FFCP PHASE1:Hg19::chr10:118897577..118897600,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:118897577..118897600,- to FFCP PHASE1:Hg19::chr10:118897577..118897600,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11023 | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |HGNC=12660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |UniProt=Q5SQQ9 | ||
|association_with_transcript=211bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |||
|cluster_id=chr10:118897577..118897600,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_5_at_VAX1_5end | |||
|id=chr10:118897577..118897600,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.26e-08;6!CL:0000404;5.26e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.36e-08,6;CL:0000031,5.36e-08,6;CL:0000404,5.36e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.10e-12;1!CL:0000031;5.26e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.89e-17;10!DOID:3095;4.83e-08;22!DOID:2994;4.83e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.19e-17,10;DOID:3095,5.15e-08,22;DOID:2994,5.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.29e-43!82;UBERON:0005743!1.25e-42!86;UBERON:0000073!2.79e-42!94;UBERON:0001016!2.79e-42!94;UBERON:0001893!2.00e-40!34;UBERON:0001049!2.50e-40!57;UBERON:0005068!2.50e-40!57;UBERON:0006241!2.50e-40!57;UBERON:0007135!2.50e-40!57;UBERON:0001869!2.38e-39!32;UBERON:0000955!9.83e-39!69;UBERON:0006238!9.83e-39!69;UBERON:0002780!1.49e-38!41;UBERON:0001890!1.49e-38!41;UBERON:0006240!1.49e-38!41;UBERON:0002791!3.62e-38!33;UBERON:0003080!1.76e-37!42;UBERON:0002616!4.52e-36!59;UBERON:0002020!2.36e-33!34;UBERON:0003528!2.36e-33!34;UBERON:0002346!5.33e-32!90;UBERON:0002619!6.69e-31!22;UBERON:0000956!1.84e-30!25;UBERON:0000203!1.84e-30!25;UBERON:0001950!2.53e-30!20;UBERON:0003056!7.83e-28!61;UBERON:0003075!2.09e-27!86;UBERON:0007284!2.09e-27!86;UBERON:0000924!1.69e-24!173;UBERON:0006601!1.69e-24!173;UBERON:0000033!2.35e-23!123;UBERON:0000153!8.35e-22!129;UBERON:0007811!8.35e-22!129;UBERON:0004121!4.09e-21!169;UBERON:0007023!1.05e-19!115;UBERON:0001872!1.14e-14!5;UBERON:0000200!1.09e-11!6;UBERON:0000025!2.07e-09!194;UBERON:0002771!5.06e-09!3;UBERON:0002021!8.95e-09!5;UBERON:0000064!1.08e-08!219;UBERON:0001871!1.22e-08!7;UBERON:0001896!1.70e-08!3;UBERON:0005290!1.70e-08!3;UBERON:0010096!1.70e-08!3;UBERON:0000369!3.18e-07!4;UBERON:0002435!3.18e-07!4;UBERON:0000204!3.18e-07!4;UBERON:0010082!3.18e-07!4;UBERON:0005162!3.84e-07!2;UBERON:0000122!3.84e-07!2;UBERON:0004111!4.63e-07!241;UBERON:0009663!6.88e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.90e-25;4!UBERON:0000923;4.90e-25;4!UBERON:0010316;4.90e-25;4!UBERON:0005291;4.90e-25;4!UBERON:0005162;9.16e-22;2!UBERON:0000122;9.16e-22;2!UBERON:0002050;3.65e-20;5!UBERON:0005423;3.65e-20;5!UBERON:0001872;2.54e-19;5!UBERON:0001893;6.01e-18;34!UBERON:0005383;4.13e-15;3!UBERON:0005382;4.13e-15;3!UBERON:0001869;2.37e-14;32!UBERON:0002791;2.69e-14;32!UBERON:0003528;3.69e-13;34!UBERON:0002020;3.69e-13;34!UBERON:0002780;2.40e-12;41!UBERON:0001890;2.40e-12;41!UBERON:0001874;3.64e-12;1!UBERON:0002336;9.10e-12;1!UBERON:0003112;9.10e-12;1!UBERON:0000941;9.10e-12;1!UBERON:0001785;9.10e-12;1!UBERON:0002464;9.10e-12;1!UBERON:0004904;9.10e-12;1!UBERON:0011215;9.10e-12;1!UBERON:0001018;9.10e-12;1!UBERON:0011158;9.10e-12;1!UBERON:0001021;9.10e-12;1!UBERON:0002473;9.10e-12;1!UBERON:0005340;9.10e-12;1!UBERON:0003544;9.10e-12;1!UBERON:0005970;9.10e-12;1!UBERON:0002316;9.10e-12;1!UBERON:0001020;9.10e-12;1!UBERON:0003128;9.10e-12;1!UBERON:0002437;9.10e-12;1!UBERON:0001703;9.10e-12;1!UBERON:0002241;9.10e-12;1!UBERON:0000369;1.43e-11;4!UBERON:0002435;1.43e-11;4!UBERON:0000204;1.43e-11;4!UBERON:0001017;6.28e-11;75!UBERON:0000955;2.63e-10;68!UBERON:0000956;6.28e-10;25!UBERON:0000203;6.28e-10;25!UBERON:0000073;1.18e-09;53!UBERON:0002616;1.18e-09;53!UBERON:0000922;2.10e-08;49!UBERON:0001950;3.65e-08;20!UBERON:0002619;1.81e-07;22!UBERON:0001016;4.11e-07;83!UBERON:0009663;5.58e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,5.41e-