FFCP PHASE1:Hg19::chr16:67224002..67224047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283849 | |EntrezGene=283849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27540 | |HGNC=27540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002erw.1_5end | |association_with_transcript=0bp_to_uc002erw.1_5end | ||
|cluster_id=chr16:67224002..67224047,- | |||
|coexpression_cluster_id=C1765 | |coexpression_cluster_id=C1765 | ||
|description=CAGE_peak_1_at_EXOC3L1_5end | |description=CAGE_peak_1_at_EXOC3L1_5end | ||
|id=chr16:67224002..67224047,- | |id=chr16:67224002..67224047,- | ||
|ontology_enrichment_celltype=CL:0002139;1.63e-45;24!CL:0000115;2.18e-44;36!CL:0000071;2.29e-37;18!CL:0002078;6.75e-25;45!CL:0000213;8.23e-17;58!CL:0000215;8.23e-17;58!CL:0002543;1.99e-15;6!CL:1000413;5.27e-14;9!CL:0002188;3.33e-13;5!CL:0002144;1.65e-12;3!CL:0002618;2.59e-11;3!CL:0002138;7.30e-10;6!CL:0002544;9.90e-10;6!CL:1000746;2.00e-09;7!CL:1000612;2.00e-09;7!CL:0002262;6.24e-09;2!CL:1000398;6.24e-09;2!CL:0002545;4.03e-08;2 | |ontology_enrichment_celltype=CL:0002139!2.69e-30!24;CL:0000115!1.02e-29!35;CL:0000071!1.32e-25!18;CL:0002546!1.32e-25!18;CL:0002078!1.42e-21!44;CL:0000213!1.72e-14!57;CL:0000215!1.72e-14!57;CL:1000413!7.18e-13!9;CL:0002543!7.14e-10!6;CL:0002544!3.85e-09!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;1.63e-45;24!CL:0000115;2.18e-44;36!CL:0000071;2.29e-37;18!CL:0002078;6.75e-25;45!CL:0000213;8.23e-17;58!CL:0000215;8.23e-17;58!CL:0002543;1.99e-15;6!CL:1000413;5.27e-14;9!CL:0002188;3.33e-13;5!CL:0002144;1.65e-12;3!CL:0002618;2.59e-11;3!CL:0002138;7.30e-10;6!CL:0002544;9.90e-10;6!CL:1000746;2.00e-09;7!CL:1000612;2.00e-09;7!CL:0002262;6.24e-09;2!CL:1000398;6.24e-09;2!CL:0002545;4.03e-08;2 | ||
|ontology_enrichment_disease=DOID:3095;2.99e-07;22!DOID:2994;2.99e-07;22 | |ontology_enrichment_celltype_v019_2=CL:0000115,3.67e-54,36;CL:0002139,2.42e-45,24;CL:0002078,4.70e-42,45;CL:0000071,3.73e-37,18;CL:0002546,3.73e-37,18;CL:0000213,3.29e-31,58;CL:0000215,3.29e-31,58;CL:0002543,1.77e-15,6;CL:1000413,8.75e-14,9;CL:0002188,3.44e-13,5;CL:0002144,1.62e-12,3;CL:0000222,8.51e-12,121;CL:0002618,2.17e-11,3;CL:0005020,6.82e-10,6;CL:0002138,6.82e-10,6;CL:0005022,6.82e-10,6;CL:0002544,1.44e-09,6;CL:1000746,2.05e-09,7;CL:1000612,2.05e-09,7;CL:0002262,6.50e-09,2;CL:1000398,6.50e-09,2;CL:0000076,2.70e-08,63;CL:0002545,5.80e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0004638;2.29e-37;18!UBERON:0001986;2.29e-37;18!UBERON:0004852;2.29e-37;18!UBERON:0000487;5.95e-30;22!UBERON:0006914;5.98e-26;25!UBERON:0000490;1.81e-16;33!UBERON:0001638;3.29e-14;9!UBERON:0003920;3.29e-14;9!UBERON:0004582;3.29e-14;9!UBERON:0003915;5.27e-14;9!UBERON:0004700;5.27e-14;9!UBERON:0001917;5.27e-14;9!UBERON:0000055;6.96e-13;65!UBERON:0010523;1.65e-12;3!UBERON:0001915;1.65e-12;3!UBERON:0001982;1.65e-12;3!UBERON:0007500;1.83e-09;56!UBERON:0001981;1.83e-09;56!UBERON:0004537;1.83e-09;56!UBERON:0000