FFCP PHASE1:Hg19::chr4:185772359..185772424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500818 | |EntrezGene=100500818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |HGNC=38954 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_NR_037510_5end | |association_with_transcript=-95bp_to_NR_037510_5end | ||
|cluster_id=chr4:185772359..185772424,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_MIR3945_5end | |description=CAGE_peak_1_at_MIR3945_5end | ||
|id=chr4:185772359..185772424,- | |id=chr4:185772359..185772424,- | ||
|ontology_enrichment_celltype=CL:0002057!7.54e-63!42;CL:0000860!1.33e-57!45;CL:0000738!5.63e-51!140;CL:0000766!1.20e-46!76;CL:0002087!2.43e-43!119;CL:0002194!7.72e-40!63;CL:0000576!7.72e-40!63;CL:0000040!7.72e-40!63;CL:0000559!7.72e-40!63;CL:0000988!2.43e-38!182;CL:0002009!3.74e-38!65;CL:0000037!4.04e-38!172;CL:0000566!4.04e-38!172;CL:0002031!6.81e-36!124;CL:0000839!2.30e-34!70;CL:0000557!1.13e-33!71;CL:0002032!9.84e-33!165;CL:0000837!9.84e-33!165;CL:0000763!3.44e-27!112;CL:0000049!3.44e-27!112;CL:0002393!4.86e-14!9;CL:0002397!4.86e-14!9;CL:0000094!1.14e-13!8;CL:0000081!1.38e-11!11;CL:0000134!1.99e-09!358;CL:0000080!2.18e-09!6;CL:0002320!7.59e-09!365;CL:0000219!7.37e-07!390 | |ontology_enrichment_celltype=CL:0002057!7.54e-63!42;CL:0000860!1.33e-57!45;CL:0000738!5.63e-51!140;CL:0000766!1.20e-46!76;CL:0002087!2.43e-43!119;CL:0002194!7.72e-40!63;CL:0000576!7.72e-40!63;CL:0000040!7.72e-40!63;CL:0000559!7.72e-40!63;CL:0000988!2.43e-38!182;CL:0002009!3.74e-38!65;CL:0000037!4.04e-38!172;CL:0000566!4.04e-38!172;CL:0002031!6.81e-36!124;CL:0000839!2.30e-34!70;CL:0000557!1.13e-33!71;CL:0002032!9.84e-33!165;CL:0000837!9.84e-33!165;CL:0000763!3.44e-27!112;CL:0000049!3.44e-27!112;CL:0002393!4.86e-14!9;CL:0002397!4.86e-14!9;CL:0000094!1.14e-13!8;CL:0000081!1.38e-11!11;CL:0000134!1.99e-09!358;CL:0000080!2.18e-09!6;CL:0002320!7.59e-09!365;CL:0000219!7.37e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-76;33!CL:0002057;2.63e-76;33!CL:0000576;1.19e-53;48!CL:0000473;1.15e-52;39!CL:0000234;1.15e-52;39!CL:0000766;5.93e-38;69!CL:0000094;3.68e-22;8!CL:0002087;4.55e-18;104!CL:0002393;7.16e-17;6!CL:0002397;7.16e-17;6!CL:0000763;1.29e-16;100!CL:0000081;1.11e-15;11!CL:0000738;3.47e-13;136!CL:0000775;9.34e-10;3!CL:0000988;2.99e-09;177!CL:0000226;4.83e-09;3!CL:0000842;4.83e-09;3!CL:0000767;1.47e-08;3!CL:0000784;4.97e-08;3!CL:0000771;2.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-101,42;CL:0002057,1.16e-101,42;CL:0000473,1.77e-87,48;CL:0000234,1.77e-87,48;CL:0000766,5.69e-84,72;CL:0002194,3.88e-71,59;CL:0000576,3.88e-71,59;CL:0000040,3.88e-71,59;CL:0000559,3.88e-71,59;CL:0002009,1.86e-68,61;CL:0000738,5.57e-63,136;CL:0000839,1.85e-62,66;CL:0000557,2.30e-61,67;CL:0000763,9.36e-52,108;CL:0000049,9.36e-52,108;CL:0002087,8.51e-51,115;CL:0000988,2.03e-48,177;CL:0000037,3.64e-48,168;CL:0002031,1.22e-41,120;CL:0002032,1.93e-41,161;CL:0000837,1.93e-41,161;CL:0000094