FFCP PHASE1:Hg19::chr11:279403..279420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=171389 | |EntrezGene=171389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22944 | |HGNC=22944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=344bp_to_ENST00000527946_5end | |association_with_transcript=344bp_to_ENST00000527946_5end | ||
|cluster_id=chr11:279403..279420,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_NLRP6_5end | |description=CAGE_peak_1_at_NLRP6_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.25e-42!140;CL:0002087!1.29e-35!119;CL:0000766!4.31e-32!76;CL:0002057!2.12e-31!42;CL:0002031!4.62e-31!124;CL:0000037!4.33e-30!172;CL:0000566!4.33e-30!172;CL:0000860!2.37e-28!45;CL:0002032!3.76e-28!165;CL:0000837!3.76e-28!165;CL:0000988!7.85e-27!182;CL:0002194!4.86e-25!63;CL:0000576!4.86e-25!63;CL:0000040!4.86e-25!63;CL:0000559!4.86e-25!63;CL:0002009!6.10e-25!65;CL:0000557!1.23e-23!71;CL:0000839!4.10e-23!70;CL:0000763!1.78e-18!112;CL:0000049!1.78e-18!112;CL:0000791!1.31e-14!18;CL:0000789!1.31e-14!18;CL:0002420!1.31e-14!18;CL:0002419!1.31e-14!18;CL:0000790!1.31e-14!18;CL:0000094!1.11e-10!8;CL:0000625!1.50e-10!11;CL:0002393!1.59e-10!9;CL:0002397!1.59e-10!9;CL:0000542!3.84e-09!53;CL:0000051!3.84e-09!53;CL:0000084!4.89e-09!25;CL:0000827!4.89e-09!25;CL:0000838!1.17e-08!52;CL:0000081!3.96e-07!11;CL:0000624!7.43e-07!6 | |ontology_enrichment_celltype=CL:0000738!2.25e-42!140;CL:0002087!1.29e-35!119;CL:0000766!4.31e-32!76;CL:0002057!2.12e-31!42;CL:0002031!4.62e-31!124;CL:0000037!4.33e-30!172;CL:0000566!4.33e-30!172;CL:0000860!2.37e-28!45;CL:0002032!3.76e-28!165;CL:0000837!3.76e-28!165;CL:0000988!7.85e-27!182;CL:0002194!4.86e-25!63;CL:0000576!4.86e-25!63;CL:0000040!4.86e-25!63;CL:0000559!4.86e-25!63;CL:0002009!6.10e-25!65;CL:0000557!1.23e-23!71;CL:0000839!4.10e-23!70;CL:0000763!1.78e-18!112;CL:0000049!1.78e-18!112;CL:0000791!1.31e-14!18;CL:0000789!1.31e-14!18;CL:0002420!1.31e-14!18;CL:0002419!1.31e-14!18;CL:0000790!1.31e-14!18;CL:0000094!1.11e-10!8;CL:0000625!1.50e-10!11;CL:0002393!1.59e-10!9;CL:0002397!1.59e-10!9;CL:0000542!3.84e-09!53;CL:0000051!3.84e-09!53;CL:0000084!4.89e-09!25;CL:0000827!4.89e-09!25;CL:0000838!1.17e-08!52;CL:0000081!3.96e-07!11;CL:0000624!7.43e-07!6 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000738,3.95e-39,136;CL:0002087,1.57e-33,115;CL:0000037,4.87e-30,168;CL:0000988,1.08e-27,177;CL:0002031,6.55e-27,120;CL:0002032,1.08e-26,161;CL:0000837,1.08e-26,161;CL:0000766,2.75e-24,72;CL:0000860,7.63e-24,42;CL:0002057,7.63e-24,42;CL:0000473,7.10e-22,48;CL:0000234,7.10e-22,48;CL:0000791,1.42e-20,18;CL:0000789,1.42e-20,18;CL:0002420,1.42e-20,18;CL:0002419,1.42e-20,18;CL:0000790,1.42e-20,18;CL:0000625,3.86e-18,11;CL:0002194,1.67e-17,59;CL:0000576,1.67e-17,59;CL:0000040,1.67e-17,59;CL:0000559,1.67e-17,59;CL:0002009,1.06e-16,61;CL:0000839,6.56e-15,66;CL:0000557,1.39e-14,67;CL:0002393,1.44e-14,9;CL:0002397,1.