FFCP PHASE1:Hg19::chr20:55091919..55091934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200232 | |EntrezGene=200232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |HGNC=16100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_ENST00000481560_5end | |association_with_transcript=-308bp_to_ENST00000481560_5end | ||
|cluster_id=chr20:55091919..55091934,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_1_at_FAM209A_5end | |description=CAGE_peak_1_at_FAM209A_5end | ||
|id=chr20:55091919..55091934,+ | |id=chr20:55091919..55091934,+ | ||
|ontology_enrichment_celltype=CL:0000148!4.13e-15!10;CL:0000541!4.13e-15!10;CL:0002567!1.39e-10!3;CL:0000147!1.90e-10!14;CL:0000710!5.84e-07!20 | |ontology_enrichment_celltype=CL:0000148!4.13e-15!10;CL:0000541!4.13e-15!10;CL:0002567!1.39e-10!3;CL:0000147!1.90e-10!14;CL:0000710!5.84e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.22e-29;10!CL:0000147;2.21e-20;14!CL:0002567;5.28e-19;3!CL:0000710;5.25e-14;20!CL:0000075;3.83e-10;27!CL:0002566;1.05e-07;1!CL:0002077;4.43e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.40e-29,10;CL:0000541,5.40e-29,10;CL:0000147,1.80e-20,14;CL:0002567,3.67e-19,3;CL:0000710,4.57e-14,20;CL:0000075,3.46e-10,27;CL:0002077,6.65e-08,34;CL:0002566,1.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.81e-15;82!UBERON:0006241;2.61e-09;3!UBERON:0003057;2.61e-09;3!UBERON:0006222;1.74e-07;1!UBERON:0005425;2.67e-07;1 | |||
|ontology_enrichment_disease=DOID:1909!1.22e-07!2 | |ontology_enrichment_disease=DOID:1909!1.22e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.19e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.00e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.85e-73!57;UBERON:0005068!8.85e-73!57;UBERON:0006241!8.85e-73!57;UBERON:0007135!8.85e-73!57;UBERON:0002616!1.07e-58!59;UBERON:0001017!3.19e-55!82;UBERON:0005743!9.22e-55!86;UBERON:0000955!5.61e-54!69;UBERON:0006238!5.61e-54!69;UBERON:0002780!1.70e-51!41;UBERON:0001890!1.70e-51!41;UBERON:0006240!1.70e-51!41;UBERON:0000073!2.66e-51!94;UBERON:0001016!2.66e-51!94;UBERON:0007023!3.55e-50!115;UBERON:0003080!4.16e-50!42;UBERON:0002020!4.35e-50!34;UBERON:0003528!4.35e-50!34;UBERON:0003075!5.38e-50!86;UBERON:0007284!5.38e-50!86;UBERON:0001893!1.24e-49!34;UBERON:0002346!2.65e-47!90;UBERON:0002791!3.21e-47!33;UBERON:0001869!2.40e-44!32;UBERON:0003056!1.24e-34!61;UBERON:0002619!2.54e-32!22;UBERON:0000033!5.04e-31!123;UBERON:0000153!4.23e-29!129;UBERON:0007811!4.23e-29!129;UBERON:0004121!2.85e-28!169;UBERON:0000956!4.49e-28!25;UBERON:0000203!4.49e-28!25;UBERON:0001950!1.27e-27!20;UBERON:0000924!2.37e-27!173;UBERON:0006601!2.37e-27!173;UBERON:0002308!8.72e-26!9;UBERON:0000125!8.72e-26!9;UBERON:0003076!5.34e-23!15;UBERON:0003057!5.34e-23!15;UBERON:0009663!5.76e-20!7;UBERON:0002420!1.02e-19!9;UBERON:0007245!1.02e-19!9;UBERON:0010009!1.02e-19!9;UBERON:0010011!1.02e-19!9;UBERON:0000454!1.02e-19!9;UBERON:0002298!7.00e-19!8;UBERON:0004732!5.59e-18!13;UBERON:0000200!5.89e-17!6;UBERON:0000025!3.14e-16!194;UBERON:0004733!1.90e-15!12;UBERON:0002028!1.90e-15!12;UBERON:0007277!1.90e-15!12;UBERON:0000064!1.02e-12!219;UBERON:0000483!1.77e-12!309;UBERON:0000119!3.05e-12!312;UBERON:0004111!7.62e-12!241;UBERON:0000369!2.71e-11!4;UBERON:0002435!2.71e-11!4;UBERON:0000204!2.71e-11!4;UBERON:0010082!2.71e-11!4;UBERON:0006331!1.44e-10!3;UBERON:0000988!2.66e-10!3;UBERON:0001896!3.73e-10!3;UBERON:0005290!3.73e-10!3;UBERON:0010096!3.73e-10!3;UBERON:0002240!4.34e-10!3;UBERON:0001872!5.25e-10!5;UBERON:0000349!3.13e-09!5;UBERON:0000477!4.79e-09!286;UBERON:0002771!5.26e-09!3;UBERON:0005383!6.42e-09!3;UBERON:0005382!6.42e-09!3;UBERON:0001871!1.22e-08!7;UBERON:0002680!1.96e-08!9;UBERON:0001895!1.96e-08!9;UBERON:0010092!1.96e-08!9;UBERON:0000475!4.20e-08!365;UBERON:0002148!1.57e-07!2;UBERON:0009662!1.57e-07!2;UBERON:0001897!2.14e-07!2;UBERON:0001875!2.14e-07!2;UBERON:0006514!2.14e-07!2;UBERON:0005162!2.91e-07!2;UBERON:0000122!2.91e-07!2;UBERON:0000062!6.38e-07!511;UBERON:0001870!6.57e-07!2;UBERON:0001954!9.92e-07!2;UBERON:0003022!9.92e-07!2;UBERON:0002421!9.92e-07!2;UBERON:0002600!9.92e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!8.85e-73!57;UBERON:0005068!8.85e-73!57;UBERON:0006241!8.85e-73!57;UBERON:0007135!8.85e-73!57;UBERON:0002616!1.07e-58!59;UBERON:0001017!3.19e-55!82;UBERON:0005743!9.22e-55!86;UBERON:0000955!5.61e-54!69;UBERON:0006238!5.61e-54!69;UBERON:0002780!1.70e-51!41;UBERON:0001890!1.70e-51!41;UBERON:0006240!1.70e-51!41;UBERON:0000073!2.66e-51!94;UBERON:0001016!2.66e-51!94;UBERON:0007023!3.55e-50!115;UBERON:0003080!4.16e-50!42;UBERON:0002020!4.35e-50!34;UBERON:0003528!4.35e-50!34;UBERON:0003075!5.38e-50!86;UBERON:0007284!5.38e-50!86;UBERON:0001893!1.24e-49!34;UBERON:0002346!2.65e-47!90;UBERON:0002791!3.21e-47!33;UBERON:0001869!2.40e-44!32;UBERON:0003056!1.24e-34!61;UBERON:0002619!2.54e-32!22;UBERON:0000033!5.04e-31!123;UBERON:0000153!4.23e-29!129;UBERON:0007811!4.23e-29!129;UBERON:0004121!2.85e-28!169;UBERON:0000956!4.49e-28!25;UBERON:0000203!4.49e-28!25;UBERON:0001950!1.27e-27!20;UBERON:0000924!2.37e-27!173;UBERON:0006601!2.37e-27!173;UBERON:0002308!8.72e-26!9;UBERON:0000125!8.72e-26!9;UBERON:0003076!5.34e-23!15;UBERON:0003057!5.34e-23!15;UBERON:0009663!5.76e-20!7;UBERON:0002420!1.02e-19!9;UBERON:0007245!1.02e-19!9;UBERON:0010009!1.02e-19!9;UBERON:0010011!1.02e-19!9;UBERON:0000454!1.02e-19!9;UBERON:0002298!7.00e-19!8;UBERON:0004732!5.59e-18!13;UBERON:0000200!5.89e-17!6;UBERON:0000025!3.14e-16!194;UBERON:0004733!1.90e-15!12;UBERON:0002028!1.90e-15!12;UBERON:0007277!1.90e-15!12;UBERON:0000064!1.02e-12!219;UBERON:0000483!1.77e-12!309;UBERON:0000119!3.05e-12!312;UBERON:0004111!7.62e-12!241;UBERON:0000369!2.71e-11!4;UBERON:0002435!2.71e-11!4;UBERON:0000204!2.71e-11!4;UBERON:0010082!2.71e-11!4;UBERON:0006331!1.44e-10!3;UBERON:0000988!2.66e-10!3;UBERON:0001896!3.73e-10!3;UBERON:0005290!3.73e-10!3;UBERON:0010096!3.73e-10!3;UBERON:0002240!4.34e-10!3;UBERON:0001872!5.25e-10!5;UBERON:0000349!3.13e-09!5;UBERON:0000477!4.79e-09!286;UBERON:0002771!5.26e-09!3;UBERON:0005383!6.42e-09!3;UBERON:0005382!6.42e-09!3;UBERON:0001871!1.22e-08!7;UBERON:0002680!1.96e-08!9;UBERON:0001895!1.96e-08!9;UBERON:0010092!1.96e-08!9;UBERON:0000475!4.20e-08!365;UBERON:0002148!1.57e-07!2;UBERON:0009662!1.57e-07!2;UBERON:0001897!2.14e-07!2;UBERON:0001875!2.14e-07!2;UBERON:0006514!2.14e-07!2;UBERON:0005162!2.91e-07!2;UBERON:0000122!2.91e-07!2;UBERON:0000062!6.38e-07!511;UBERON:0001870!6.57e-07!2;UBERON:0001954!9.92e-07!2;UBERON:0003022!9.92e-07!2;UBERON:0002421!9.92e-07!2;UBERON:0002600!9.92e-07!2 | ||
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| ||
|short_description=p1@FAM209A | |short_description=p1@FAM209A | ||
}} | }} |
Latest revision as of 03:20, 17 September 2015
Short description: | p1@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM209A_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -308bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.40e-29 | 10 |
melanoblast | 5.40e-29 | 10 |
pigment cell | 1.80e-20 | 14 |
light melanocyte | 3.67e-19 | 3 |
neurecto-epithelial cell | 4.57e-14 | 20 |
columnar/cuboidal epithelial cell | 3.46e-10 | 27 |
ecto-epithelial cell | 6.65e-08 | 34 |
dark melanocyte | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|