FFCP PHASE1:Hg19::chr15:28878244..28878278,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30495 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000382946,ENST00000524476,ENST00000529353,uc010aza.1,uc010azb.1_5end | |||
|cluster_id=chr15:28878244..28878278,+ | |||
|coexpression_cluster_id=C375 | |||
|description=CAGE_peak_3_at_HERC2P9_5end | |||
|id=chr15:28878244..28878278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.65e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.33e-08,6;CL:0002138,9.33e-08,6;CL:0005022,9.33e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.63e-12;1!UBERON:0006601;4.43e-11;82!CL:0005022;9.65e-08;6!UBERON:0010122;9.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.83e-38!57;UBERON:0005068!2.83e-38!57;UBERON:0006241!2.83e-38!57;UBERON:0007135!2.83e-38!57;UBERON:0002616!5.30e-33!59;UBERON:0002020!2.49e-31!34;UBERON:0003528!2.49e-31!34;UBERON:0002780!7.75e-30!41;UBERON:0001890!7.75e-30!41;UBERON:0006240!7.75e-30!41;UBERON:0003080!4.52e-29!42;UBERON:0001017!7.56e-28!82;UBERON:0000955!2.83e-27!69;UBERON:0006238!2.83e-27!69;UBERON:0003075!9.74e-27!86;UBERON:0007284!9.74e-27!86;UBERON:0005743!2.20e-26!86;UBERON:0000073!3.58e-26!94;UBERON:0001016!3.58e-26!94;UBERON:0007023!6.56e-26!115;UBERON:0002346!2.26e-25!90;UBERON:0002308!6.56e-24!9;UBERON:0000125!6.56e-24!9;UBERON:0002791!1.28e-23!33;UBERON:0001893!7.06e-23!34;UBERON:0001869!1.56e-20!32;UBERON:0003056!3.24e-19!61;UBERON:0006331!1.84e-18!3;UBERON:0002420!5.57e-17!9;UBERON:0007245!5.57e-17!9;UBERON:0010009!5.57e-17!9;UBERON:0010011!5.57e-17!9;UBERON:0000454!5.57e-17!9;UBERON:0002619!6.32e-16!22;UBERON:0009663!2.81e-14!7;UBERON:0000956!5.92e-14!25;UBERON:0000203!5.92e-14!25;UBERON:0000033!8.90e-14!123;UBERON:0001950!1.91e-13!20;UBERON:0001905!2.06e-13!2;UBERON:0002757!2.06e-13!2;UBERON:0010134!2.06e-13!2;UBERON:0002784!2.06e-13!2;UBERON:0005408!2.06e-13!2;UBERON:0001899!2.06e-13!2;UBERON:0001875!2.64e-13!2;UBERON:0006514!2.64e-13!2;UBERON:0002148!4.89e-13!2;UBERON:0009662!4.89e-13!2;UBERON:0000153!5.77e-13!129;UBERON:0007811!5.77e-13!129;UBERON:0004121!8.82e-13!169;UBERON:0000924!2.18e-12!173;UBERON:0006601!2.18e-12!173;UBERON:0002298!2.27e-12!8;UBERON:0004732!7.62e-12!13;UBERON:0003076!3.64e-10!15;UBERON:0003057!3.64e-10!15;UBERON:0000200!1.25e-09!6;UBERON:0000025!1.53e-09!194;UBERON:0000988!5.51e-09!3;UBERON:0004111!9.89e-09!241;UBERON:0001894!1.24e-08!7;UBERON:0006222!1.24e-08!7;UBERON:0004733!2.10e-08!12;UBERON:0002028!2.10e-08!12;UBERON:0007277!2.10e-08!12;UBERON:0000941!6.59e-08!1;UBERON:0004904!6.59e-08!1;UBERON:0002464!6.59e-08!1;UBERON:0001021!6.59e-08!1;UBERON:0001785!6.59e-08!1;UBERON:0002702!1.25e-07!1;UBERON:0005418!2.07e-07!1;UBERON:0001389!2.07e-07!1;UBERON:0000026!2.07e-07!1;UBERON:0008784!2.07e-07!1;UBERON:0006058!2.07e-07!1;UBERON:0003663!2.07e-07!1;UBERON:0001383!2.07e-07!1;UBERON:0004256!2.07e-07!1;UBERON:0002529!2.07e-07!1;UBERON:0004708!2.07e-07!1;UBERON:0002101!2.07e-07!1;UBERON:0004709!2.07e-07!1;UBERON:0003661!2.07e-07!1;UBERON:0002471!2.07e-07!1;UBERON:0004357!2.07e-07!1;UBERON:0009872!2.07e-07!1;UBERON:0004347!2.07e-07!1;UBERON:0005420!2.07e-07!1;UBERON:0005732!2.07e-07!1;UBERON:0006057!2.07e-07!1;UBERON:0000978!2.07e-07!1;UBERON:0002103!2.07e-07!1;UBERON:0001665!2.07e-07!1;UBERON:0003823!2.07e-07!1;UBERON:0000154!2.07e-07!1;UBERON:0005733!2.07e-07!1;UBERON:0005730!2.07e-07!1;UBERON:0001301!3.40e-07!1;UBERON:0002038!3.84e-07!1;UBERON:0009661!3.84e-07!1;UBERON:0003296!3.97e-07!4;UBERON:0010133!3.97e-07!4;UBERON:0002581!4.61e-07!1;UBERON:0002363!4.90e-07!1;UBERON:0007647!4.90e-07!1;UBERON:0010115!