FFCP PHASE1:Hg19::chr19:35625819..35625839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163175 | |EntrezGene=163175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18712 | |HGNC=18712 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N135,A8MVC2 | |UniProt=Q8N135,A8MVC2 | ||
|association_with_transcript=264bp_to_ENST00000310123,ENST00000392225_5end | |association_with_transcript=264bp_to_ENST00000310123,ENST00000392225_5end | ||
|cluster_id=chr19:35625819..35625839,- | |||
|coexpression_cluster_id=C32 | |coexpression_cluster_id=C32 | ||
|description=CAGE_peak_4_at_LGI4_5end | |description=CAGE_peak_4_at_LGI4_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-23;82!UBERON:0010122;2.42e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;1.45e-23;82!UBERON:0010122;2.42e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.16e-90!115;UBERON:0001049!2.87e-62!57;UBERON:0005068!2.87e-62!57;UBERON:0006241!2.87e-62!57;UBERON:0007135!2.87e-62!57;UBERON:0002616!7.93e-54!59;UBERON:0003080!1.03e-50!42;UBERON:0001017!2.61e-50!82;UBERON:0000955!2.91e-50!69;UBERON:0006238!2.91e-50!69;UBERON:0002780!2.38e-49!41;UBERON:0001890!2.38e-49!41;UBERON:0006240!2.38e-49!41;UBERON:0005743!2.78e-49!86;UBERON:0000073!1.64e-48!94;UBERON:0001016!1.64e-48!94;UBERON:0003075!9.08e-46!86;UBERON:0007284!9.08e-46!86;UBERON:0002020!2.44e-45!34;UBERON:0003528!2.44e-45!34;UBERON:0001893!3.18e-45!34;UBERON:0002791!1.28e-43!33;UBERON:0002346!5.53e-43!90;UBERON:0001869!3.46e-42!32;UBERON:0002619!1.30e-36!22;UBERON:0003056!3.12e-33!61;UBERON:0001950!5.40e-33!20;UBERON:0000956!1.72e-31!25;UBERON:0000203!1.72e-31!25;UBERON:0000153!2.95e-29!129;UBERON:0007811!2.95e-29!129;UBERON:0000033!4.68e-29!123;UBERON:0004121!8.28e-28!169;UBERON:0000924!1.00e-26!173;UBERON:0006601!1.00e-26!173;UBERON:0004111!8.96e-16!241;UBERON:0000025!1.12e-15!194;UBERON:0002420!1.15e-15!9;UBERON:0007245!1.15e-15!9;UBERON:0010009!1.15e-15!9;UBERON:0010011!1.15e-15!9;UBERON:0000454!1.15e-15!9;UBERON:0002308!2.97e-15!9;UBERON:0000125!2.97e-15!9;UBERON:0002298!2.07e-13!8;UBERON:0000477!2.40e-13!286;UBERON:0003076!1.50e-12!15;UBERON:0003057!1.50e-12!15;UBERON:0000062!1.54e-12!511;UBERON:0004732!3.88e-12!13;UBERON:0009663!4.53e-12!7;UBERON:0001871!5.89e-12!7;UBERON:0000200!6.25e-12!6;UBERON:0000475!1.08e-11!365;UBERON:0000481!4.42e-11!347;UBERON:0004733!1.42e-10!12;UBERON:0002028!1.42e-10!12;UBERON:0007277!1.42e-10!12;UBERON:0000349!2.39e-10!5;UBERON:0000483!3.44e-10!309;UBERON:0000119!6.38e-10!312;UBERON:0000064!6.44e-10!219;UBERON:0001872!8.83e-10!5;UBERON:0002021!1.50e-09!5;UBERON:0000922!2.60e-09!612;UBERON:0002050!9.40e-09!605;UBERON:0005423!9.40e-09!605;UBERON:0000467!1.39e-08!625;UBERON:0000468!1.45e-08!659;UBERON:0000480!1.59e-08!626;UBERON:0000923!2.44e-08!604;UBERON:0005291!2.44e-08!604;UBERON:0006598!2.44e-08!604