FFCP PHASE1:Hg19::chr11:18154245..18154256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117195 | |EntrezGene=117195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17980 | |HGNC=17980 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPY5 | |UniProt=E9PPY5 | ||
|association_with_transcript=186bp_to_ENST00000531264_5end | |association_with_transcript=186bp_to_ENST00000531264_5end | ||
|cluster_id=chr11:18154245..18154256,+ | |||
|coexpression_cluster_id=C585 | |coexpression_cluster_id=C585 | ||
|description=CAGE_peak_1_at_MRGPRX3_5end | |description=CAGE_peak_1_at_MRGPRX3_5end | ||
|id=chr11:18154245..18154256,+ | |id=chr11:18154245..18154256,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.68e-18!43;CL:0000220!2.75e-17!246;CL:0002321!4.63e-17!248;CL:0000359!5.65e-17!32;CL:0002539!8.23e-16!10;CL:0002368!4.63e-15!13;CL:0000223!1.18e-13!59;CL:0000192!3.88e-12!42;CL:0000514!3.88e-12!42;CL:0002159!3.95e-12!13;CL:0002166!1.04e-11!3;CL:0002621!5.14e-11!3;CL:0000622!9.31e-11!5;CL:0000068!1.22e-10!3;CL:0000069!1.22e-10!3;CL:0000307!1.22e-10!3;CL:0000377!1.22e-10!3;CL:0002623!2.19e-10!3;CL:0000680!1.76e-09!57;CL:0000056!1.76e-09!57;CL:0000355!1.76e-09!57;CL:0002251!5.61e-09!21;CL:0000154!5.74e-09!6;CL:0000187!9.92e-09!54;CL:0000066!6.60e-08!254;CL:0000183!9.93e-08!59;CL:0000393!1.50e-07!60;CL:0000211!1.50e-07!60;CL:0002589!4.38e-07!2 | |ontology_enrichment_celltype=CL:0002076!4.68e-18!43;CL:0000220!2.75e-17!246;CL:0002321!4.63e-17!248;CL:0000359!5.65e-17!32;CL:0002539!8.23e-16!10;CL:0002368!4.63e-15!13;CL:0000223!1.18e-13!59;CL:0000192!3.88e-12!42;CL:0000514!3.88e-12!42;CL:0002159!3.95e-12!13;CL:0002166!1.04e-11!3;CL:0002621!5.14e-11!3;CL:0000622!9.31e-11!5;CL:0000068!1.22e-10!3;CL:0000069!1.22e-10!3;CL:0000307!1.22e-10!3;CL:0000377!1.22e-10!3;CL:0002623!2.19e-10!3;CL:0000680!1.76e-09!57;CL:0000056!1.76e-09!57;CL:0000355!1.76e-09!57;CL:0002251!5.61e-09!21;CL:0000154!5.74e-09!6;CL:0000187!9.92e-09!54;CL:0000066!6.60e-08!254;CL:0000183!9.93e-08!59;CL:0000393!1.50e-07!60;CL:0000211!1.50e-07!60;CL:0002589!4.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.35e-26;3!CL:0002159;4.94e-15;14!CL:0002539;9.79e-14;10!CL:0000307;3.77e-12;3!CL:0002621;9.17e-12;3!CL:0002368;1.67e-10;13!CL:0002076;2.71e-10;42!CL:0002336;7.50e-10;1!CL:0002261;7.50e-10;1!CL:0002170;7.50e-10;1!CL:0000359;9.11e-09;32!CL:0000622;1.66e-07;5!CL:0002251;8.51e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.24e-26,3;CL:0002159,5.39e-15,14;CL:0002539,9.17e-14,10;CL:0000068,3.57e-12,3;CL:0000069,3.57e-12,3;CL:0000307,3.57e-12,3;CL:0000377,3.57e-12,3;CL:0002621,6.23e-12,3;CL:0002076,1.14e-11,42;CL:0002321,3.60e-11,250;CL