FFCP PHASE1:Hg19::chr1:28503176..28503208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001bpl.2_5end | |association_with_transcript=0bp_to_uc001bpl.2_5end | ||
|cluster_id=chr1:28503176..28503208,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_PTAFR_5end | |description=CAGE_peak_1_at_PTAFR_5end | ||
|id=chr1:28503176..28503208,- | |id=chr1:28503176..28503208,- | ||
|ontology_enrichment_celltype=CL:0000037!9.67e-51!172;CL:0000566!9.67e-51!172;CL:0000766!6.50e-49!76;CL:0000763!9.86e-49!112;CL:0000049!9.86e-49!112;CL:0002032!4.01e-48!165;CL:0000837!4.01e-48!165;CL:0000988!3.77e-45!182;CL:0000738!1.06e-44!140;CL:0000557!4.23e-42!71;CL:0000839!4.49e-42!70;CL:0002009!8.85e-39!65;CL:0002194!1.37e-38!63;CL:0000576!1.37e-38!63;CL:0000040!1.37e-38!63;CL:0000559!1.37e-38!63;CL:0002031!1.54e-38!124;CL:0002087!1.04e-36!119;CL:0002057!1.29e-36!42;CL:0000860!9.30e-33!45;CL:0000094!3.11e-08!8;CL:0002393!1.00e-07!9;CL:0002397!1.00e-07!9;CL:0000945!3.19e-07!24;CL:0000826!3.19e-07!24 | |ontology_enrichment_celltype=CL:0000037!9.67e-51!172;CL:0000566!9.67e-51!172;CL:0000766!6.50e-49!76;CL:0000763!9.86e-49!112;CL:0000049!9.86e-49!112;CL:0002032!4.01e-48!165;CL:0000837!4.01e-48!165;CL:0000988!3.77e-45!182;CL:0000738!1.06e-44!140;CL:0000557!4.23e-42!71;CL:0000839!4.49e-42!70;CL:0002009!8.85e-39!65;CL:0002194!1.37e-38!63;CL:0000576!1.37e-38!63;CL:0000040!1.37e-38!63;CL:0000559!1.37e-38!63;CL:0002031!1.54e-38!124;CL:0002087!1.04e-36!119;CL:0002057!1.29e-36!42;CL:0000860!9.30e-33!45;CL:0000094!3.11e-08!8;CL:0002393!1.00e-07!9;CL:0002397!1.00e-07!9;CL:0000945!3.19e-07!24;CL:0000826!3.19e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-29;33!CL:0002057;1.30e-29;33!CL:0000473;2.75e-29;39!CL:0000234;2.75e-29;39!CL:0000576;9.43e-25;48!CL:0000766;6.37e-23;69!CL:0000763;1.79e-15;100!CL:0002087;3.78e-11;104!CL:0000738;9.31e-11;136!CL:0000094;9.49e-09;8!CL:0000988;9.75e-08;177!CL:0000235;8.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.27e-55,72;CL:0000763,4.37e-49,108;CL:0000049,4.37e-49,108;CL:0000839,7.88e-48,66;CL:0000037,1.33e-47,168;CL:0000557,1.18e-46,67;CL:0002032,1.29e-45,161;CL:0000837,1.29e-45,161;CL:0000473,6.94e-45,48;CL:0000234,6.94e-45,48;CL:0000738,1.16e-44,136;CL:0002194,3.84e-44,59;CL:0000576,3.84e-44,59;CL:0000040,3.84e-44,59;CL:0000559,3.84e-44,59;CL:0002009,4.19e-43,61;CL:0000988,6.35e-43,177;CL:0002031,1.60e-39,120;CL:0000860,2.29e-39,42;CL:0002057,2.29e-39,42;CL:0002087,1.24e-37,115;CL:0000094,9.35e-09,8;CL:0002393,3.30e-08,9;CL:0002397,3.30e-08,9;CL:0000235,8.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-28;42!CL:0000049;2.75e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-46!115;UBERON:0002390!1.84e-42!102;UBERON:0003061!1.84e-42!102;UBERON:0002193!5.31e-38!112;UBERON:0002371!2.44e-35!80;UBERON:0001474!7.13e-31!86;UBERON:0002405!1.69e-25!115;UBERON:0004765!9.11e-24!101;UBERON:0001434!9.11e-24!101;UBERON:0001049!1.54e-16!57;UBERON:0005068!1.54e-16!57;UBERON:0006241!1.54e-16!57;UBERON:0007135!1.54e-16!57;UBERON:0003080!4.45e-13!42;UBERON:0002780!9.77e-13!41;UBERON:0001890!9.77e-13!41;UBERON:0006