FFCP PHASE1:Hg19::chr2:47596415..47596470,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:47596415..47596470,+ to FFCP PHASE1:Hg19::chr2:47596415..47596470,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt=P16422 | |UniProt=P16422 | ||
|association_with_transcript=128bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | |||
|cluster_id=chr2:47596415..47596470,+ | |||
|description=CAGE_peak_1_at_EPCAM_5end | |||
|id=chr2:47596415..47596470,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.09e-27!254;CL:0000223!2.91e-14!59;CL:0002076!3.70e-13!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.73e-13;42!CL:0002251;7.21e-08;20!CL:1000507;2.41e-07;10!CL:1000494;2.41e-07;10!CL:0000039;2.67e-07;7!CL:0000586;2.67e-07;7!CL:0000082;5.73e-07;19!CL:1000497;7.36e-07;17!CL:0002518;7.36e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-30,253;CL:0000223,1.82e-18,58;CL:0002076,1.54e-16,42;CL:0002251,7.05e-08,20;CL:1000507,2.44e-07,10;CL:1000494,2.44e-07,10;CL:0000039,2.67e-07,7;CL:0000586,2.67e-07,7;CL:0000082,5.61e-07,19;CL:1000497,7.11e-07,17;CL:0002518,7.11e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;4.12e-10;58!UBERON:0001041;9.76e-10;30!UBERON:0006595;1.08e-07;86 | |||
|ontology_enrichment_disease=DOID:305!8.18e-28!106;DOID:0050687!2.77e-18!143;DOID:299!7.17e-12!25;DOID:1749!5.63e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.10e-14;25!DOID:1749;1.52e-10;14!DOID:305;1.81e-10;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.20e-31,106;DOID:0050687,6.48e-21,143;DOID:299,1.95e-14,25;DOID:1749,1.50e-10,14;DOID:162,3.34e-08,235;DOID:14566,1.62e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-19!169;UBERON:0000925!5.16e-19!169;UBERON:0006595!5.16e-19!169;UBERON:0001007!9.04e-17!155;UBERON:0001555!9.04e-17!155;UBERON:0007026!9.04e-17!155;UBERON:0004921!3.86e-16!129;UBERON:0004185!3.86e-16!129;UBERON:0005177!2.14e-14!107;UBERON:0000466!3.08e-14!126;UBERON:0000077!3.41e-13!130;UBERON:0000464!9.39e-13!104;UBERON:0000062!3.46e-12!511;UBERON:0005911!2.22e-11!82;UBERON:0001041!3.94e-10!98;UBERON:0007023!1.75e-09!115;UBERON:0000064!1.88e-09!219;UBERON:0000481!6.66e-09!347;UBERON:0009569!1.24e-08!113;UBERON:0001004!2.18e-08!72;UBERON:0005409!2.31e-08!35;UBERON:0001008!2.44e-08!45;UBERON:0005153!2.50e-08!37;UBERON:0006554!4.19e-08!44;UBERON:0005181!9.73e-08!35;UBERON:0005178!1.16e-07!34;UBERON:0002224!1.16e-07!34;UBERON:0000160!1.32e-07!27;UBERON:0000489!1.61e-07!32;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22;UBERON:0000922!3.85e-07!612;UBERON:0000065!4.99e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.12e-10;22!UBERON:0004921;6.51e-10;33!UBERON:0006554;7.60e-10;30!UBERON:0001008;7.60e-10;30!UBERON:0002048;1.30e-08;22!UBERON:0000117;1.30e-08;22!UBERON:0000171;1.30e-08;22!UBERON:0000170;1.30e-08;22!UBERON:0004807;2.20e-08;22!UBERON:0000160;2.29e-08;17!UBERON:0005178;2.96e-08;34!UBERON:0002224;2.96e-08;34!UBERON:0005181;6.77e-08;35!UBERON:0000489;8.33e-08;29!UBERON:0002113;9.39e-08;24!UBERON:0011143;9.39e-08;24!UBERON:0005911;2.20e-07;36!UBERON:0004211;2.41e-07;10!UBERON:0009773;2.41e-07;10!UBERON:0001231;2.41e-07;10!UBERON:0004810;2.41e-07;10!UBERON:0000922;4.35e-07;49!UBERON:0004802;5.73e