FFCP PHASE1:Hg19::chr6:30294739..30294754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56658 | |EntrezGene=56658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10065 | |HGNC=10065 | ||
|TSSclassifier=strong | |||
|UniProt=A2AAZ3 | |UniProt=A2AAZ3 | ||
|association_with_transcript=5bp_to_ENST00000428404_5end | |association_with_transcript=5bp_to_ENST00000428404_5end | ||
|cluster_id=chr6:30294739..30294754,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_7_at_TRIM39_5end | |description=CAGE_peak_7_at_TRIM39_5end | ||
|id=chr6:30294739..30294754,+ | |id=chr6:30294739..30294754,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.12e-13!140;CL:0002057!4.15e-13!42;CL:0000037!4.61e-12!172;CL:0000566!4.61e-12!172;CL:0000860!1.56e-11!45;CL:0002032!1.71e-11!165;CL:0000837!1.71e-11!165;CL:0000988!6.63e-11!182;CL:0002087!1.29e-09!119;CL:0000766!1.73e-09!76;CL:0002031!3.48e-09!124;CL:0000763!2.33e-08!112;CL:0000049!2.33e-08!112;CL:0000557!2.14e-07!71 | |ontology_enrichment_celltype=CL:0000738!3.12e-13!140;CL:0002057!4.15e-13!42;CL:0000037!4.61e-12!172;CL:0000566!4.61e-12!172;CL:0000860!1.56e-11!45;CL:0002032!1.71e-11!165;CL:0000837!1.71e-11!165;CL:0000988!6.63e-11!182;CL:0002087!1.29e-09!119;CL:0000766!1.73e-09!76;CL:0002031!3.48e-09!124;CL:0000763!2.33e-08!112;CL:0000049!2.33e-08!112;CL:0000557!2.14e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.63e-12;8!CL:0000624;1.94e-11;6!CL:0000576;2.64e-10;48!CL:0000766;3.96e-10;69!CL:0002393;5.75e-10;6!CL:0002397;5.75e-10;6!CL:0000860;6.34e-10;33!CL:0002057;6.34e-10;33!CL:0002087;1.84e-09;104!CL:0000791;8.75e-09;18!CL:0000789;8.75e-09;18!CL:0002419;8.75e-09;18!CL:0000081;3.35e-08;11!CL:0000775;3.55e-07;3!CL:0000623;6.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.58e-29,136;CL:0000037,2.02e-23,168;CL:0002087,6.98e-23,115;CL:0002031,1.97e-22,120;CL:0002032,4.62e-22,161;CL:0000837,4.62e-22,161;CL:0000988,2.50e-21,177;CL:0000860,2.28e-20,42;CL:0002057,2.28e-20,42;CL:0000766,2.37e-19,72;CL:0000473,7.49e-17,48;CL:0000234,7.49e-17,48;CL:0000557,4.62e-15,67;CL:0002009,6.67e-15,61;CL:0002393,2.48e-14,9;CL:0002397,2.48e-14,9;CL:0000763,3.93e-13,108;CL:0000049,3.93e-13,108;CL:0002194,4.34e-13,59;CL:0000576,4.34e-13,59;CL:0000040,4.34e-13,59;CL:0000559,4.34e-13,59;CL:0000839,6.89e-12,66;CL:0000094,7.67e-12,8;CL:0000624,2.41e-11,6;CL:0000838,3.09e-09,52;CL:0000542,5.87e-09,53;CL:0000051,5.87e-09,53;CL:0000791,9.99e-09,18;CL:0000789,9.99e-09,18;CL:0002420,9.99e-09,18;CL:0002419,9.99e-09,18;CL:0000790,9.99e-09,18;CL:0000081,3.36e-08,11;CL:0000775,3.55e-07,3;CL:0000623,6.06e-07,3;CL:0000825,6.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-13;42!CL:0000790;8.75e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-09!102;UBERON:0003061!3.79e-09!102;UBERON:0002193!2.88e-08!112 | |ontology_enrichment_uberon=UBERON:0002390!3.79e-09!102;UBERON:0003061!3.79e-09!102;UBERON:0002193!2.88e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-09;15!UBERON:0000179;1.94e-09;15!UBERON:0000463;1.94e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-19,98;UBERON:0003061,2.09e-19,98;UBERON:0002193,1.69e-16,108;UBERON:0002371,2.73e-13,76;UBERON:0001474,1.35e-12,82;UBERON:0004765,1.02e-10,90;UBERON:0002405,2.69e-10,93;UBERON:0000178,1.30e-09,15;UBERON:0000179,1.30e-09,15;UBERON:0000463,1.30e-09,15;UBERON:0001434,7.96e-09,100 | |||
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| ||
|short_description=p7@TRIM39 | |short_description=p7@TRIM39 | ||
}} | }} |
Latest revision as of 16:29, 17 September 2015
Short description: | p7@TRIM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRIM39_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 5bp_to_ENST00000428404_5end |
EntrezGene: | TRIM39 |
HGNC: | 10065 |
UniProt: | A2AAZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-19 | 98 |
blood island | 2.09e-19 | 98 |
hemolymphoid system | 1.69e-16 | 108 |
bone marrow | 2.73e-13 | 76 |
bone element | 1.35e-12 | 82 |
skeletal element | 1.02e-10 | 90 |
immune system | 2.69e-10 | 93 |
blood | 1.30e-09 | 15 |
haemolymphatic fluid | 1.30e-09 | 15 |
organism substance | 1.30e-09 | 15 |
skeletal system | 7.96e-09 | 100 |