FFCP PHASE1:Hg19::chr10:11865317..11865332,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:11865317..11865332,+
|short_description=p2@C10orf47
|description=CAGE_peak_2_at_C10orf47_5end
|association_with_transcript=-5bp_to_ENST00000474155_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=254427 | |EntrezGene=254427 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23728 | |HGNC=23728 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000474155_5end | |||
|cluster_id=chr10:11865317..11865332,+ | |||
|description=CAGE_peak_2_at_C10orf47_5end | |||
|id=chr10:11865317..11865332,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.54e-40!254;CL:0000223!6.68e-16!59;CL:0002076!3.74e-14!43;CL:0000076!3.49e-10!62;CL:0002368!3.66e-09!13;CL:0000220!5.51e-07!246;CL:0002321!5.59e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.05e-14;13!CL:0002076;1.78e-12;42!CL:1000507;9.75e-12;10!CL:1000494;9.75e-12;10!CL:1000449;1.82e-10;15!CL:1000497;3.06e-10;17!CL:0002518;3.06e-10;17!CL:0002202;2.18e-09;9!CL:0002632;2.18e-09;9!CL:0002681;8.42e-08;12!CL:0002584;8.42e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.52e-41,253;CL:0000223,5.40e-17,58;CL:0002076,1.78e-16,42;CL:0002368,3.35e-14,13;CL:1000507,4.11e-12,10;CL:1000494,4.11e-12,10;CL:1000449,9.75e-11,15;CL:1000497,1.93e-10,17;CL:0002518,1.93e-10,17;CL:0000076,3.35e-10,63;CL:0002202,2.31e-09,9;CL:0002632,2.31e-09,9;CL:0002681,6.35e-08,12;CL:0002584,6.35e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000223;6.33e-10;58 | |||
|ontology_enrichment_disease=DOID:305!3.69e-13!106;DOID:0050687!6.38e-11!143;DOID:162!1.03e-07!235;DOID:299!2.45e-07!25;DOID:1749!2.97e-07!14;DOID:14566!4.09e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.70e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.77e-10,14;DOID:305,1.42e-09,106;DOID:299,4.82e-07,25;DOID:0050687,7.07e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.70e-16!169;UBERON:0000925!3.70e-16!169;UBERON:0006595!3.70e-16!169;UBERON:0001007!2.21e-12!155;UBERON:0001555!2.21e-12!155;UBERON:0007026!2.21e-12!155;UBERON:0005911!2.40e-12!82;UBERON:0000077!2.78e-12!130;UBERON:0005177!4.76e-11!107;UBERON:0004921!5.06e-11!129;UBERON:0004185!5.06e-11!129;UBERON:0001041!1.53e-10!98;UBERON:0000065!3.29e-09!53;UBERON:0000466!3.31e-09!126;UBERON:0008947!5.42e-09!38;UBERON:0003258!5.42e-09!38;UBERON:0001008!9.11e-09!45;UBERON:0009569!1.47e-08!113;UBERON:0006554!2.34e-08!44;UBERON:0001004!3.16e-08!72;UBERON:0001048!3.09e-07!168;UBERON:0000072!9.11e-07!46;UBERON:0005153!9.36e-07!37;UBERON:0003104!9.68e-07!238;UBERON:0009142!9.68e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.75e-12;10!UBERON:0009773;9.75e-12;10!UBERON:0001231;9.75e-12;10!UBERON:0004810;9.75e-12;10!UBERON:0006554;2.07e-11;30!UBERON:0001008;2.07e-11;30!UBERON:0006555;1.82e-10;15!UBERON:0004819;1.82e-10;15!UBERON:0001285;1.82e-10;15!UBERON:0007684;1.82e-10;15!UBERON:0005911;6.49e-10;36!UBERON:0000065;3.84e-09;44!UBERON:0000353;1.53e-08;15!UBERON:0002113;3.23e-08;24!UBERON:0011143;3.23e-08;24!UBERON:0001225;8.42e-08;12!UBERON:0008987;8.42e-08;12!UBERON:0000072;1.37e-07;37!UBERON:0005178;3.45e-07;34!UBERON:0002224;3.45e-07;34!UBERON:0007196;4.36e-07;15!UBERON:0001558;4.36e-07;15!UBERON:0000489;5.64e-07;29!UBERON:0001851;5.73e-07;15 | |||
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| ||
|short_description=p2@C10orf47 | |||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p2@C10orf47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C10orf47_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000474155_5end |
EntrezGene: | C10orf47 |
HGNC: | 23728 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.52e-41 | 253 |
endodermal cell | 5.40e-17 | 58 |
endo-epithelial cell | 1.78e-16 | 42 |
respiratory epithelial cell | 3.35e-14 | 13 |
kidney tubule cell | 4.11e-12 | 10 |
nephron tubule epithelial cell | 4.11e-12 | 10 |
epithelial cell of nephron | 9.75e-11 | 15 |
kidney cell | 1.93e-10 | 17 |
kidney epithelial cell | 1.93e-10 | 17 |
squamous epithelial cell | 3.35e-10 | 63 |
epithelial cell of tracheobronchial tree | 2.31e-09 | 9 |
epithelial cell of lower respiratory tract | 2.31e-09 | 9 |
kidney cortical cell | 6.35e-08 | 12 |
renal cortical epithelial cell | 6.35e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.77e-10 | 14 |
carcinoma | 1.42e-09 | 106 |
adenocarcinoma | 4.82e-07 | 25 |
cell type cancer | 7.07e-07 | 143 |