-07;19!UBERON:0000115;5.73e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.08e-21,160;UBERON:0000925,9.08e-21,160;UBERON:0006595,9.08e-21,160;UBERON:0001007,1.51e-18,145;UBERON:0001555,1.51e-18,145;UBERON:0007026,1.51e-18,145;UBERON:0004921,8.35e-18,118;UBERON:0005177,1.28e-17,101;UBERON:0005911,2.98e-14,82;UBERON:0009569,5.32e-12,112;UBERON:0001008,9.49e-12,48;UBERON:0006554,1.86e-11,47;UBERON:0005153,2.33e-10,37;UBERON:0001041,7.28e-10,87;UBERON:0005178,2.04e-09,34;UBERON:0002224,2.04e-09,34;UBERON:0005181,6.61e-09,35;UBERON:0000489,7.61e-09,31;UBERON:0002113,7.73e-09,26;UBERON:0003918,7.73e-09,26;UBERON:0011143,7.73e-09,26;UBERON:0005095,7.73e-09,26;UBERON:0007687,7.73e-09,26;UBERON:0002048,1.27e-08,22;UBERON:0000117,1.27e-08,22;UBERON:0000171,1.27e-08,22;UBERON:0000170,1.27e-08,22;UBERON:0005597,1.27e-08,22;UBERON:0000118,1.27e-08,22;UBERON:0001004,1.40e-08,74;UBERON:0000160,2.20e-08,17;UBERON:0005409,3.58e-08,25;UBERON:0005172,3.95e-08,54;UBERON:0005173,3.95e-08,54;UBERON:0011216,8.28e-08,223;UBERON:0005157,1.29e-07,47;UBERON:0005156,1.76e-07,59;UBERON:0000990,1.76e-07,59;UBERON:0000065,2.08e-07,54;UBERON:0004810,2.44e-07,10;UBERON:0006555,4.85e-07,16;UBERON:0004819,4.85e-07,16;UBERON:0004802,5.61e-07,19;UBERON:0000115,5.61e-07,19;UBERON:0004807,9.92e-07,28 | |||
|phase1_expression=0,0,0,0,0,2.61701557230111,0,0,0,179.385773646101,163.285473305548,12.66959958355,7.3854753903967,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0.246301768349837,0,0.393364276848904,0,1.08371286321253,46.8904824484253,15.662707776469,19.227208528673,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.434377689410233,3.02699751316684,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,4.47752944117631,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.756278537312543,0.665188192387692,0.87834785693126,82.4513280258101,25.1363748921854,32.2582465222454,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,50.586910048534,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,63.0030381312348,53.7309857563944,56.7873098870228,237.970700658841,253.264387262358,272.358602086151,185.138644257452,244.75122534936,312.055642009835,0,0,0,0,0,0,0,0,0.110293972732394,0.653638332277218,0.474541238222193,0,0.196221465125346,0,0,0,0.8231480226628,0,1.26755034821831,1.96565443335525,2.36315962672562,0,847.267353123509,0.343135620597051,12.5115325365833,41.5886487053192,40.5131758818872,76.570644146104,0,0,0,0.34779121492523,0.117408694235822,0,0,0,147.768222418384,192.300900309251,0,0,0,96.5458490063803,18.1420698454768,113.561852891152,10.1201130654219,11.9159914790724,24.5364914665735,0,0.088048434013226,1.4512968087854,1.72943944100354,3.53478813593864,0,0,0,5.13217338068116,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,11.2157201435116,0,2.11673205330776,0,0,0,0,0,0,2.96836132889982,0,0,0,0,0,901.369775054319,27.0683734909435,87.3848585001656,0,0,0,195.820632001817,248.528492835946,61.1792819957947,99.3746727642173,156.216410761456,0,0,1.51141141271498,1.54227252690289,14.3601611898242,14.0473136679359,319.614846398478,363.180215901853,57.9835614730442,1.97333888981341,0.784306353074702,3.59030175162945,1.96808787419823,3.90454073597