FFCP PHASE1:Hg19::chr16:68679173..68679184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |EntrezGene=1001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |HGNC=1762 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZX7 | |UniProt=F5GZX7 | ||
|association_with_transcript=-19bp_to_ENST00000542274_5end | |association_with_transcript=-19bp_to_ENST00000542274_5end | ||
|cluster_id=chr16:68679173..68679184,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_2_at_CDH3_5end | |description=CAGE_peak_2_at_CDH3_5end | ||
|id=chr16:68679173..68679184,+ | |id=chr16:68679173..68679184,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.19e-52!254;CL:0002076!2.45e-24!43;CL:0000223!2.50e-17!59;CL:0002077!2.17e-14!33;CL:0002368!4.28e-12!13;CL:0002251!5.47e-12!21;CL:0002159!3.93e-11!13;CL:0000076!2.29e-09!62;CL:0002202!4.22e-08!9;CL:0002632!4.22e-08!9;CL:0000147!5.33e-08!14;CL:0000150!5.57e-08!9;CL:0000148!1.33e-07!10;CL:0000541!1.33e-07!10;CL:0000075!3.10e-07!27;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12;CL:0002321!8.73e-07!248;CL:0000039!9.99e-07!7;CL:0000586!9.99e-07!7 | |ontology_enrichment_celltype=CL:0000066!4.19e-52!254;CL:0002076!2.45e-24!43;CL:0000223!2.50e-17!59;CL:0002077!2.17e-14!33;CL:0002368!4.28e-12!13;CL:0002251!5.47e-12!21;CL:0002159!3.93e-11!13;CL:0000076!2.29e-09!62;CL:0002202!4.22e-08!9;CL:0002632!4.22e-08!9;CL:0000147!5.33e-08!14;CL:0000150!5.57e-08!9;CL:0000148!1.33e-07!10;CL:0000541!1.33e-07!10;CL:0000075!3.10e-07!27;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12;CL:0002321!8.73e-07!248;CL:0000039!9.99e-07!7;CL:0000586!9.99e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.18e-28;42!CL:0002251;2.16e-18;20!CL:0002368;7.24e-17;13!CL:0002159;2.59e-12;14!CL:0002077;2.58e-11;34!CL:0002202;3.75e-11;9!CL:0002632;3.75e-11;9!CL:0000039;6.81e-09;7!CL:0000586;6.81e-09;7!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:0000244;4.89e-08;4!CL:0000731;4.89e-08;4!CL:0000622;1.02e-07;5!CL:0000082;1.39e-07;19!CL:0000150;2.23e-07;9!CL:0002322;7.29e-07;5!CL:1000449;8.28e-07;15!CL:0002327;9.03e-07;4!CL:0000240;9.54e-07;6!CL:0000311;9.54e-07;6!CL:0000079;9.54e-07;6!CL:0000237;9.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.80e-56,253;CL:0002076,5.74e-37,42;CL:0000223,1.15e-26,58;CL:0002251,2.18e-18,20;CL:0002368,7.60e-17,13;CL:0002077,6.78e-13,34;CL:0002159,2.17e-12,14;CL:0002202,3.86e-11,9;CL:0002632,3.86e-11,9;CL:0002321,7.54e-11,250;CL:0000076,1.17e-10,63;CL:0000039,6.13e-09,7;CL:0000586,6.13e-09,7;CL:1000507,1.32e-08,10;CL:1000494,1.32e-08,10;CL:0000244,4.94e-08,4;CL:0000731,4.94e-08,4;CL:0000622,1.06e-07,5;CL:0000082,1.34e-07,19;CL:0000150,2.39e-07,9;CL:1000449,8.56e-07,15;CL:0002322,8.77e-07,5;CL:0000240,8.82e-07,6;CL:0000311,8.82e-07,6;CL:0000079,8.82e-07,6;CL:0000237,8.82e-07,6;CL:0000036,8.82e-07,6;CL:0000357,8.82e-07,6;CL:0000114,8.82e-07,6;CL:0002327,9.12e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.27e-13;58!CL:0000357;9.54e-07;6!CL:0000114;9.54e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.19e-19!106;DOID:0050687!1.30e-14!143;DOID:1749!2.32e-12!14;DOID:299!9.45e-08!25 | |ontology_enrichment_disease=DOID:305!2.19e-19!106;DOID:0050687!1.30e-14!143;DOID:1749!2.32e-12!14;DOID:299!9.45e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-17;14!DOID:299;3.69e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.65e-20,106;DOID:1749,3.23e-17,14;DOID:0050687,4.32e-14,143;DOID:299,3.38e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-15!169;UBERON:0000925!1.43e-15!169;UBERON:0006595!1.43e-15!169;UBERON:0000464!1.01e-14!104;UBERON:0001004!5.03e-13!72;UBERON:0006554!3.08e-12!44;UBERON:0000466!3.93e-12!126;UBERON:0005153!4.43e-12!37;UBERON:0001008!9.44e-12!45;UBERON:0005911!1.59e-11!82;UBERON:0005157!6.50e-11!51;UBERON:0000065!1.85e-10!53;UBERON:0000077!2.91e-10!130;UBERON:0003064!5.02e-10!37;UBERON:0001007!8.03e-10!155;UBERON:0001555!8.03e-10!155;UBERON:0007026!8.03e-10!155;UBERON:0005177!2.92e-09!107;UBERON:0005178!4.85e-09!34;UBERON:0002224!4.85e-09!34;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0005181!1.38e-08!35;UBERON:0000161!2.47e-08!35;UBERON:0009569!2.90e-08!113;UBERON:0003101!3.21e-08!22;UBERON:0000079!3.21e-08!22;UBERON:0000058!6.18e-08!26;UBERON:0000064!7.56e-08!219;UBERON:0004921!9.45e-08!129;UBERON:0004185!9.45e-08!129;UBERON:0000344!1.37e-07!12;UBERON:0002553!2.28e-07!70;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0002048!5.87e-07!22;UBERON:0000117!5.87e-07!22;UBERON:0000171!5.87e-07!22;UBERON:0000170!5.87e-07!22;UBERON:0005597!5.87e-07!22;UBERON:0000118!5.87e-07!22;UBERON:0004807!6.57e-07!28;UBERON:0000072!7.12e-07!46;UBERON:0005910!7.24e-07!6;UBERON:0008947!7.40e-07!38;UBERON:0003258!7.40e-07!38;UBERON:0003887!7.64e-07!21;UBERON:0000080!8.35e-07!18;UBERON:0002120!8.35e-07!18;UBERON:0004875!8.35e-07!18;UBERON:0005721!8.35e-07!18;UBERON:0005754!8.35e-07!18;UBERON:0007297!8.35e-07!18 | |ontology_enrichment_uberon=UBERON:0004119!1.43e-15!169;UBERON:0000925!1.43e-15!169;UBERON:0006595!1.43e-15!169;UBERON:0000464!1.01e-14!104;UBERON:0001004!5.03e-13!72;UBERON:0006554!3.08e-12!44;UBERON:0000466!3.93e-12!126;UBERON:0005153!4.43e-12!37;UBERON:0001008!9.44e-12!45;UBERON:0005911!1.59e-11!82;UBERON:0005157!6.50e-11!51;UBERON:0000065!1.85e-10!53;UBERON:0000077!2.91e-10!130;UBERON:0003064!5.02e-10!37;UBERON:0001007!8.03e-10!155;UBERON:0001555!8.03e-10!155;UBERON:0007026!8.03e-10!155;UBERON:0005177!2.92e-09!107;UBERON:0005178!4.85e-09!34;UBERON:0002224!4.85e-09!34;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0005181!1.38e-08!35;UBERON:0000161!2.47e-08!35;UBERON:0009569!2.90e-08!113;UBERON:0003101!3.21e-08!22;UBERON:0000079!3.21e-08!22;UBERON:0000058!6.18e-08!26;UBERON:0000064!7.56e-08!219;UBERON:0004921!9.45e-08!129;UBERON:0004185!9.45e-08!129;UBERON:0000344!1.37e-07!12;UBERON:0002553!2.28e-07!70;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0002048!5.87e-07!22;UBERON:0000117!5.87e-07!22;UBERON:0000171!5.87e-07!22;UBERON:0000170!5.87e-07!22;UBERON:0005597!5.87e-07!22;UBERON:0000118!5.87e-07!22;UBERON:0004807!6.57e-07!28;UBERON:0000072!7.12e-07!46;UBERON:0005910!7.24e-07!6;UBERON:0008947!7.40e-07!38;UBERON:0003258!7.40e-07!38;UBERON:0003887!7.64e-07!21;UBERON:0000080!8.35e-07!18;UBERON:0002120!8.35e-07!18;UBERON:0004875!8.35e-07!18;UBERON:0005721!8.35e-07!18;UBERON:0005754!8.35e-07!18;UBERON:0007297!8.35e-07!18 | ||
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| ||
|short_description=p2@CDH3 | |short_description=p2@CDH3 | ||
}} | }} |
Latest revision as of 14:01, 17 September 2015
Short description: | p2@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | -19bp_to_ENST00000542274_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | F5GZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.65e-20 | 106 |
squamous cell carcinoma | 3.23e-17 | 14 |
cell type cancer | 4.32e-14 | 143 |
adenocarcinoma | 3.38e-09 | 25 |