30751953..30751988,+ | |id=chr16:30751953..30751988,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.99e-35!254;CL:0002076!3.35e-18!43;CL:0000223!1.01e-12!59;CL:0000076!4.89e-10!62;CL:0002321!5.19e-10!248;CL:0000220!1.09e-09!246;CL:0002368!2.57e-09!13;CL:0002251!6.75e-08!21 | |ontology_enrichment_celltype=CL:0000066!3.99e-35!254;CL:0002076!3.35e-18!43;CL:0000223!1.01e-12!59;CL:0000076!4.89e-10!62;CL:0002321!5.19e-10!248;CL:0000220!1.09e-09!246;CL:0002368!2.57e-09!13;CL:0002251!6.75e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.07e-16;42!CL:0002368;5.03e-11;13!CL:0002159;1.92e-08;14!CL:0002251;3.02e-08;20!CL:1000497;6.65e-08;17!CL:0002518;6.65e-08;17!CL:1000507;7.93e-08;10!CL:1000494;7.93e-08;10!CL:0000349;1.37e-07;19!CL:0002202;1.89e-07;9!CL:0002632;1.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.68e-38,253;CL:0002076,1.86e-21,42;CL:0000223,6.03e-15,58;CL:0002368,5.12e-11,13;CL:0000076,6.37e-11,63;CL:0002159,2.23e-08,14;CL:0002251,3.28e-08,20;CL:1000497,6.82e-08,17;CL:0002518,6.82e-08,17;CL:1000507,8.65e-08,10;CL:1000494,8.65e-08,10;CL:0000349,1.46e-07,19;CL:0002202,1.91e-07,9;CL:0002632,1.91e-07,9;CL:0002077,5.16e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;2.82e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.00e-09!106;DOID:1749!7.62e-07!14;DOID:299!7.96e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-09;14!DOID:299;1.63e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.57e-10,106;DOID:1749,3.53e-09,14;DOID:299,1.45e-07,25;DOID:0050687,2.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.21e-18!169;UBERON:0000925!8.21e-18!169;UBERON:0006595!8.21e-18!169;UBERON:0000464!1.40e-12!104;UBERON:0001007!6.73e-12!155;UBERON:0001555!6.73e-12!155;UBERON:0007026!6.73e-12!155;UBERON:0001004!5.53e-11!72;UBERON:0001008!7.04e-11!45;UBERON:0006554!1.03e-10!44;UBERON:0003104!7.61e-10!238;UBERON:0009142!7.61e-10!238;UBERON:0000466!1.22e-09!126;UBERON:0005177!2.14e-09!107;UBERON:0000077!3.04e-09!130;UBERON:0005153!4.96e-09!37;UBERON:0004921!6.00e-09!129;UBERON:0004185!6.00e-09!129;UBERON:0005631!8.24e-09!14;UBERON:0000158!8.24e-09!14;UBERON:0000468!9.29e-09!659;UBERON:0000161!1.36e-08!35;UBERON:0005156!1.56e-08!59;UBERON:0000990!1.56e-08!59;UBERON:0005157!1.58e-08!51;UBERON:0000062!1.60e-08!511;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0005911!2.75e-08!82;UBERON:0003100!3.02e-08!41;UBERON:0002100!4.04e-08!216;UBERON:0003064!4.74e-08!37;UBERON:0005181!8.28e-08!35;UBERON:0000065!9.46e-08!53;UBERON:0000922!1.54e-07!612;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0000481!2.69e-07!347;UBERON:0000058!4.48e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!8.21e-18!169;UBERON:0000925!8.21e-18!169;UBERON:0006595!8.21e-18!169;UBERON:0000464!1.40e-12!104;UBERON:0001007!6.73e-12!155;UBERON:0001555!6.73e-12!155;UBERON:0007026!6.73e-12!155;UBERON:0001004!5.53e-11!72;UBERON:0001008!7.04e-11!45;UBERON:0006554!1.03e-10!44;UBERON:0003104!7.61e-10!238;UBERON:0009142!7.61e-10!238;UBERON:0000466!1.22e-09!126;UBERON:0005177!2.14e-09!107;UBERON:0000077!3.04e-09!130;UBERON:0005153!4.96e-09!37;UBERON:0004921!6.00e-09!129;UBERON:0004185!6.00e-09!129;UBERON:0005631!8.24e-09!14;UBERON:0000158!8.24e-09!14;UBERON:0000468!9.29e-09!659;UBERON:0000161!1.36e-08!35;UBERON:0005156!1.56e-08!59;UBERON:0000990!1.56e-08!59;UBERON:0005157!1.58e-08!51;UBERON:0000062!1.60e-08!511;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0005911!2.75e-08!82;UBERON:0003100!3.02e-08!41;UBERON:0002100!4.04e-08!216;UBERON:0003064!4.74e-08!37;UBERON:0005181!8.28e-08!35;UBERON:0000065!9.46e-08!53;UBERON:0000922!1.54e-07!612;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0000481!2.69e-07!347;UBERON:0000058!4.48e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.05e-09;30!UBERON:0001008;1.05e-09;30!UBERON:0005178;1.97e-08;34!UBERON:0002224;1.97e-08;34!UBERON:0005911;6.08e-08;36!UBERON:0004211;7.93e-08;10!UBERON:0009773;7.93e-08;10!UBERON:0001231;7.93e-08;10!UBERON:0004810;7.93e-08;10!UBERON:0005181;1.23e-07;35!UBERON:0005631;1.78e-07;10!UBERON:0000158;1.78e-07;10!UBERON:0007196;6.34e-07;15!UBERON:0001558;6.34e-07;15!UBERON:0000486;6.76e-07;12!UBERON:0000478;6.94e-07;24!UBERON:0002113;8.07e-07;24!UBERON:0011143;8.07e-07;24!UBERON:0004807;8.84e-07;22 | |||
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| ||
|short_description=p3@SRCAP | |short_description=p3@SRCAP | ||
}} | }} |
Latest revision as of 09:26, 16 September 2015
Short description: | p3@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRCAP_5end |
Coexpression cluster: | C2370_Placental_Alveolar_Urothelial_Amniotic_renal_serous_amniotic |
Association with transcript: | 0bp_to_ENST00000483578_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.68e-38 | 253 |
endo-epithelial cell | 1.86e-21 | 42 |
endodermal cell | 6.03e-15 | 58 |
respiratory epithelial cell | 5.12e-11 | 13 |
squamous epithelial cell | 6.37e-11 | 63 |
general ecto-epithelial cell | 2.23e-08 | 14 |
epithelial cell of alimentary canal | 3.28e-08 | 20 |
kidney cell | 6.82e-08 | 17 |
kidney epithelial cell | 6.82e-08 | 17 |
kidney tubule cell | 8.65e-08 | 10 |
nephron tubule epithelial cell | 8.65e-08 | 10 |
extraembryonic cell | 1.46e-07 | 19 |
epithelial cell of tracheobronchial tree | 1.91e-07 | 9 |
epithelial cell of lower respiratory tract | 1.91e-07 | 9 |
ecto-epithelial cell | 5.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.57e-10 | 106 |
squamous cell carcinoma | 3.53e-09 | 14 |
adenocarcinoma | 1.45e-07 | 25 |
cell type cancer | 2.05e-07 | 143 |