164,40.2890355542594,2.19766715564024,2.0627374980147,2.87132768998086,8.45078319847478,0,0,0.154048617114644,0,0,0,0,0,0,35.3709718872493,23.447188218543,13.1441093869422,70.1023421328961,0,0.94443704049192,0,0,0,0,0,0,0,1.2655176988749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,47.726167911854,11.3951386841084,25.0449265181042,41.1408409394525,8.6101074534246,10.1082885400575,11.5291839919536,10.5672764095201,0,0,0,0,0,0,0,0,1.06824071127473,0,248.715819220747,0,0,0,0,0,0,0,22.7235358192189,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,710.759772470419,0,0,0,0,70.6683674823562,73.0533114848291,26.1086596784347,3.97659059106519,1.40669416410513,0,0,107.251707329021,14.5451031423281,274.34992812243,561.810027715036,0,0,0,420.314278316048,299.860467581645,0,11.1467048369735,0,0,0,0.556608588971108,3.99227596002388,247.406373030972,240.165159989553,34.7999796208701,179.793648291089,509.270061536411,197.147326594459,12.7555048099342,0.291604613383254,0.173624994933292,3.54296554325536,3.97968247463846,1.52581736317083,0.552896299656123,0.591095237907095,0.87754158861589,0,88.9523488497489,28.6254961634125,0,334.317661362687,291.263556109711,421.660450429313,22.3300811812344,32.1507552840537,10.1276607443541,0,0,0.664846727600626,42.6375798566472,41.7613198096785,30.5435288296034,13.6622687561413,17.3240871088613,49.5845451640864,807.023003538826,885.294286390771,1.51472047819464,604.123992164652,807.9713941735,2083.61279422366,0,0.123563938946503,0,0.943615861729479,0.802577647298789,0.937057782901357,0,347.109033985527,0,159.412098751154,589.224787156993,5.20323694771833,0.31593289814244,15.1826653608637,15.2421641353953,1.99396161812156,0.330991955875499,0.313932918407225,2.38944859545918,643.786793119391,0,1082.31852825788,144.440793788793,200.323234341506,182.589368312921,0,0.387025325156341,0,0.328461828212837,10.6687918137261,0.264768380074501,14.2367866691735,0,0.19871461170299,0.443175571691151,286.091672941017,214.104208891847,218.789319607836,7.19314594495669,485.296524975029,0,13.7275998289572,60.0708507610584,4.10033367365927,107.476479785259,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,139.575621348795,0,0,0.335917362433631,0,664.026912306487,142.833909522996,147.68921821905,1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| ||
|short_description=p1@EPCAM | |||
}} | }} |
Latest revision as of 12:08, 17 September 2015
Short description: | p1@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | P16422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.61e-30 | 253 |
endodermal cell | 1.82e-18 | 58 |
endo-epithelial cell | 1.54e-16 | 42 |
epithelial cell of alimentary canal | 7.05e-08 | 20 |
kidney tubule cell | 2.44e-07 | 10 |
nephron tubule epithelial cell | 2.44e-07 | 10 |
germ line cell | 2.67e-07 | 7 |
germ cell | 2.67e-07 | 7 |
epithelial cell of lung | 5.61e-07 | 19 |
kidney cell | 7.11e-07 | 17 |
kidney epithelial cell | 7.11e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.20e-31 | 106 |
cell type cancer | 6.48e-21 | 143 |
adenocarcinoma | 1.95e-14 | 25 |
squamous cell carcinoma | 1.50e-10 | 14 |
cancer | 3.34e-08 | 235 |
disease of cellular proliferation | 1.62e-07 | 239 |