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.60e-22;34!UBERON:0002020;2.60e-22;34!UBERON:0001869;1.41e-19;32!UBERON:0002791;1.37e-18;32!UBERON:0001893;1.40e-17;34!UBERON:0002619;5.56e-16;22!UBERON:0002780;1.27e-15;41!UBERON:0001890;1.27e-15;41!UBERON:0000073;2.92e-14;53!UBERON:0002616;2.92e-14;53!UBERON:0000955;4.25e-14;68!UBERON:0000956;4.26e-14;25!UBERON:0000203;4.26e-14;25!UBERON:0004732;2.50e-13;13!UBERON:0001950;2.35e-12;20!UBERON:0001017;2.56e-12;75!UBERON:0000941;2.63e-12;1!UBERON:0001785;2.63e-12;1!UBERON:0002464;2.63e-12;1!UBERON:0004904;2.63e-12;1!UBERON:0001021;2.63e-12;1!UBERON:0002784;1.07e-11;4!UBERON:0001389;1.81e-11;1!UBERON:0000026;1.81e-11;1!UBERON:0008784;1.81e-11;1!UBERON:0006058;1.81e-11;1!UBERON:0003663;1.81e-11;1!UBERON:0004256;1.81e-11;1!UBERON:0004708;1.81e-11;1!UBERON:0002101;1.81e-11;1!UBERON:0004709;1.81e-11;1!UBERON:0002529;1.81e-11;1!UBERON:0010538;1.81e-11;1!UBERON:0003661;1.81e-11;1!UBERON:0010890;1.81e-11;1!UBERON:0002471;1.81e-11;1!UBERON:0001383;1.81e-11;1!UBERON:0010758;1.81e-11;1!UBERON:0010707;1.81e-11;1!UBERON:0000978;1.81e-11;1!UBERON:0002103;1.81e-11;1!UBERON:0001665;1.81e-11;1!UBERON:0003823;1.81e-11;1!UBERON:0000154;1.81e-11;1!UBERON:0010709;1.81e-11;1!UBERON:0000125;3.09e-11;9!UBERON:0002308;3.09e-11;9!UBERON:0002420;3.37e-11;9!UBERON:0007245;3.37e-11;9!UBERON:0010009;3.37e-11;9!UBERON:0010011;3.37e-11;9!UBERON:0000454;3.37e-11;9!UBERON:0001016;3.37e-10;83!UBERON:0000349;2.63e-09;5!UBERON:0004733;1.79e-08;12!UBERON:0002028;1.79e-08;12!UBERON:0002298;5.08e-08;6!UBERON:0000200;7.99e-08;6!UBERON:0007023;8.85e-08;114!UBERON:0009663;4.67e-07;7!UBERON:0001894;4.74e-07;7!UBERON:0001871;8.59e-07;6!UBERON:0003714;8.93e-07;2!UBERON:0005162;8.93e-07;2!UBERON:0000122;8.93e-07;2!UBERON:0001873;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.50e-34,56;UBERON:0005068,4.50e-34,56;UBERON:0006241,4.50e-34,56;UBERON:0007135,4.50e-34,56;UBERON:0000073,5.71e-31,53;UBERON:0002616,5.71e-31,53;UBERON:0003075,2.08e-26,82;UBERON:0007284,2.08e-26,82;UBERON:0002346,4.24e-25,86;UBERON:0002780,1.07e-23,41;UBERON:0001890,1.07e-23,41;UBERON:0003080,1.07e-23,41;UBERON:0006240,1.07e-23,41;UBERON:0001016,1.28e-23,89;UBERON:0000955,1.78e-23,68;UBERON:0006238,1.78e-23,68;UBERON:0003528,4.18e-23,34;UBERON:0002020,4.18e-23,34;UBERON:0001017,8.68e-23,81;UBERON:0007023,2.33e-21,114;UBERON:0010371,1.97e-20,104;UBERON:0002791,1.88e-19,32;UBERON:0001869,1.88e-19,32;UBERON:0003056,4.74e-19,61;UBERON:0001893,2.72e-18,34;UBERON:0002619,5.57e-16,22;UBERON:0010314,1.13e-15,132;UBERON:0000956,4.26e-14,25;UBERON:0000203,4.26e-14,25;UBERON:0004732,2.62e-13,13;UBERON:0001950,2.32e-12,20;UBERON:0000941,2.63e-12,1;UBERON:0001785,2.63e-12,1;UBERON:0002464,2.63