44e-14,9;CL:0000094,1.76e-14,8;CL:0000763,2.86e-14,108;CL:0000049,2.86e-14,108;CL:0000084,8.97e-14,25;CL:0000827,8.97e-14,25;CL:0000838,1.01e-12,52;CL:0000542,2.24e-12,53;CL:0000051,2.24e-12,53;CL:0000081,3.75e-10,11;CL:0000775,1.65e-08,3;CL:0000875,4.83e-08,3;CL:0002396,4.83e-08,3;CL:0000134,1.78e-07,354;CL:0000226,2.69e-07,3;CL:0000842,2.69e-07,3;CL:0002320,4.60e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;1.61e-20;18!CL:0002057;3.95e-17;42!CL:0000051;2.88e-07;53 | |ontology_enrichment_development_v019=CL:0000790;1.61e-20;18!CL:0002057;3.95e-17;42!CL:0000051;2.88e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.35e-31!102;UBERON:0003061!2.35e-31!102;UBERON:0002193!3.23e-30!112;UBERON:0007023!3.68e-25!115;UBERON:0002371!3.39e-19!80;UBERON:0002405!6.65e-18!115;UBERON:0001474!8.68e-17!86;UBERON:0004765!8.70e-13!101;UBERON:0001434!8.70e-13!101;UBERON:0000178!1.04e-11!15;UBERON:0000179!1.04e-11!15;UBERON:0000463!1.04e-11!15;UBERON:0003081!3.14e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!2.35e-31!102;UBERON:0003061!2.35e-31!102;UBERON:0002193!3.23e-30!112;UBERON:0007023!3.68e-25!115;UBERON:0002371!3.39e-19!80;UBERON:0002405!6.65e-18!115;UBERON:0001474!8.68e-17!86;UBERON:0004765!8.70e-13!101;UBERON:0001434!8.70e-13!101;UBERON:0000178!1.04e-11!15;UBERON:0000179!1.04e-11!15;UBERON:0000463!1.04e-11!15;UBERON:0003081!3.14e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.94e-21;15!UBERON:0000179;5.94e-21;15!UBERON:0000463;5.94e-21;15!UBERON:0002390;4.60e-12;32!UBERON:0002193;2.98e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.94e-21;15!UBERON:0000179;5.94e-21;15!UBERON:0000463;5.94e-21;15!UBERON:0002390;4.60e-12;32!UBERON:0002193;2.98e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-28,98;UBERON:0003061,3.37e-28,98;UBERON:0002193,1.52e-27,108;UBERON:0000178,5.80e-21,15;UBERON:0000179,5.80e-21,15;UBERON:0000463,5.80e-21,15;UBERON:0002405,1.19e-14,93;UBERON:0002371,4.72e-12,76;UBERON:0001474,1.10e-10,82;UBERON:0004765,3.67e-09,90;UBERON:0003081,6.89e-08,203;UBERON:0001434,1.27e-07,100 | |||
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| ||
|short_description=p1@NLRP6 | |short_description=p1@NLRP6 | ||
}} | }} |
Latest revision as of 12:43, 17 September 2015
Short description: | p1@NLRP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLRP6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 344bp_to_ENST00000527946_5end |
EntrezGene: | NLRP6 |
HGNC: | 22944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.37e-28 | 98 |
blood island | 3.37e-28 | 98 |
hemolymphoid system | 1.52e-27 | 108 |
blood | 5.80e-21 | 15 |
haemolymphatic fluid | 5.80e-21 | 15 |
organism substance | 5.80e-21 | 15 |
immune system | 1.19e-14 | 93 |
bone marrow | 4.72e-12 | 76 |
bone element | 1.10e-10 | 82 |
skeletal element | 3.67e-09 | 90 |
lateral plate mesoderm | 6.89e-08 | 203 |
skeletal system | 1.27e-07 | 100 |