074;2.00e-09;7!UBERON:0001229;2.00e-09;7!UBERON:0000353;5.06e-09;15!UBERON:0001281;6.24e-09;2!UBERON:0003497;6.24e-09;2!UBERON:0003909;6.24e-09;2!UBERON:0003835;6.24e-09;2!UBERON:0003914;1.37e-08;74!UBERON:0005800;4.03e-08;2!UBERON:0001515;4.03e-08;2!UBERON:0001473;2.09e-07;8!UBERON:0004536;2.09e-07;8!UBERON:0006558;2.09e-07;8!UBERON:0000025;2.88e-07;93!UBERON:0002049;4.56e-07;75!UBERON:0007798;4.56e-07;75!UBERON:0002066;5.89e-07;5 | |ontology_enrichment_development_v019=CL:0002546;2.29e-37;18!CL:0005022;7.30e-10;6!UBERON:0004872;1.11e-08;7 | ||
|ontology_enrichment_disease=DOID:3095!6.18e-07!22;DOID:2994!6.18e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.99e-07;22!DOID:2994;2.99e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.98e-07,22;DOID:2994,2.98e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.32e-25!18;UBERON:0004638!1.32e-25!18;UBERON:0004852!1.32e-25!18;UBERON:0000487!8.31e-20!22;UBERON:0007023!6.03e-19!115;UBERON:0006914!1.07e-16!25;UBERON:0000025!2.46e-14!194;UBERON:0004111!2.81e-13!241;UBERON:0003915!7.18e-13!9;UBERON:0004700!7.18e-13!9;UBERON:0001917!7.18e-13!9;UBERON:0000477!1.89e-12!286;UBERON:0000055!1.15e-11!69;UBERON:0004872!3.05e-11!84;UBERON:0003914!8.10e-10!118;UBERON:0001981!3.39e-09!60;UBERON:0007500!3.39e-09!60;UBERON:0004537!3.39e-09!60;UBERON:0006965!3.39e-09!60;UBERON:0002049!4.33e-09!79;UBERON:0007798!4.33e-09!79;UBERON:0001009!4.40e-09!113;UBERON:0001638!2.73e-08!9;UBERON:0003920!2.73e-08!9;UBERON:0004582!2.73e-08!9;UBERON:0000119!5.92e-08!312;UBERON:0000483!7.74e-08!309;UBERON:0004535!1.43e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.29e-37;18!UBERON:0001986;2.29e-37;18!UBERON:0004852;2.29e-37;18!UBERON:0000487;5.95e-30;22!UBERON:0006914;5.98e-26;25!UBERON:0000490;1.81e-16;33!UBERON:0001638;3.29e-14;9!UBERON:0003920;3.29e-14;9!UBERON:0004582;3.29e-14;9!UBERON:0003915;5.27e-14;9!UBERON:0004700;5.27e-14;9!UBERON:0001917;5.27e-14;9!UBERON:0000055;6.96e-13;65!UBERON:0010523;1.65e-12;3!UBERON:0001915;1.65e-12;3!UBERON:0001982;1.65e-12;3!UBERON:0007500;1.83e-09;56!UBERON:0001981;1.83e-09;56!UBERON:0004537;1.83e-09;56!UBERON:0000074;2.00e-09;7!UBERON:0001229;2.00e-09;7!UBERON:0000353;5.06e-09;15!UBERON:0001281;6.24e-09;2!UBERON:0003497;6.24e-09;2!UBERON:0003909;6.24e-09;2!UBERON:0003835;6.24e-09;2!UBERON:0003914;1.37e-08;74!UBERON:0005800;4.03e-08;2!UBERON:0001515;4.03e-08;2!UBERON:0001473;2.09e-07;8!UBERON:0004536;2.09e-07;8!UBERON:0006558;2.09e-07;8!UBERON:0000025;2.88e-07;93!UBERON:0002049;4.56e-07;75!UBERON:0007798;4.56e-07;75!UBERON:0002066;5.