22,2;UBERON:0000122,5.41e-22,2;UBERON:0001016,3.38e-20,89;UBERON:0001872,4.34e-19,5;UBERON:0001893,4.15e-18,34;UBERON:0001017,2.10e-16,81;UBERON:0002346,1.21e-15,86;UBERON:0004121,3.95e-15,171;UBERON:0000924,3.95e-15,171;UBERON:0006601,3.95e-15,171;UBERON:0005383,5.68e-15,3;UBERON:0005382,5.68e-15,3;UBERON:0002780,6.03e-15,41;UBERON:0001890,6.03e-15,41;UBERON:0003080,6.03e-15,41;UBERON:0006240,6.03e-15,41;UBERON:0002791,8.91e-15,32;UBERON:0001869,8.91e-15,32;UBERON:0003528,6.76e-14,34;UBERON:0002020,6.76e-14,34;UBERON:0000955,1.47e-13,68;UBERON:0006238,1.47e-13,68;UBERON:0003056,1.89e-12,61;UBERON:0001874,3.27e-12,1;UBERON:0002336,6.26e-12,1;UBERON:0011215,6.26e-12,1;UBERON:0001018,6.26e-12,1;UBERON:0002473,6.26e-12,1;UBERON:0005340,6.26e-12,1;UBERON:0003544,6.26e-12,1;UBERON:0005970,6.26e-12,1;UBERON:0002316,6.26e-12,1;UBERON:0001020,6.26e-12,1;UBERON:0002437,6.26e-12,1;UBERON:0000941,7.76e-12,1;UBERON:0001785,7.76e-12,1;UBERON:0002464,7.76e-12,1;UBERON:0004904,7.76e-12,1;UBERON:0001021,7.76e-12,1;UBERON:0003902,7.76e-12,1;UBERON:0005425,7.76e-12,1;UBERON:0003112,1.19e-11,1;UBERON:0011158,1.19e-11,1;UBERON:0003128,1.19e-11,1;UBERON:0001703,1.19e-11,1;UBERON:0002241,1.19e-11,1;UBERON:0004761,1.19e-11,1;UBERON:0009617,1.19e-11,1;UBERON:0000369,1.82e-11,4;UBERON:0002435,1.82e-11,4;UBERON:0000204,1.82e-11,4;UBERON:0010082,1.82e-11,4;UBERON:0000073,2.00e-11,53;UBERON:0002616,2.00e-11,53;UBERON:0001049,8.91e-11,56;UBERON:0005068,8.91e-11,56;UBERON:0006241,8.91e-11,56;UBERON:0007135,8.91e-11,56;UBERON:0000956,6.86e-10,25;UBERON:0000203,6.86e-10,25;UBERON:0003075,5.23e-09,82;UBERON:0007284,5.23e-09,82;UBERON:0011216,3.93e-08,223;UBERON:0001950,4.34e-08,20;UBERON:0002619,2.12e-07,22;UBERON:0009663,6.39e-07,7;UBERON:0010371,7.12e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77936752594749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,2.34522771468088,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,1.7524294574976,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0.69647365264322,0,0,0,0,0,0,0.794305140223502,0,0,0,0.886351143382302,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.732157589411779,0.751145584238999,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,0,4.88922316233871,3.84200869202907,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.82046545696302,0.504143392443436,0.207471757392654,1.13032951942296,1.42769420259154,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,1.03343398250592,0.380494861163441,1.09394961803644,0,0,2.63806866539431,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.920818829879887,0,0,0,2.82808061848803,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77936752594749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,2.34522771468088,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,1.7524294574976,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0.69647365264322,0,0,0,0,0,0,0.794305140223502,0,0,0,0.886351143382302,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.732157589411779,0.751145584238999,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,0,4.88922316233871,3.84200869202907,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.82046545696302,0.504143392443436,0.207471757392654,1.13032951942296,1.42769420259154,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,1.03343398250592,0.380494861163441,1.09394961803644,0,0,2.63806866539431,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.920818829879887,0,0,0,2.82808061848803,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@VAX1 | |||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p5@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VAX1_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 211bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.36e-08 | 6 |
neuroblast | 5.36e-08 | 6 |
electrically signaling cell | 5.36e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.19e-17 | 10 |
germ cell and embryonal cancer | 5.15e-08 | 22 |
germ cell cancer | 5.15e-08 | 22 |