FFCP PHASE1:Hg19::chr7:150813432..150813463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116988 | |EntrezGene=116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |HGNC=16923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000473140_5end | |association_with_transcript=38bp_to_ENST00000473140_5end | ||
|cluster_id=chr7:150813432..150813463,+ | |||
|description=CAGE_peak_9_at_AGAP3_5end | |description=CAGE_peak_9_at_AGAP3_5end | ||
|id=chr7:150813432..150813463,+ | |id=chr7:150813432..150813463,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.47e-27!254;CL:0002076!3.36e-26!43;CL:0000223!1.26e-19!59;CL:0002368!1.12e-16!13;CL:0002251!7.96e-11!21;CL:0002202!3.98e-10!9;CL:0002632!3.98e-10!9;CL:0000076!3.78e-09!62;CL:0000244!9.19e-09!4;CL:0000731!9.19e-09!4;CL:0000077!4.29e-07!19;CL:0002328!8.13e-07!3 | |ontology_enrichment_celltype=CL:0000066!5.47e-27!254;CL:0002076!3.36e-26!43;CL:0000223!1.26e-19!59;CL:0002368!1.12e-16!13;CL:0002251!7.96e-11!21;CL:0002202!3.98e-10!9;CL:0002632!3.98e-10!9;CL:0000076!3.78e-09!62;CL:0000244!9.19e-09!4;CL:0000731!9.19e-09!4;CL:0000077!4.29e-07!19;CL:0002328!8.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.79e-30;13!CL:0000244;5.29e-21;4!CL:0000731;5.29e-21;4!CL:0002076;1.23e-17;42!CL:0002202;3.66e-14;9!CL:0002632;3.66e-14;9!CL:0002159;3.97e-12;14!CL:0002327;1.14e-11;4!CL:0000312;1.97e-09;5!CL:0000362;6.88e-09;9!CL:0002328;6.13e-08;3!CL:0000240;6.18e-08;6!CL:0000311;6.18e-08;6!CL:0000079;6.18e-08;6!CL:0000237;6.18e-08;6!CL:0002231;1.43e-07;3!CL:0000307;1.43e-07;3!CL:0002621;1.43e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;2.79e-30;13!CL:0000244;5.29e-21;4!CL:0000731;5.29e-21;4!CL:0002076;1.23e-17;42!CL:0002202;3.66e-14;9!CL:0002632;3.66e-14;9!CL:0002159;3.97e-12;14!CL:0002327;1.14e-11;4!CL:0000312;1.97e-09;5!CL:0000362;6.88e-09;9!CL:0002328;6.13e-08;3!CL:0000240;6.18e-08;6!CL:0000311;6.18e-08;6!CL:0000079;6.18e-08;6!CL:0000237;6.18e-08;6!CL:0002231;1.43e-07;3!CL:0000307;1.43e-07;3!CL:0002621;1.43e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.53e-30,13;CL:0002076,8.83e-24,42;CL:0000244,3.61e-21,4;CL:0000731,3.61e-21,4;CL:0000066,2.55e-20,253;CL:0000223,2.59e-16,58;CL:0002202,3.38e-14,9;CL:0002632,3.38e-14,9;CL:0002159,5.39e-12,14;CL:0002327,8.50e-12,4;CL:0000312,1.97e-09,5;CL:0000362,7.34e-09,9;CL:0002328,4.66e-08,3;CL:0000240,6.19e-08,6;CL:0000311,6.19e-08,6;CL:0000079,6.19e-08,6;CL:0000237,6.19e-08,6;CL:0000036,6.19e-08,6;CL:0000357,6.19e-08,6;CL:0000114,6.19e-08,6;CL:0002321,9.09e-08,250;CL:0002621,1.17e-07,3;CL:0002231,1.58e-07,3;CL:0000068,1.63e-07,3;CL:0000069,1.63e-07,3;CL:0000307,1.63e-07,3;CL:0000377,1.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.53e-10;58!CL:0000357;6.18e-08;6!CL:0000114;6.18e-08;6!CL:0000377;1.43e-07;3!UBERON:0000358;8.57e-07;1 | |ontology_enrichment_development_v019=CL:0000223;2.53e-10;58!CL:0000357;6.18e-08;6!CL:0000114;6.18e-08;6!CL:0000377;1.43e-07;3!UBERON:0000358;8.57e-07;1 | ||
|ontology_enrichment_disease=DOID:305!7.09e-09!106 | |ontology_enrichment_disease=DOID:305!7.09e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:178;8.57e-07;1!DOID:326;8.57e-07;1!DOID:3978;8.57e-07;1!DOID:3394;8.57e-07;1!DOID:5844;8.57e-07;1 | |ontology_enrichment_disease_v019=DOID:178;8.57e-07;1!DOID:326;8.57e-07;1!DOID:3978;8.57e-07;1!DOID:3394;8.57e-07;1!DOID:5844;8.57e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,9.30e-07,1;DOID:326,9.30e-07,1;DOID:3978,9.30e-07,1;DOID:3394,9.30e-07,1;DOID:5844,9.