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.73e-37,18;UBERON:0001986,3.73e-37,18;UBERON:0004852,3.73e-37,18;UBERON:0000487,8.83e-30,22;UBERON:0006914,8.44e-26,25;UBERON:0000055,1.34e-18,68;UBERON:0002049,1.52e-15,78;UBERON:0007798,1.52e-15,78;UBERON:0004872,1.90e-14,83;UBERON:0001638,3.43e-14,9;UBERON:0003920,3.43e-14,9;UBERON:0004582,3.43e-14,9;UBERON:0007500,5.59e-14,59;UBERON:0001981,5.59e-14,59;UBERON:0004537,5.59e-14,59;UBERON:0006965,5.59e-14,59;UBERON:0003915,8.75e-14,9;UBERON:0004700,8.75e-14,9;UBERON:0001917,8.75e-14,9;UBERON:0003914,1.22e-13,117;UBERON:0010523,1.62e-12,3;UBERON:0001915,1.62e-12,3;UBERON:0001982,1.62e-12,3;UBERON:0001009,1.41e-11,112;UBERON:0003887,1.65e-11,12;UBERON:0004535,7.58e-11,109;UBERON:0004111,1.91e-09,240;UBERON:0010532,2.05e-09,7;UBERON:0000074,2.05e-09,7;UBERON:0001229,2.05e-09,7;UBERON:0001230,2.05e-09,7;UBERON:0003220,2.05e-09,7;UBERON:0005749,2.05e-09,7;UBERON:0004199,2.05e-09,7;UBERON:0004209,2.05e-09,7;UBERON:0004198,2.05e-09,7;UBERON:0000353,5.22e-09,15;UBERON:0000025,5.70e-09,192;UBERON:0001281,6.50e-09,2;UBERON:0003497,6.50e-09,2;UBERON:0003909,6.50e-09,2;UBERON:0003835,6.50e-09,2;UBERON:0005103,3.13e-08,8;UBERON:0000083,3.13e-08,8;UBERON:0009201,3.13e-08,8;UBERON:0006553,3.13e-08,8;UBERON:0003074,3.13e-08,8;UBERON:0003060,3.13e-08,8;UBERON:0005800,5.80e-08,2;UBERON:0001515,5.80e-08,2;UBERON:0005172,1.14e-07,54;UBERON:0005173,1.14e-07,54;UBERON:0001473,1.99e-07,8;UBERON:0004536,1.99e-07,8;UBERON:0006558,1.99e-07,8;UBERON:0000080,2.61e-07,9;UBERON:0002120,2.61e-07,9;UBERON:0004875,2.61e-07,9;UBERON:0005721,2.61e-07,9;UBERON:0005754,2.61e-07,9;UBERON:0007297,2.61e-07,9;UBERON:0002066,5.31e-07,5;UBERON:0000058,5.97e-07,19 | |||
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|short_description=p1@EXOC3L1 | |short_description=p1@EXOC3L1 | ||
}} | }} |
Latest revision as of 10:07, 17 September 2015
Short description: | p1@EXOC3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXOC3L1_5end |
Coexpression cluster: | C1765_Renal_Hepatic_Endothelial_placenta_Lymphatic_breast_lung |
Association with transcript: | 0bp_to_uc002erw.1_5end |
EntrezGene: | EXOC3L1 |
HGNC: | 27540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.67e-54 | 36 |
endothelial cell of vascular tree | 2.42e-45 | 24 |
meso-epithelial cell | 4.70e-42 | 45 |
blood vessel endothelial cell | 3.73e-37 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.73e-37 | 18 |
lining cell | 3.29e-31 | 58 |
barrier cell | 3.29e-31 | 58 |
vein endothelial cell | 1.77e-15 | 6 |
endothelial cell of artery | 8.75e-14 | 9 |
glomerular endothelial cell | 3.44e-13 | 5 |
capillary endothelial cell | 1.62e-12 | 3 |
mesodermal cell | 8.51e-12 | 121 |
endothelial cell of umbilical vein | 2.17e-11 | 3 |
lymphangioblast | 6.82e-10 | 6 |
endothelial cell of lymphatic vessel | 6.82e-10 | 6 |
vascular lymphangioblast | 6.82e-10 | 6 |
aortic endothelial cell | 1.44e-09 | 6 |
glomerular cell | 2.05e-09 | 7 |
kidney corpuscule cell | 2.05e-09 | 7 |
endothelial cell of sinusoid | 6.50e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.50e-09 | 2 |
squamous epithelial cell | 2.70e-08 | 63 |
thoracic aorta endothelial cell | 5.80e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.98e-07 | 22 |
germ cell cancer | 2.98e-07 | 22 |