;UBERON:0002532!2.44e-08!604;UBERON:0000369!6.09e-08!4;UBERON:0002435!6.09e-08!4;UBERON:0000204!6.09e-08!4;UBERON:0010082!6.09e-08!4;UBERON:0002771!4.23e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.16e-90!115;UBERON:0001049!2.87e-62!57;UBERON:0005068!2.87e-62!57;UBERON:0006241!2.87e-62!57;UBERON:0007135!2.87e-62!57;UBERON:0002616!7.93e-54!59;UBERON:0003080!1.03e-50!42;UBERON:0001017!2.61e-50!82;UBERON:0000955!2.91e-50!69;UBERON:0006238!2.91e-50!69;UBERON:0002780!2.38e-49!41;UBERON:0001890!2.38e-49!41;UBERON:0006240!2.38e-49!41;UBERON:0005743!2.78e-49!86;UBERON:0000073!1.64e-48!94;UBERON:0001016!1.64e-48!94;UBERON:0003075!9.08e-46!86;UBERON:0007284!9.08e-46!86;UBERON:0002020!2.44e-45!34;UBERON:0003528!2.44e-45!34;UBERON:0001893!3.18e-45!34;UBERON:0002791!1.28e-43!33;UBERON:0002346!5.53e-43!90;UBERON:0001869!3.46e-42!32;UBERON:0002619!1.30e-36!22;UBERON:0003056!3.12e-33!61;UBERON:0001950!5.40e-33!20;UBERON:0000956!1.72e-31!25;UBERON:0000203!1.72e-31!25;UBERON:0000153!2.95e-29!129;UBERON:0007811!2.95e-29!129;UBERON:0000033!4.68e-29!123;UBERON:0004121!8.28e-28!169;UBERON:0000924!1.00e-26!173;UBERON:0006601!1.00e-26!173;UBERON:0004111!8.96e-16!241;UBERON:0000025!1.12e-15!194;UBERON:0002420!1.15e-15!9;UBERON:0007245!1.15e-15!9;UBERON:0010009!1.15e-15!9;UBERON:0010011!1.15e-15!9;UBERON:0000454!1.15e-15!9;UBERON:0002308!2.97e-15!9;UBERON:0000125!2.97e-15!9;UBERON:0002298!2.07e-13!8;UBERON:0000477!2.40e-13!286;UBERON:0003076!1.50e-12!15;UBERON:0003057!1.50e-12!15;UBERON:0000062!1.54e-12!511;UBERON:0004732!3.88e-12!13;UBERON:0009663!4.53e-12!7;UBERON:0001871!5.89e-12!7;UBERON:0000200!6.25e-12!6;UBERON:0000475!1.08e-11!365;UBERON:0000481!4.42e-11!347;UBERON:0004733!1.42e-10!12;UBERON:0002028!1.42e-10!12;UBERON:0007277!1.42e-10!12;UBERON:0000349!2.39e-10!5;UBERON:0000483!3.44e-10!309;UBERON:0000119!6.38e-10!312;UBERON:0000064!6.44e-10!219;UBERON:0001872!8.83e-10!5;UBERON:0002021!1.50e-09!5;UBERON:0000922!2.60e-09!612;UBERON:0002050!9.40e-09!605;UBERON:0005423!9.40e-09!605;UBERON:0000467!1.39e-08!625;UBERON:0000468!1.45e-08!659;UBERON:0000480!1.59e-08!626;UBERON:0000923!2.44e-08!604;UBERON:0005291!2.44e-08!604;UBERON:0006598!2.44e-08!604;UBERON:0002532!2.44e-08!604;UBERON:0000369!6.09e-08!4;UBERON:0002435!6.09e-08!4;UBERON:0000204!6.09e-08!4;UBERON:0010082!6.09e-08!4;UBERON:0002771!4.23e-07!3 | ||
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|short_description=p4@LGI4 | |short_description=p4@LGI4 | ||
}} | }} |
Latest revision as of 10:00, 17 September 2015
Short description: | p4@LGI4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGI4_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 264bp_to_ENST00000310123, ENST00000392225_5end |
EntrezGene: | LGI4 |
HGNC: | 18712 |
UniProt: | Q8N135A8MVC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data