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-16!169;UBERON:0000925!3.15e-16!169;UBERON:0006595!3.15e-16!169;UBERON:0001004!6.48e-14!72;UBERON:0000161!1.67e-11!35;UBERON:0001007!9.98e-11!155;UBERON:0001555!9.98e-11!155;UBERON:0007026!9.98e-11!155;UBERON:0000365!4.38e-10!5;UBERON:0000065!2.22e-09!53;UBERON:0000344!2.37e-09!12;UBERON:0005910!2.71e-08!6;UBERON:0000077!3.80e-08!130;UBERON:0004921!4.03e-08!129;UBERON:0004185!4.03e-08!129;UBERON:0007196!1.03e-07!14;UBERON:0001558!1.03e-07!14;UBERON:0000166!1.07e-07!21;UBERON:0003729!1.17e-07!5;UBERON:0006554!2.32e-07!44;UBERON:0005911!3.05e-07!82;UBERON:0001008!4.19e-07!45;UBERON:0008947!5.95e-07!38;UBERON:0003258!5.95e-07!38;UBERON:0004815!8.13e-07!3;UBERON:0002031!8.13e-07!3;UBERON:0005153!9.37e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!3.15e-16!169;UBERON:0000925!3.15e-16!169;UBERON:0006595!3.15e-16!169;UBERON:0001004!6.48e-14!72;UBERON:0000161!1.67e-11!35;UBERON:0001007!9.98e-11!155;UBERON:0001555!9.98e-11!155;UBERON:0007026!9.98e-11!155;UBERON:0000365!4.38e-10!5;UBERON:0000065!2.22e-09!53;UBERON:0000344!2.37e-09!12;UBERON:0005910!2.71e-08!6;UBERON:0000077!3.80e-08!130;UBERON:0004921!4.03e-08!129;UBERON:0004185!4.03e-08!129;UBERON:0007196!1.03e-07!14;UBERON:0001558!1.03e-07!14;UBERON:0000166!1.07e-07!21;UBERON:0003729!1.17e-07!5;UBERON:0006554!2.32e-07!44;UBERON:0005911!3.05e-07!82;UBERON:0001008!4.19e-07!45;UBERON:0008947!5.95e-07!38;UBERON:0003258!5.95e-07!38;UBERON:0004815!8.13e-07!3;UBERON:0002031!8.13e-07!3;UBERON:0005153!9.37e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.75e-17;5!UBERON:0000486;8.13e-15;12!UBERON:0005910;4.71e-14;6!UBERON:0001911;1.14e-11;4!UBERON:0005911;5.30e-10;36!UBERON:0007196;2.17e-08;15!UBERON:0001558;2.17e-08;15!UBERON:0004815;6.13e-08;3!UBERON:0002031;6.13e-08;3!UBERON:0004807;7.24e-08;22!UBERON:0001949;1.43e-07;3!UBERON:0000065;1.91e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0000365;7.75e-17;5!UBERON:0000486;8.13e-15;12!UBERON:0005910;4.71e-14;6!UBERON:0001911;1.14e-11;4!UBERON:0005911;5.30e-10;36!UBERON:0007196;2.17e-08;15!UBERON:0001558;2.17e-08;15!UBERON:0004815;6.13e-08;3!UBERON:0002031;6.13e-08;3!UBERON:0004807;7.24e-08;22!UBERON:0001949;1.43e-07;3!UBERON:0000065;1.91e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.73e-17,5;UBERON:0005910,3.66e-14,6;UBERON:0005153,6.01e-12,37;UBERON:0001911,8.50e-12,4;UBERON:0005333,8.50e-12,4;UBERON:0008425,8.50e-12,4;UBERON:0005311,8.50e-12,4;UBERON:0005157,6.88e-11,47;UBERON:0005911,2.89e-09,82;UBERON:0004119,3.48e-09,160;UBERON:0000925,3.48e-09,160;UBERON:0006595,3.48e-09,160;UBERON:0007196,2.07e-08,15;UBERON:0001558,2.07e-08,15;UBERON:0004815,4.66e-08,3;UBERON:0002031,4.66e-08,3;UBERON:0001949,1.17e-07,3;UBERON:0000065,1.36e-07,54;UBERON:0001004,1.84e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,3.48900583986214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,3.91567694411725,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,2.72746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.63400684980701,1.1240175325762,1.60846355858609,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,2.18376766658517,0.992425680696705,1.16426079513703,1.74380363108377,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,1.38121483403844,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.32227932288782,2.30628080838127,8.67766444963172,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,2.68120910214315,1.08890984861323,0.0941438007767792,4.73555909938353,3.36942951335