240!9.77e-13!41;UBERON:0002616!1.85e-12!59;UBERON:0003081!1.10e-11!216;UBERON:0001893!2.12e-10!34;UBERON:0002020!2.30e-10!34;UBERON:0003528!2.30e-10!34;UBERON:0002791!4.85e-10!33;UBERON:0000955!8.97e-10!69;UBERON:0006238!8.97e-10!69;UBERON:0001017!1.44e-09!82;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0001869!2.68e-09!32;UBERON:0000479!4.21e-09!787;UBERON:0005743!5.36e-09!86;UBERON:0002204!1.17e-08!167;UBERON:0002619!2.07e-08!22;UBERON:0002346!2.33e-08!90;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0001950!2.01e-07!20;UBERON:0000073!2.51e-07!94;UBERON:0001016!2.51e-07!94;UBERON:0000956!9.89e-07!25;UBERON:0000203!9.89e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!5.18e-46!115;UBERON:0002390!1.84e-42!102;UBERON:0003061!1.84e-42!102;UBERON:0002193!5.31e-38!112;UBERON:0002371!2.44e-35!80;UBERON:0001474!7.13e-31!86;UBERON:0002405!1.69e-25!115;UBERON:0004765!9.11e-24!101;UBERON:0001434!9.11e-24!101;UBERON:0001049!1.54e-16!57;UBERON:0005068!1.54e-16!57;UBERON:0006241!1.54e-16!57;UBERON:0007135!1.54e-16!57;UBERON:0003080!4.45e-13!42;UBERON:0002780!9.77e-13!41;UBERON:0001890!9.77e-13!41;UBERON:0006240!9.77e-13!41;UBERON:0002616!1.85e-12!59;UBERON:0003081!1.10e-11!216;UBERON:0001893!2.12e-10!34;UBERON:0002020!2.30e-10!34;UBERON:0003528!2.30e-10!34;UBERON:0002791!4.85e-10!33;UBERON:0000955!8.97e-10!69;UBERON:0006238!8.97e-10!69;UBERON:0001017!1.44e-09!82;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0001869!2.68e-09!32;UBERON:0000479!4.21e-09!787;UBERON:0005743!5.36e-09!86;UBERON:0002204!1.17e-08!167;UBERON:0002619!2.07e-08!22;UBERON:0002346!2.33e-08!90;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0001950!2.01e-07!20;UBERON:0000073!2.51e-07!94;UBERON:0001016!2.51e-07!94;UBERON:0000956!9.89e-07!25;UBERON:0000203!9.89e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.39e-12;114!UBERON:0002780;7.68e-09;41!UBERON:0001890;7.68e-09;41!UBERON:0001893;1.03e-08;34!UBERON:0003528;1.15e-08;34!UBERON:0002020;1.15e-08;34!UBERON:0002791;1.47e-08;32!UBERON:0000178;1.60e-08;15!UBERON:0000179;1.60e-08;15!UBERON:0000463;1.60e-08;15!UBERON:0000073;1.65e-08;53!UBERON:0002616;1.65e-08;53!UBERON:0002619;2.88e-08;22!UBERON:0001869;3.03e-08;32!UBERON:0001950;3.20e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.79e-47,98;UBERON:0003061,3.79e-47,98;UBERON:0007023,1.79e-44,114;UBERON:0002193,2.06e-42,108;UBERON:0002371,2.75e-39,76;UBERON:0002405,1.79e-34,93;UBERON:0001474,1.86e-34,82;UBERON:0004765,4.43e-29,90;UBERON:0001434,1.41e-24,100;UBERON:0003081,1.11e-15,203;UBERON:0001049,1.77e-15,56;UBERON:0005068,1.77e-15,56;UBERON:0006241,1.77e-15,56;UBERON:0007135,1.77e-15,56;UBERON:0000073,7.86e-14,53;UBERON:0002616,7.86e-14,53;UBERON:0002780,1.22e-11,41;UBERON:0001890,1.22e-11,41;UBERON:0003080,1.22e-11,41;UBERON:0006240,1.22e-11,41;UBERON:0000479,7.88e-11,773;UBERON:0001893,1.47e-10,34;UBERON:0003528,1.60e-10,34;UBERON:0002020,1.60e-10,34;UBERON:0002791,1.37e-09,32;UBERON:0001869,2.15e-09,32;UBERON:0002204,3.07e-09,167;UBERON:0000955,3.24e-09,68;UBERON:0006238,3.24e-09,68;UBERON:0001017,7.92e-09,81;UBERON:0003075,1.52e-08,82;UBERON:0007284,1.52e-08,82;UBERON:0000178,1.63e-08,15;UBERON:0000179,1.63e-08,15;UBERON:0000463,1.63e-08,15;UBERON:0002619,2.97e-08,22;UBERON:0002346,1.41e-07,86;UBERON:0001016,3.06e-07,89;UBERON:0001950,3.27e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0,39.123663742951,29.7204133808804,34.9475869032736,86.5401409067589,61.7965330936512,61.4620009564822,0,0,0,0.852139206383318,14.9277694111793,4.11040615068786,53.1835592190602,73.8003566690121,79.4259786820018,119.79477871836,112.391102108586,111.530220785603,145.107442302006,119.408798205664,142.396843917248,206.629413809154,115.127008646111,148.968764400545,275.321619452298,256.929188648688,273.136975521316,127.900647553285,92.3043097524871,135.426486594342,147.581994201402,85.4196249681057,120.67651114701,85.0913220791109,70.9253149838167,105.490625756842,327.212489785222,281.842148219366,332.455305415501,262.058942481611,317.168340602347,401.09752835315,193.461472247692,186.169401876012,210.021612829848,232.473409011214,254.479846467407,327.855033388756,39.0822279677092,28.2763718953508,41.0930945196417,71.2163521468779,68.4806631357269,80.8449701086313,17.1007646244749,10.94041724595,18.6317436839927,0,4.36910889009705,1.77901850772711,7.68114400619713,7.20712776664822,2.29900975981793,4.62731410949403,0,2.27685187643779,3.52342313622563,1.91136614062614,0,10.6496626966492,3.68737718685108,0.590129310341499,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,2.86708872891687,0,0,7.67933107296641,2.43174561193395,2.49861453104692,11.8388626022008,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43917392846563,5.76307932189936,0,0,28.8847180352668,39.8757098415322,42.2806314449991,4.76981248610684,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.733829959145,275.323987545311,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,5.89696330006576,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,133.695834305457,61.3091174664803,123.661127024222,0,0,0,0,0,0,2.46331618947972,67.9733910582105,16.1715930121802,23.2033125001308,22.0924258496165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,111.893878189895,124.057501583735,139.150400058801,0,0,0,0,0,0,0,2.1673383622212,0,2.43851768931522,0,0,0,0.502548796003046,0,160.287503124697,158.555573378133,152.090493431025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2256991869923,34.9457005326159,23.1598800433474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.5686127061494,0,0,0,7.62503486193145,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,7.71979166369589,0,0,0,0,153.756625597347,148.339618185621,162.91909553181,93.1486242039955,118.88369692191,165.360694354143,141.488236556386,147.521282790734,0,0,0,0.185803175125719,0,0,0,0.199579371432817,16.8524725716483,1.90506224451495,0.324621940274555,1.12318871245384,1.36940807419915,0.313359791546046,10.0253790836027,2.53937666702405,38.2199618746805,31.4807543218034,38.3261613921294,8.58763361889412,0,0.447352215784832,0.500547425135725,45.9162024194795,0,0,4.05683517713975,0,1.4098700508785,0,9.669539831945,0,0,0