FFCP PHASE1:Hg19::chr1:28503164..28503175,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:28503164..28503175,-
|short_description=p4@PTAFR
|description=CAGE_peak_4_at_PTAFR_5end
|association_with_transcript=15bp_to_uc001bpl.2_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc001bpl.2_5end | |||
|cluster_id=chr1:28503164..28503175,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_PTAFR_5end | |||
|id=chr1:28503164..28503175,- | |||
|ontology_enrichment_celltype=CL:0000766!1.19e-60!76;CL:0000839!3.49e-49!70;CL:0002194!7.12e-49!63;CL:0000576!7.12e-49!63;CL:0000040!7.12e-49!63;CL:0000559!7.12e-49!63;CL:0000557!3.63e-48!71;CL:0002009!1.05e-46!65;CL:0000763!9.13e-46!112;CL:0000049!9.13e-46!112;CL:0002057!4.49e-45!42;CL:0000738!3.31e-43!140;CL:0000860!1.48e-42!45;CL:0000037!1.08e-40!172;CL:0000566!1.08e-40!172;CL:0002032!4.77e-39!165;CL:0000837!4.77e-39!165;CL:0002087!3.27e-37!119;CL:0000988!1.33e-36!182;CL:0002031!7.73e-36!124;CL:0000094!2.17e-10!8;CL:0002393!5.88e-09!9;CL:0002397!5.88e-09!9;CL:0000081!6.42e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-56;33!CL:0002057;1.21e-56;33!CL:0000473;1.74e-56;39!CL:0000234;1.74e-56;39!CL:0000576;1.11e-42;48!CL:0000766;2.31e-38;69!CL:0000763;3.00e-20;100!CL:0000094;1.91e-16;8!CL:0000738;1.71e-15;136!CL:0002087;2.42e-14;104!CL:0000235;2.68e-12;6!CL:0000081;1.76e-11;11!CL:0000988;2.72e-08;177!CL:0002393;9.79e-08;6!CL:0002397;9.79e-08;6!CL:0002619;1.92e-07;3!CL:0000775;2.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.36e-95,72;CL:0002194,4.93e-78,59;CL:0000576,4.93e-78,59;CL:0000040,4.93e-78,59;CL:0000559,4.93e-78,59;CL:0000473,3.30e-77,48;CL:0000234,3.30e-77,48;CL:0000839,9.91e-77,66;CL:0000557,2.36e-75,67;CL:0002009,5.41e-75,61;CL:0000763,2.65e-68,108;CL:0000049,2.65e-68,108;CL:0000860,4.90e-66,42;CL:0002057,4.90e-66,42;CL:0000738,2.54e-63,136;CL:0000037,2.04e-55,168;CL:0002032,1.25e-53,161;CL:0000837,1.25e-53,161;CL:0002087,4.19e-53,115;CL:0000988,1.58e-51,177;CL:0002031,3.65e-50,120;CL:0000094,1.78e-16,8;CL:0000134,4.31e-16,354;CL:0002320,2.18e-15,361;CL:0000219,6.27e-13,386;CL:0000235,3.42e-12,6;CL:0000081,1.67e-11,11;CL:0000034,4.51e-10,441;CL:0000048,5.69e-10,427;CL:0000723,1.44e-09,433;CL:0000775,1.81e-07,3;CL:0002619,1.88e-07,3;CL:0002393,5.46e-07,9;CL:0002397,5.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-47;42!CL:0000049;6.80e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.18e-52!102;UBERON:0003061!2.18e-52!102;UBERON:0002193!8.18e-48!112;UBERON:0002371!1.11e-41!80;UBERON:0001474!3.55e-37!86;UBERON:0002405!3.43e-30!115;UBERON:0004765!2.46e-29!101;UBERON:0001434!2.46e-29!101;UBERON:0007023!1.25e-27!115;UBERON:0003081!2.50e-16!216;UBERON:0002204!6.94e-12!167;UBERON:0000178!8.64e-11!15;UBERON:0000179!8.64e-11!15;UBERON:0000463!8.64e-11!15;UBERON:0001049!9.74e-10!57;UBERON:0005068!9.74e-10!57;UBERON:0006241!9.74e-10!57;UBERON:0007135!9.74e-10!57;UBERON:0002616!1.58e-07!59;UBERON:0002298!5.23e-07!8;UBERON:0002020!9.02e-07!34;UBERON:0003528!9.02e-07!34;UBERON:0001893!9.79e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-18;15!UBERON:0000179;3.28e-18;15!UBERON:0000463;3.28e-18;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.90e-76,98;UBERON:0003061,8.90e-76,98;UBERON:0002193,4.97e-67,108;UBERON:0002371,1.41e-64,76;UBERON:0001474,1.06e-58,82;UBERON:0004765,4.47e-52,90;UBERON:0002405,6.94e-50,93;UBERON:0001434,2.77e-45,100;UBERON:0003081,3.53e-30,203;UBERON:0002204,7.03e-22,167;UBERON:0000178,3.93e-18,15;UBERON:0000179,3.93e-18,15;UBERON:0000463,3.93e-18,15;UBERON:0002384,1.96e-14,371;UBERON:0000926,3.35e-14,315;UBERON:0004120,3.35e-14,315;UBERON:0006603,3.35e-14,315 | |||
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| ||
|short_description=p4@PTAFR | |||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p4@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTAFR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 15bp_to_uc001bpl.2_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.90e-76 | 98 |
blood island | 8.90e-76 | 98 |
hemolymphoid system | 4.97e-67 | 108 |
bone marrow | 1.41e-64 | 76 |
bone element | 1.06e-58 | 82 |
skeletal element | 4.47e-52 | 90 |
immune system | 6.94e-50 | 93 |
skeletal system | 2.77e-45 | 100 |
lateral plate mesoderm | 3.53e-30 | 203 |
musculoskeletal system | 7.03e-22 | 167 |
blood | 3.93e-18 | 15 |
haemolymphatic fluid | 3.93e-18 | 15 |
organism substance | 3.93e-18 | 15 |
connective tissue | 1.96e-14 | 371 |
mesoderm | 3.35e-14 | 315 |
mesoderm-derived structure | 3.35e-14 | 315 |
presumptive mesoderm | 3.35e-14 | 315 |