251,2.66058092122005,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0.230850775511391,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99187398170801,0.0979923974143777,0,0,0,0,0,0,1.16386819786103,0,0,0,0,0,1.95551382734803,0,0,0,0,0,0,0,0,2.35694034616795,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,4.19325901047881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,2.57329909649911,0,0.226705925512272,0,0,0,2.47041157728778,0.877136198314828,0,2.12205442098006,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,2.23807212351111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.739280431085226,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,4.25497827182286,0.111231401892069,0.549451649953598,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0.6828739083758,0,0.860454717640555,0,0,0,1.14553434272025,0,0,0.223710863595585,0.392600934460972,2.92603019957447,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0.606168477131288,0.645499848534087,0,0.407016343054873,0,0,0,4.69281884806909,0,0.406896178315738,0,0,0 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| ||
|short_description=p9@AGAP3 | |short_description=p9@AGAP3 | ||
}} | }} |
Latest revision as of 05:52, 17 September 2015
Short description: | p9@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AGAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000473140_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.53e-30 | 13 |
endo-epithelial cell | 8.83e-24 | 42 |
transitional epithelial cell | 3.61e-21 | 4 |
urothelial cell | 3.61e-21 | 4 |
epithelial cell | 2.55e-20 | 253 |
endodermal cell | 2.59e-16 | 58 |
epithelial cell of tracheobronchial tree | 3.38e-14 | 9 |
epithelial cell of lower respiratory tract | 3.38e-14 | 9 |
general ecto-epithelial cell | 5.39e-12 | 14 |
mammary gland epithelial cell | 8.50e-12 | 4 |
keratinocyte | 1.97e-09 | 5 |
epidermal cell | 7.34e-09 | 9 |
bronchial epithelial cell | 4.66e-08 | 3 |
stratified squamous epithelial cell | 6.19e-08 | 6 |
keratin accumulating cell | 6.19e-08 | 6 |
stratified epithelial cell | 6.19e-08 | 6 |
keratinizing barrier epithelial cell | 6.19e-08 | 6 |
epithelial fate stem cell | 6.19e-08 | 6 |
stratified epithelial stem cell | 6.19e-08 | 6 |
surface ectodermal cell | 6.19e-08 | 6 |
embryonic cell | 9.09e-08 | 250 |
gingival epithelial cell | 1.17e-07 | 3 |
epithelial cell of prostate | 1.58e-07 | 3 |
duct epithelial cell | 1.63e-07 | 3 |
branched duct epithelial cell | 1.63e-07 | 3 |
tracheal epithelial cell | 1.63e-07 | 3 |
tracheoblast | 1.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.73e-17 | 5 |
transitional epithelium | 3.66e-14 | 6 |
epithelial bud | 6.01e-12 | 37 |
mammary gland | 8.50e-12 | 4 |
mammary bud | 8.50e-12 | 4 |
mammary ridge | 8.50e-12 | 4 |
mammary placode | 8.50e-12 | 4 |
epithelial fold | 6.88e-11 | 47 |
endo-epithelium | 2.89e-09 | 82 |
endoderm-derived structure | 3.48e-09 | 160 |
endoderm | 3.48e-09 | 160 |
presumptive endoderm | 3.48e-09 | 160 |
tracheobronchial tree | 2.07e-08 | 15 |
lower respiratory tract | 2.07e-08 | 15 |
lower respiratory tract epithelium | 4.66e-08 | 3 |
epithelium of bronchus | 4.66e-08 | 3 |
gingival epithelium | 1.17e-07 | 3 |
respiratory tract | 1.36e-07 | 54 |
respiratory system | 1.84e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 9.30e-07 | 1 |
ischemia | 9.30e-07 | 1 |
extrinsic cardiomyopathy | 9.30e-07 | 1 |
myocardial ischemia | 9.30e-07 | 1 |
myocardial infarction | 9.30e-07 | 1 |