FFCP PHASE1:Hg19::chr1:156611960..156611974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63827 | |EntrezGene=63827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23059 | |HGNC=23059 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000479949_5end | |association_with_transcript=36bp_to_ENST00000479949_5end | ||
|cluster_id=chr1:156611960..156611974,+ | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_3_at_BCAN_5end | |description=CAGE_peak_3_at_BCAN_5end | ||
|id=chr1:156611960..156611974,+ | |id=chr1:156611960..156611974,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.49e-14!10;CL:0000541!1.49e-14!10;CL:0000047!3.23e-13!8;CL:0000147!8.31e-10!14;CL:0000540!8.77e-10!6;CL:0000031!8.77e-10!6;CL:0000404!8.77e-10!6;CL:0000133!8.76e-07!59 | |ontology_enrichment_celltype=CL:0000148!1.49e-14!10;CL:0000541!1.49e-14!10;CL:0000047!3.23e-13!8;CL:0000147!8.31e-10!14;CL:0000540!8.77e-10!6;CL:0000031!8.77e-10!6;CL:0000404!8.77e-10!6;CL:0000133!8.76e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.23e-13;10!CL:0000147;7.22e-09;14!CL:0002567;2.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.78e-13,10;CL:0000541,6.78e-13,10;CL:0000147,6.91e-09,14;CL:0002567,2.15e-08,3;CL:0000047,7.87e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-18;82!UBERON:0006241;5.27e-09;3!UBERON:0003057;5.27e-09;3!UBERON:0006215;4.17e-08;3!UBERON:0010122;8.35e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.83e-78!82;UBERON:0005743!1.17e-76!86;UBERON:0000073!4.48e-75!94;UBERON:0001016!4.48e-75!94;UBERON:0001049!1.71e-74!57;UBERON:0005068!1.71e-74!57;UBERON:0006241!1.71e-74!57;UBERON:0007135!1.71e-74!57;UBERON:0002616!5.26e-62!59;UBERON:0002780!1.85e-60!41;UBERON:0001890!1.85e-60!41;UBERON:0006240!1.85e-60!41;UBERON:0003080!9.44e-59!42;UBERON:0000955!3.66e-58!69;UBERON:0006238!3.66e-58!69;UBERON:0003075!1.70e-52!86;UBERON:0007284!1.70e-52!86;UBERON:0001893!4.77e-52!34;UBERON:0002020!8.38e-52!34;UBERON:0003528!8.38e-52!34;UBERON:0002346!2.37e-51!90;UBERON:0002791!2.81e-50!33;UBERON:0001869!1.75e-48!32;UBERON:0007023!1.30e-43!115;UBERON:0004121!3.70e-40!169;UBERON:0000924!4.68e-40!173;UBERON:0006601!4.68e-40!173;UBERON:0003056!4.97e-39!61;UBERON:0002619!3.48e-38!22;UBERON:0000956!7.43e-36!25;UBERON:0000203!7.43e-36!25;UBERON:0001950!2.33e-34!20;UBERON:0000033!2.28e-30!123;UBERON:0000153!3.09e-28!129;UBERON:0007811!3.09e-28!129;UBERON:0002420!7.59e-18!9;UBERON:0007245!7.59e-18!9;UBERON:0010009!7.59e-18!9;UBERON:0010011!7.59e-18!9;UBERON:0000454!7.59e-18!9;UBERON:0002308!2.61e-17!9;UBERON:0000125!2.61e-17!9;UBERON:0003076!3.01e-16!15;UBERON:0003057!3.01e-16!15;UBERON:0009663!5.14e-14!7;UBERON:0000025!1.20e-13!194;UBERON:0004732!3.15e-13!13;UBERON:0001871!2.20e-12!7;UBERON:0000200!1.06e-11!6;UBERON:0004733!1.81e-11!12;UBERON:0002028!1.81e-11!12;UBERON:0007277!1.81e-11!12;UBERON:0002298!2.95e-11!8;UBERON:0000349!4.20e-11!5;UBERON:0001872!3.16e-10!5;UBERON:0002021!4.36e-10!5;UBERON:0001894!1.20e-09!7;UBERON:0006222!1.20e-09!7;UBERON:0000369!6.71e-09!4;UBERON:0002435!6.71e-09!4;UBERON:0000204!6.71e-09!4;UBERON:0010082!6.71e-09!4;UBERON:0004111!6.90e-09!241;UBERON:0000064!9.04e-08!219;UBERON:0000483!1.82e-07!309;UBERON:0000119!2.94e-07!312;UBERON:0002680!4.00e-07!9;UBERON:0001895!4.00e-07!9;UBERON:0010092!4.00e-07!9;UBERON:0005383!4.30e-07!3;UBERON:0005382!4.30e-07!3;UBERON:0000922!4.99e-07!612;UBERON:0002240!8.22e-07!3;UBERON:0000477!8.41e-07!286;UBERON:0002771!9.60e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.83e-78!82;UBERON:0005743!1.17e-76!86;UBERON:0000073!4.48e-75!94;UBERON:0001016!4.48e-75!94;UBERON:0001049!1.71e-74!57;UBERON:0005068!1.71e-74!57;UBERON:0006241!1.71e-74!57;UBERON:0007135!1.71e-74!57;UBERON:0002616!5.26e-62!59;UBERON:0002780!1.85e-60!41;UBERON:0001890!1.85e-60!41;UBERON:0006240!1.85e-60!41;UBERON:0003080!9.44e-59!42;UBERON:0000955!3.66e-58!69;UBERON:0006238!3.66e-58!69;UBERON:0003075!1.70e-52!86;UBERON:0007284!1.70e-52!86;UBERON:0001893!4.77e-52!34;UBERON:0002020!8.38e-52!34;UBERON:0003528!8.38e-52!34;UBERON:0002346!2.37e-51!90;UBERON:0002791!2.81e-50!33;UBERON:0001869!1.75e-48!32;UBERON:0007023!1.30e-43!115;UBERON:0004121!3.70e-40!169;UBERON:0000924!4.68e-40!173;UBERON:0006601!4.68e-40!173;UBERON:0003056!4.97e-39!61;UBERON:0002619!3.48e-38!22;UBERON:0000956!7.43e-36!25;UBERON:0000203!7.43e-36!25;UBERON:0001950!2.33e-34!20;UBERON:0000033!2.28e-30!123;UBERON:0000153!3.09e-28!129;UBERON:0007811!3.09e-28!129;UBERON:0002420!7.59e-18!9;UBERON:0007245!7.59e-18!9;UBERON:0010009!7.59e-18!9;UBERON:0010011!7.59e-18!9;UBERON:0000454!7.59e-18!9;UBERON:0002308!2.61e-17!9;UBERON:0000125!2.61e-17!9;UBERON:0003076!3.01e-16!15;UBERON:0003057!3.01e-16!15;UBERON:0009663!5.14e-14!7;UBERON:0000025!1.20e-13!194;UBERON:0004732!3.15e-13!13;UBERON:0001871!2.20e-12!7;UBERON:0000200!1.06e-11!6;UBERON:0004733!1.81e-11!12;UBERON:0002028!1.81e-11!12;UBERON:0007277!1.81e-11!12;UBERON:0002298!2.95e-11!8;UBERON:0000349!4.20e-11!5;UBERON:0001872!3.16e-10!5;UBERON:0002021!4.36e-10!5;UBERON:0001894!1.20e-09!7;UBERON:0006222!1.20e-09!7;UBERON:0000369!6.71e-09!4;UBERON:0002435!6.71e-09!4;UBERON:0000204!6.71e-09!4;UBERON:0010082!6.71e-09!4;UBERON:0004111!6.90e-09!241;UBERON:0000064!9.04e-08!219;UBERON:0000483!1.82e-07!309;UBERON:0000119!2.94e-07!312;UBERON:0002680!4.00e-07!9;UBERON:0001895!4.00e-07!9;UBERON:0010092!4.00e-07!9;UBERON:0005383!4.30e-07!3;UBERON:0005382!4.30e-07!3;UBERON:0000922!4.99e-07!612;UBERON:0002240!8.22e-07!3;UBERON:0000477!8.41e-07!286;UBERON:0002771!9.60e-07!3 | ||
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|short_description=p3@BCAN | |short_description=p3@BCAN | ||
}} | }} |
Latest revision as of 16:51, 17 September 2015
Short description: | p3@BCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCAN_5end |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | 36bp_to_ENST00000479949_5end |
EntrezGene: | BCAN |
HGNC: | 23059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.78e-13 | 10 |
melanoblast | 6.78e-13 | 10 |
pigment cell | 6.91e-09 | 14 |
light melanocyte | 2.15e-08 | 3 |
neuronal stem cell | 7.87e-08 | 8 |