,3.53e-22,8;CL:0002393,2.00e-18,9;CL:0002397,2.00e-18,9;CL:0000134,8.99e-16,354;CL:0000081,1.08e-15,11;CL:0002320,3.56e-15,361;CL:0000219,4.45e-13,386;CL:0000034,4.85e-11,441;CL:0000048,1.58e-10,427;CL:0000723,3.53e-10,433;CL:0000775,9.35e-10,3;CL:0000226,4.58e-09,3;CL:0000842,4.58e-09,3;CL:0000767,1.41e-08,3;CL:0000784,4.78e-08,3;CL:0000771,2.81e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-73;42!CL:0000049;2.55e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-50!102;UBERON:0003061!3.31e-50!102;UBERON:0002193!7.99e-44!112;UBERON:0002371!2.91e-31!80;UBERON:0001474!5.09e-28!86;UBERON:0004765!9.67e-23!101;UBERON:0001434!9.67e-23!101;UBERON:0000178!4.48e-21!15;UBERON:0000179!4.48e-21!15;UBERON:0000463!4.48e-21!15;UBERON:0002405!5.54e-21!115;UBERON:0003081!4.34e-18!216;UBERON:0002204!1.29e-10!167;UBERON:0002384!4.59e-08!375;UBERON:0007023!2.07e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!3.31e-50!102;UBERON:0003061!3.31e-50!102;UBERON:0002193!7.99e-44!112;UBERON:0002371!2.91e-31!80;UBERON:0001474!5.09e-28!86;UBERON:0004765!9.67e-23!101;UBERON:0001434!9.67e-23!101;UBERON:0000178!4.48e-21!15;UBERON:0000179!4.48e-21!15;UBERON:0000463!4.48e-21!15;UBERON:0002405!5.54e-21!115;UBERON:0003081!4.34e-18!216;UBERON:0002204!1.29e-10!167;UBERON:0002384!4.59e-08!375;UBERON:0007023!2.07e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-30;15!UBERON:0000179;1.70e-30;15!UBERON:0000463;1.70e-30;15!UBERON:0002390;1.05e-13;32!UBERON:0002193;4.77e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-76,98;UBERON:0003061,3.57e-76,98;UBERON:0002193,7.58e-68,108;UBERON:0002371,2.05e-55,76;UBERON:0001474,1.55e-50,82;UBERON:0004765,4.89e-45,90;UBERON:0002405,3.23e-43,93;UBERON:0001434,2.15e-39,100;UBERON:0000178,1.42e-30,15;UBERON:0000179,1.42e-30,15;UBERON:0000463,1.42e-30,15;UBERON:0003081,1.70e-29,203;UBERON:0002204,4.87e-19,167;UBERON:0000926,8.54e-15,315;UBERON:0004120,8.54e-15,315;UBERON:0006603,8.54e-15,315;UBERON:0002384,2.31e-14,371 | |||
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|short_description=p1@MIR3945 | |short_description=p1@MIR3945 | ||
}} | }} |
Latest revision as of 02:21, 17 September 2015
Short description: | p1@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3945_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -95bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-76 | 98 |
blood island | 3.57e-76 | 98 |
hemolymphoid system | 7.58e-68 | 108 |
bone marrow | 2.05e-55 | 76 |
bone element | 1.55e-50 | 82 |
skeletal element | 4.89e-45 | 90 |
immune system | 3.23e-43 | 93 |
skeletal system | 2.15e-39 | 100 |
blood | 1.42e-30 | 15 |
haemolymphatic fluid | 1.42e-30 | 15 |
organism substance | 1.42e-30 | 15 |
lateral plate mesoderm | 1.70e-29 | 203 |
musculoskeletal system | 4.87e-19 | 167 |
mesoderm | 8.54e-15 | 315 |
mesoderm-derived structure | 8.54e-15 | 315 |
presumptive mesoderm | 8.54e-15 | 315 |
connective tissue | 2.31e-14 | 371 |