,0,1.48482340416319,0,3.97659059106519,10.1281979815569,0,0,0,4.5827037297746,5.8019622261541,0,0,8.24668196589166,0,0,0,0.511572370226872,1.67693789582787,33.5276329285716,0,5.81599647657131,5.65885398787293,0,0,0,2.89999830173917,0,0,0,0,0,0,1.77148277162768,7.71817207202611,1.52581736317083,2.21158519862449,2.06883333267483,1.53569778007781,0,0,1.76985594558733,0,0,0,0,0.957003479195758,0.457987967009312,5.33034776018635,0,2.5116841023204,3.15802195610297,0,0,0,0,2.38404868470568,0,0,0,0,0,2.74218449960351,2.4441205797345,0,0,0,18.9397183675702,5.61804353109152,10.7761645033656,10.0350134068616,0,0,0.394584402849391,2.41981432097328,2.14250933141343,10.741718536843,0,0,0,0,0,0,0,0,0,0,0,5.2418000472609,0,0,0,0,1.64881328030313,0,2.71176888936639,0,0,4.81162049264678,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,5.4037825983881,16.8393616037151,1.27746588066972,0,0,0.837847203816763,1.83328339209347,1.43574604915363,2.39614800598789,5.15071257763885,2.4548860318606,1.88113722962834,0,0,0,0,0,0,22.9464729898276,5.56660782866512,12.8031201744881,0,0,0,1.349843349309,0.77380195455795,6.25720433577654,0,1.57611414598396,2.15063811353492,0,0,0,5.71756261098694,7.94510364438518,0,0,0,0,0,0.328370082997356,0,0,2.78449243988357,5.30027555648885,3.49063982176186,11.7687015550994,0,0,15.5909622348834,6.60258081418597,19.4692356013182,21.8313049597258,0.790446527591777,0.60896299190448,0,0,0.7520696820681,0,0,0,0,1.70836770862748,7.88702863450949,3.44045517414043,15.0863510090119,10.3080028882697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.01898929680038,0,0,0,0,0,0,0,2.02714286418868,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36758730655925,0,7.1835236575718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| ||
|short_description=p1@PTAFR | |short_description=p1@PTAFR | ||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p1@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTAFR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_uc001bpl.2_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.27e-55 | 72 |
myeloid cell | 4.37e-49 | 108 |
common myeloid progenitor | 4.37e-49 | 108 |
myeloid lineage restricted progenitor cell | 7.88e-48 | 66 |
hematopoietic stem cell | 1.33e-47 | 168 |
granulocyte monocyte progenitor cell | 1.18e-46 | 67 |
hematopoietic oligopotent progenitor cell | 1.29e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-45 | 161 |
defensive cell | 6.94e-45 | 48 |
phagocyte | 6.94e-45 | 48 |
leukocyte | 1.16e-44 | 136 |
monopoietic cell | 3.84e-44 | 59 |
monocyte | 3.84e-44 | 59 |
monoblast | 3.84e-44 | 59 |
promonocyte | 3.84e-44 | 59 |
macrophage dendritic cell progenitor | 4.19e-43 | 61 |
hematopoietic cell | 6.35e-43 | 177 |
hematopoietic lineage restricted progenitor cell | 1.60e-39 | 120 |
classical monocyte | 2.29e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-39 | 42 |
nongranular leukocyte | 1.24e-37 | 115 |
granulocyte | 9.35e-09 | 8 |
intermediate monocyte | 3.30e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.30e-08 | 9 |
macrophage | 8.51e-07 | 6 |