:0002368,1.53e-10,13;CL:0002336,7.50e-10,1;CL:0002261,7.50e-10,1;CL:0002170,7.50e-10,1;CL:0000359,6.24e-09,32;CL:0000223,3.66e-08,58;CL:0000622,1.83e-07,5;CL:0002251,7.63e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;3.77e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004237!8.23e-16!10;UBERON:0004695!8.23e-16!10;UBERON:0002111!8.23e-16!10;UBERON:0004178!8.23e-16!10;UBERON:0001637!3.88e-12!42;UBERON:0003509!3.88e-12!42;UBERON:0004572!3.88e-12!42;UBERON:0004573!7.99e-12!33;UBERON:0004571!7.99e-12!33;UBERON:0000486!4.05e-11!82;UBERON:0001949!5.14e-11!3;UBERON:0000055!6.54e-11!69;UBERON:0001135!3.56e-10!15;UBERON:0002049!5.40e-09!79;UBERON:0007798!5.40e-09!79;UBERON:0001708!7.21e-09!4;UBERON:0001704!7.21e-09!4;UBERON:0001004!7.38e-09!72;UBERON:0001981!8.16e-09!60;UBERON:0007500!8.16e-09!60;UBERON:0004537!8.16e-09!60;UBERON:0006965!8.16e-09!60;UBERON:0000914!1.22e-08!83;UBERON:0002329!1.22e-08!83;UBERON:0003077!1.22e-08!83;UBERON:0003059!1.22e-08!83;UBERON:0007282!1.22e-08!83;UBERON:0009618!1.22e-08!83;UBERON:0007285!1.22e-08!83;UBERON:0001134!1.23e-08!61;UBERON:0002036!1.23e-08!61;UBERON:0003082!1.23e-08!61;UBERON:0000166!1.33e-08!21;UBERON:0002385!2.96e-08!63;UBERON:0001015!2.96e-08!63;UBERON:0000383!2.96e-08!63;UBERON:0000165!7.53e-08!28;UBERON:0000930!7.53e-08!28;UBERON:0003126!1.59e-07!7;UBERON:0001005!1.59e-07!7;UBERON:0004290!4.23e-07!70;UBERON:0001529!4.38e-07!2;UBERON:0007204!4.38e-07!2;UBERON:0000947!5.83e-07!21;UBERON:0010191!5.83e-07!21 | |ontology_enrichment_uberon=UBERON:0004237!8.23e-16!10;UBERON:0004695!8.23e-16!10;UBERON:0002111!8.23e-16!10;UBERON:0004178!8.23e-16!10;UBERON:0001637!3.88e-12!42;UBERON:0003509!3.88e-12!42;UBERON:0004572!3.88e-12!42;UBERON:0004573!7.99e-12!33;UBERON:0004571!7.99e-12!33;UBERON:0000486!4.05e-11!82;UBERON:0001949!5.14e-11!3;UBERON:0000055!6.54e-11!69;UBERON:0001135!3.56e-10!15;UBERON:0002049!5.40e-09!79;UBERON:0007798!5.40e-09!79;UBERON:0001708!7.21e-09!4;UBERON:0001704!7.21e-09!4;UBERON:0001004!7.38e-09!72;UBERON:0001981!8.16e-09!60;UBERON:0007500!8.16e-09!60;UBERON:0004537!8.16e-09!60;UBERON:0006965!8.16e-09!60;UBERON:0000914!1.22e-08!83;UBERON:0002329!1.22e-08!83;UBERON:0003077!1.22e-08!83;UBERON:0003059!1.22e-08!83;UBERON:0007282!1.22e-08!83;UBERON:0009618!1.22e-08!83;UBERON:0007285!1.22e-08!83;UBERON:0001134!1.23e-08!61;UBERON:0002036!1.23e-08!61;UBERON:0003082!1.23e-08!61;UBERON:0000166!1.33e-08!21;UBERON:0002385!2.96e-08!63;UBERON:0001015!2.96e-08!63;UBERON:0000383!2.96e-08!63;UBERON:0000165!7.53e-08!28;UBERON:0000930!7.53e-08!28;UBERON:0003126!1.59e-07!7;UBERON:0001005!1.59e-07!7;UBERON:0004290!4.23e-07!70;UBERON:0001529!4.38e-07!2