e-12,1;UBERON:0004904,2.63e-12,1;UBERON:0001021,2.63e-12,1;UBERON:0003902,2.63e-12,1;UBERON:0005425,2.63e-12,1;UBERON:0002784,1.07e-11,4;UBERON:0003076,1.81e-11,15;UBERON:0003057,1.81e-11,15;UBERON:0005418,1.81e-11,1;UBERON:0001389,1.81e-11,1;UBERON:0000026,1.81e-11,1;UBERON:0008784,1.81e-11,1;UBERON:0006058,1.81e-11,1;UBERON:0003663,1.81e-11,1;UBERON:0004256,1.81e-11,1;UBERON:0004708,1.81e-11,1;UBERON:0002101,1.81e-11,1;UBERON:0004709,1.81e-11,1;UBERON:0002529,1.81e-11,1;UBERON:0010538,1.81e-11,1;UBERON:0003661,1.81e-11,1;UBERON:0010890,1.81e-11,1;UBERON:0002471,1.81e-11,1;UBERON:0001383,1.81e-11,1;UBERON:0004357,1.81e-11,1;UBERON:0004347,1.81e-11,1;UBERON:0005420,1.81e-11,1;UBERON:0005732,1.81e-11,1;UBERON:0010758,1.81e-11,1;UBERON:0010707,1.81e-11,1;UBERON:0000978,1.81e-11,1;UBERON:0002103,1.81e-11,1;UBERON:0001665,1.81e-11,1;UBERON:0003823,1.81e-11,1;UBERON:0000154,1.81e-11,1;UBERON:0010709,1.81e-11,1;UBERON:0005733,1.81e-11,1;UBERON:0005730,1.81e-11,1;UBERON:0004121,1.87e-11,171;UBERON:0000924,1.87e-11,171;UBERON:0006601,1.87e-11,171;UBERON:0000125,3.20e-11,9;UBERON:0002308,3.20e-11,9;UBERON:0002420,3.32e-11,9;UBERON:0007245,3.32e-11,9;UBERON:0010009,3.32e-11,9;UBERON:0010011,3.32e-11,9;UBERON:0000454,3.32e-11,9;UBERON:0000349,2.57e-09,5;UBERON:0004111,7.91e-09,240;UBERON:0000025,1.32e-08,192;UBERON:0004733,1.86e-08,12;UBERON:0002028,1.86e-08,12;UBERON:0007277,1.86e-08,12;UBERON:0011216,3.05e-08,223;UBERON:0002298,5.17e-08,6;UBERON:0000200,8.13e-08,6;UBERON:0001894,4.74e-07,7;UBERON:0009663,4.74e-07,7;UBERON:0006222,4.74e-07,7;UBERON:0001871,8.59e-07,6;UBERON:0003714,8.93e-07,2;UBERON:0005162,8.93e-07,2;UBERON:0000122,8.93e-07,2;UBERON:0001873,9.96e-07,2;UBERON:0010122,9.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77791307545966,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92503738970744,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4003794013937,0,3.05163472634166,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40588404193705,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56660782866512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,4.39562051629272,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0.612691153526923,0,0,4.43034089983493,2.19647276823534,0,11.4681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.420554922326,0.159633859057151,0,0,0,0,47.1139086855209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90539049306924,0,0,0,0,0,0,0,9.10693120993088,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69294554633341,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7792027129641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@HERC2P9 | |||
}} |
Latest revision as of 02:15, 17 September 2015
Short description: | p3@HERC2P9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HERC2P9_5end |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | 0bp_to_ENST00000382946, ENST00000524476, ENST00000529353, uc010aza.1, uc010azb.1_5end |
EntrezGene: | NA |
HGNC: | 30495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.33e-08 | 6 |
endothelial cell of lymphatic vessel | 9.33e-08 | 6 |
vascular lymphangioblast | 9.33e-08 | 6 |