FFCP PHASE1:Hg19::chr1:1361235..1361244,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:1361235..1361244,+ to FFCP PHASE1:Hg19::chr1:1361235..1361244,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643965 | |EntrezGene=643965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |HGNC=37099 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKF7 | |UniProt=A6NKF7 | ||
|association_with_transcript=-263bp_to_NM_001146685,uc010nyp.1_5end | |||
|cluster_id=chr1:1361235..1361244,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_TMEM88B_5end | |||
|id=chr1:1361235..1361244,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.16e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.38e-14;3!UBERON:0003057;3.38e-14;3!UBERON:0005425;1.01e-11;1!UBERON:0006222;2.81e-11;1!UBERON:0006601;3.41e-11;82!UBERON:0002532;3.49e-08;206!UBERON:0010316;3.49e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;4.82e-41;6!UBERON:0000988;2.87e-30;3!UBERON:0004732;3.43e-27;13!UBERON:0005162;1.12e-21;2!UBERON:0000122;1.12e-21;2!UBERON:0001897;3.12e-21;2!UBERON:0010225;3.12e-21;2!UBERON:0002148;8.59e-21;2!UBERON:0006331;8.59e-21;2!UBERON:0009662;8.59e-21;2!UBERON:0004733;1.51e-20;12!UBERON:0002028;1.51e-20;12!UBERON:0000125;4.66e-18;9!UBERON:0002308;4.66e-18;9!UBERON:0000073;5.65e-18;53!UBERON:0002616;5.65e-18;53!UBERON:0001896;3.38e-14;3!UBERON:0002240;3.38e-14;3!UBERON:0005174;3.38e-14;3!UBERON:0005290;3.38e-14;3!UBERON:0001137;3.38e-14;3!UBERON:0001894;1.56e-13;7!UBERON:0002780;2.03e-12;41!UBERON:0001890;2.03e-12;41!UBERON:0002336;1.01e-11;1!UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0011215;1.01e-11;1!UBERON:0001018;1.01e-11;1!UBERON:0001021;1.01e-11;1!UBERON:0002473;1.01e-11;1!UBERON:0005340;1.01e-11;1!UBERON:0003544;1.01e-11;1!UBERON:0005970;1.01e-11;1!UBERON:0002316;1.01e-11;1!UBERON:0001020;1.01e-11;1!UBERON:0002437;1.01e-11;1!UBERON:0001016;1.31e-11;83!UBERON:0002038;2.81e-11;1!UBERON:0003112;2.81e-11;1!UBERON:0011158;2.81e-11;1!UBERON:0009661;2.81e-11;1!UBERON:0002950;2.81e-11;1!UBERON:0003128;2.81e-11;1!UBERON:0001891;2.81e-11;1!UBERON:0001703;2.81e-11;1!UBERON:0002241;2.81e-11;1!UBERON:0002784;4.22e-11;4!UBERON:0001017;6.61e-11;75!UBERON:0002680;1.66e-10;9!UBERON:0001895;1.66e-10;9!UBERON:0007023;7.57e-10;114!UBERON:0000955;2.03e-09;68!UBERON:0002021;6.96e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,5.07e-41,6;UBERON:0001049,5.55e-37,56;UBERON:0005068,5.55e-37,56;UBERON:0006241,5.55e-37,56;UBERON:0007135,5.55e-37,56;UBERON:0003076,2.03e-31,15;UBERON:0003057,2.03e-31,15;UBERON:0000988,1.66e-30,3;UBERON:0000073,2.83e-29,53;UBERON:0002616,2.83e-29,53;UBERON:0001016,8.10e-29,89;UBERON:0003075,2.12e-28,82;UBERON:0007284,2.12e-28,82;UBERON:0001017,2.95e-28,81;UBERON:0004732,3.29e-27,13;UBERON:0002346,5.48e-27,86;UBERON:0007023,8.05e-26,114;UBERON:0000955,9.06e-26,68;UBERON:0006238,9.06e-26,68;UBERON:0010371,5.83e-22,104;UBERON:0005162,9.15e-22,2;UBERON:0000122,9.15e-22,2;UBERON:0001897,1.70e-21,2;UBERON:0010225,1.70e-21,2;UBERON:0002148,3.13e-21,2;UBERON:0006331,3.13e-21,2;UBERON:0009662,3.13e-21,2;UBERON:0004733,1.54e-20,12;UBERON:0002028,1.54e-20,12;UBERON:0007277,1.54e-20,12;UBERON:0010314,2.96e-19,132;UBERON:0000125,3.59e-18,9;UBERON:0002308,3.59e-18,9;UBERON:0002780,1.97e-14,41;UBERON:0001890,1.97e-14,41;UBERON:0003080,1.97e-14,41;UBERON:0006240,1.97e-14,41;UBERON:0004121,4.56e-14,171;UBERON:0000924,4.56e-14,171;UBERON:0006601,4.56e-14,171;UBERON:0001896,5.05e-14,3;UBERON:0005290,5.05e-14,3;UBERON:0010096,5.05e-14,3;UBERON:0002240,5.77e-14,3;UBERON:0005174,5.77e-14,3;UBERON:0001137,5.77e-14,3;UBERON:0001894,1.04e-13,7;UBERON:0006222,1.04e-13,7;UBERON:0003056,5.00e-12,61;UBERON:0000941,8.62e-12,1;UBERON:0001785,8.62e-12,1;UBERON:0002464,8.62e-12,1;UBERON:0004904,8.62e-12,1;UBERON:0001021,8.62e-12,1;UBERON:0003902,8.62e-12,1;UBERON:0005425,8.62e-12,1;UBERON:0002336,9.57e-12,1;UBERON:0011215,9.57e-12,1;UBERON:0001018,9.57e-12,1;UBERON:0002473,9.57e-12,1;UBERON:0005340,9.57e-12,1;UBERON:0003544,9.57e-12,1;UBERON:0005970,9.57e-12,1;UBERON:0002316,9.57e-12,1;UBERON:0001020,9.57e-12,1;UBERON:0002437,9.57e-12,1;UBERON:0011216,1.13e-11,223;UBERON:0003112,1.31e-11,1;UBERON:0011158,1.31e-11,1;UBERON:0003128,1.31e-11,1;UBERON:0001703,1.31e-11,1;UBERON:0002241,1.31e-11,1;UBERON:0004761,1.31e-11,1;UBERON:0009617,1.31e-11,1;UBERON:0002784,3.12e-11,4;UBERON:0002038,3.63e-11,1;UBERON:0009661,3.63e-11,1;UBERON:0002950,3.63e-11,1;UBERON:0001891,3.63e-11,1;UBERON:0009616,3.63e-11,1;UBERON:0010286,3.63e-11,1;UBERON:0002680,1.38e-10,9;UBERON:0001895,1.38e-10,9;UBERON:0010092,1.38e-10,9;UBERON:0003528,6.51e-10,34;UBERON:0002020,6.51e-10,34;UBERON:0000025,2.62e-09,192;UBERON:0002021,6.98e-09,5;UBERON:0001893,4.52e-07,34;UBERON:0004111,5.68e-07,240 | |||
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|short_description=p4@TMEM88B | |||
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Latest revision as of 15:24, 16 September 2015
Short description: | p4@TMEM88B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -263bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data