;UBERON:0007204!4.38e-07!2;UBERON:0000947!5.83e-07!21;UBERON:0010191!5.83e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.13e-20;4!UBERON:0008895;4.13e-20;4!UBERON:0011159;3.29e-16;5!UBERON:0004237;9.79e-14;10!UBERON:0004695;9.79e-14;10!UBERON:0002111;9.79e-14;10!UBERON:0004178;9.79e-14;10!UBERON:0001949;9.17e-12;3!UBERON:0001135;3.26e-09;15!UBERON:0011137;1.22e-07;11!UBERON:0010323;1.22e-07;11!UBERON:0000486;9.81e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.87e-20,4;UBERON:0008895,3.87e-20,4;UBERON:0011159,3.13e-16,5;UBERON:0004237,9.17e-14,10;UBERON:0004695,9.17e-14,10;UBERON:0002111,9.17e-14,10;UBERON:0004178,9.17e-14,10;UBERON:0010188,1.28e-13,6;UBERON:0002539,1.28e-13,6;UBERON:0008816,1.28e-13,6;UBERON:0001949,6.23e-12,3;UBERON:0001135,3.12e-09,15;UBERON:0000486,2.01e-08,83;UBERON:0010323,1.20e-07,11 | |||
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|short_description=p1@MRGPRX3 | |short_description=p1@MRGPRX3 | ||
}} | }} |
Latest revision as of 02:01, 17 September 2015
Short description: | p1@MRGPRX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRGPRX3_5end |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | 186bp_to_ENST00000531264_5end |
EntrezGene: | MRGPRX3 |
HGNC: | 17980 |
UniProt: | E9PPY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.24e-26 | 3 |
general ecto-epithelial cell | 5.39e-15 | 14 |
aortic smooth muscle cell | 9.17e-14 | 10 |
duct epithelial cell | 3.57e-12 | 3 |
branched duct epithelial cell | 3.57e-12 | 3 |
tracheal epithelial cell | 3.57e-12 | 3 |
tracheoblast | 3.57e-12 | 3 |
gingival epithelial cell | 6.23e-12 | 3 |
endo-epithelial cell | 1.14e-11 | 42 |
embryonic cell | 3.60e-11 | 250 |
respiratory epithelial cell | 1.53e-10 | 13 |
buccal mucosa cell | 7.50e-10 | 1 |
endothelial cell of viscerocranial mucosa | 7.50e-10 | 1 |
keratinized cell of the oral mucosa | 7.50e-10 | 1 |
vascular associated smooth muscle cell | 6.24e-09 | 32 |
endodermal cell | 3.66e-08 | 58 |
acinar cell | 1.83e-07 | 5 |
epithelial cell of alimentary canal | 7.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.87e-20 | 4 |
splanchnocranium | 3.87e-20 | 4 |
primary subdivision of cranial skeletal system | 3.13e-16 | 5 |
blood vessel smooth muscle | 9.17e-14 | 10 |
arterial system smooth muscle | 9.17e-14 | 10 |
artery smooth muscle tissue | 9.17e-14 | 10 |
aorta smooth muscle tissue | 9.17e-14 | 10 |
protuberance | 1.28e-13 | 6 |
pharyngeal arch | 1.28e-13 | 6 |
embryonic head | 1.28e-13 | 6 |
gingival epithelium | 6.23e-12 | 3 |
smooth muscle tissue | 3.12e-09 | 15 |
multilaminar epithelium | 2.01e-08 | 83 |
cranial skeletal system | 1.20e-07 | 11 |