FFCP PHASE1:Hg19::chr10:26727246..26727322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54518 | |EntrezGene=54518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17379 | |HGNC=17379 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWJ6,Q7Z5R6,Q8IYL7 | |UniProt=Q9NWJ6,Q7Z5R6,Q8IYL7 | ||
|association_with_transcript=0bp_to_ENST00000490118,NM_019043,uc001isr.2,uc001iss.2,uc009xks.1_5end | |association_with_transcript=0bp_to_ENST00000490118,NM_019043,uc001isr.2,uc001iss.2,uc009xks.1_5end | ||
|cluster_id=chr10:26727246..26727322,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_APBB1IP_5end | |description=CAGE_peak_1_at_APBB1IP_5end | ||
|id=chr10:26727246..26727322,+ | |id=chr10:26727246..26727322,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.34e-43!172;CL:0000566!5.34e-43!172;CL:0002032!5.21e-40!165;CL:0000837!5.21e-40!165;CL:0000988!2.63e-38!182;CL:0000738!1.03e-37!140;CL:0000763!3.93e-34!112;CL:0000049!3.93e-34!112;CL:0002087!4.61e-33!119;CL:0000766!4.82e-31!76;CL:0002031!2.18e-29!124;CL:0002194!1.39e-28!63;CL:0000576!1.39e-28!63;CL:0000040!1.39e-28!63;CL:0000559!1.39e-28!63;CL:0002009!2.91e-28!65;CL:0000557!1.19e-26!71;CL:0000134!9.24e-26!358;CL:0000839!1.10e-25!70;CL:0002057!3.57e-25!42;CL:0002320!4.38e-24!365;CL:0000860!1.39e-21!45;CL:0000219!1.61e-17!390;CL:0000048!2.58e-11!430;CL:0000723!4.42e-10!436;CL:0000034!4.79e-10!444;CL:0000945!4.05e-07!24;CL:0000826!4.05e-07!24 | |ontology_enrichment_celltype=CL:0000037!5.34e-43!172;CL:0000566!5.34e-43!172;CL:0002032!5.21e-40!165;CL:0000837!5.21e-40!165;CL:0000988!2.63e-38!182;CL:0000738!1.03e-37!140;CL:0000763!3.93e-34!112;CL:0000049!3.93e-34!112;CL:0002087!4.61e-33!119;CL:0000766!4.82e-31!76;CL:0002031!2.18e-29!124;CL:0002194!1.39e-28!63;CL:0000576!1.39e-28!63;CL:0000040!1.39e-28!63;CL:0000559!1.39e-28!63;CL:0002009!2.91e-28!65;CL:0000557!1.19e-26!71;CL:0000134!9.24e-26!358;CL:0000839!1.10e-25!70;CL:0002057!3.57e-25!42;CL:0002320!4.38e-24!365;CL:0000860!1.39e-21!45;CL:0000219!1.61e-17!390;CL:0000048!2.58e-11!430;CL:0000723!4.42e-10!436;CL:0000034!4.79e-10!444;CL:0000945!4.05e-07!24;CL:0000826!4.05e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-20;33!CL:0002057;4.04e-20;33!CL:0000576;1.71e-19;48!CL:0000473;1.10e-18;39!CL:0000234;1.10e-18;39!CL:0000766;1.60e-14;69!CL:0000763;7.04e-13;100!CL:0002087;2.31e-10;104!CL:0000738;2.87e-09;136!CL:0000945;1.69e-07;24!CL:0000988;2.18e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.20e-46,168;CL:0002032,9.61e-43,161;CL:0000837,9.61e-43,161;CL:0000988,1.54e-40,177;CL:0000738,1.01e-39,136;CL:0000763,7.40e-38,108;CL:0000049,7.40e-38,108;CL:0002087,9.05e-37,115;CL:0002194,2.38e-34,59;CL:0000576,2.38e-34,59;CL:0000040,2.38e-34,59;CL:0000559,2.38e-34,59;CL:0000766,2.90e-34,72;CL:0002009,7.09e-34,61;CL:0002031,7.61e-31,120;CL:0000557,1.81e-29,67;CL:0000473,5.99e-29,48;CL:0000234,5.99e-29,48;CL:0000839,2.07e-28,66;CL:0000860,9.93e-27,42;CL:0002057,9.93e-27,42;CL:0000134,1.05e-24,354;CL:0002320,1.29e-22,361;CL:0000219,5.19e-17,386;CL:0000048,1.65e-10,427;CL:0000723,1.76e-09,433;CL:0000034,2.51e-09,441;CL:0000945,1.74e-07,24;CL:0000826,1.74e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-19;42!CL:0000049;3.50e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!8.77e-08!51;DOID:0060083!8.77e-08!51 | |ontology_enrichment_disease=DOID:2531!8.77e-08!51;DOID:0060083!8.77e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-08,51;DOID:0060083,1.62e-08,51;DOID:1240,4.57e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-34!102;UBERON:0003061!3.67e-34!102;UBERON:0002193!8.68e-30!112;UBERON:0007023!6.27e-27!115;UBERON:0002371!1.56e-25!80;UBERON:0002384!8.63e-23!375;UBERON:0001474!2.04e-21!86;UBERON:0002405!2.85e-19!115;UBERON:0004765!5.54e-18!101;UBERON:0001434!5.54e-18!101;UBERON:0001049!5.80e-10!57;UBERON:0005068!5.80e-10!57;UBERON:0006241!5.80e-10!57;UBERON:0007135!5.80e-10!57;UBERON:0003080!1.69e-08!42;UBERON:0002780!3.11e-08!41;UBERON:0001890!3.11e-08!41;UBERON:0006240!3.11e-08!41;UBERON:0000178!4.09e-07!15;UBERON:0000179!4.09e-07!15;UBERON:0000463!4.09e-07!15;UBERON:0001893!6.17e-07!34;UBERON:0002020!8.21e-07!34;UBERON:0003528!8.21e-07!34;UBERON:0002616!9.84e-07!59 | |ontology_enrichment_uberon=UBERON:0002390!3.67e-34!102;UBERON:0003061!3.67e-34!102;UBERON:0002193!8.68e-30!112;UBERON:0007023!6.27e-27!115;UBERON:0002371!1.56e-25!80;UBERON:0002384!8.63e-23!375;UBERON:0001474!2.04e-21!86;UBERON:0002405!2.85e-19!115;UBERON:0004765!5.54e-18!101;UBERON:0001434!5.54e-18!101;UBERON:0001049!5.80e-10!57;UBERON:0005068!5.80e-10!57;UBERON:0006241!5.80e-10!57;UBERON:0007135!5.80e-10!57;UBERON:0003080!1.69e-08!42;UBERON:0002780!3.11e-08!41;UBERON:0001890!3.11e-08!41;UBERON:0006240!3.11e-08!41;UBERON:0000178!4.09e-07!15;UBERON:0000179!4.09e-07!15;UBERON:0000463!4.09e-07!15;UBERON:0001893!6.17e-07!34;UBERON:0002020!8.21e-07!34;UBERON:0003528!8.21e-07!34;UBERON:0002616!9.84e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;3.34e-08;32!UBERON:0007023;1.25e-07;114!UBERON:0002780;6.17e-07;41!UBERON:0001890;6.17e-07;41 | |||
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|short_description=p1@APBB1IP | |short_description=p1@APBB1IP | ||
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Latest revision as of 17:58, 17 September 2015
Short description: | p1@APBB1IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APBB1IP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000490118, NM_019043, uc001isr.2, uc001iss.2, uc009xks.1_5end |
EntrezGene: | APBB1IP |
HGNC: | 17379 |
UniProt: | Q9NWJ6Q7Z5R6Q8IYL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.20e-46 | 168 |
hematopoietic oligopotent progenitor cell | 9.61e-43 | 161 |
hematopoietic multipotent progenitor cell | 9.61e-43 | 161 |
hematopoietic cell | 1.54e-40 | 177 |
leukocyte | 1.01e-39 | 136 |
myeloid cell | 7.40e-38 | 108 |
common myeloid progenitor | 7.40e-38 | 108 |
nongranular leukocyte | 9.05e-37 | 115 |
monopoietic cell | 2.38e-34 | 59 |
monocyte | 2.38e-34 | 59 |
monoblast | 2.38e-34 | 59 |
promonocyte | 2.38e-34 | 59 |
myeloid leukocyte | 2.90e-34 | 72 |
macrophage dendritic cell progenitor | 7.09e-34 | 61 |
hematopoietic lineage restricted progenitor cell | 7.61e-31 | 120 |
granulocyte monocyte progenitor cell | 1.81e-29 | 67 |
defensive cell | 5.99e-29 | 48 |
phagocyte | 5.99e-29 | 48 |
myeloid lineage restricted progenitor cell | 2.07e-28 | 66 |
classical monocyte | 9.93e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-27 | 42 |
mesenchymal cell | 1.05e-24 | 354 |
connective tissue cell | 1.29e-22 | 361 |
motile cell | 5.19e-17 | 386 |
multi fate stem cell | 1.65e-10 | 427 |
somatic stem cell | 1.76e-09 | 433 |
stem cell | 2.51e-09 | 441 |
lymphocyte of B lineage | 1.74e-07 | 24 |
pro-B cell | 1.74e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.00e-36 | 98 |
blood island | 1.00e-36 | 98 |
hemolymphoid system | 5.32e-32 | 108 |
bone marrow | 2.27e-28 | 76 |
adult organism | 1.83e-27 | 114 |
immune system | 3.32e-26 | 93 |
bone element | 9.99e-24 | 82 |
connective tissue | 2.18e-21 | 371 |
skeletal element | 1.11e-18 | 90 |
skeletal system | 2.14e-18 | 100 |
neural tube | 1.19e-10 | 56 |
neural rod | 1.19e-10 | 56 |
future spinal cord | 1.19e-10 | 56 |
neural keel | 1.19e-10 | 56 |
regional part of nervous system | 1.41e-09 | 53 |
regional part of brain | 1.41e-09 | 53 |
regional part of forebrain | 6.85e-09 | 41 |
forebrain | 6.85e-09 | 41 |
anterior neural tube | 6.85e-09 | 41 |
future forebrain | 6.85e-09 | 41 |
tissue | 3.72e-08 | 773 |
telencephalon | 1.66e-07 | 34 |
brain grey matter | 2.26e-07 | 34 |
gray matter | 2.26e-07 | 34 |
regional part of telencephalon | 8.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.62e-08 | 51 |
immune system cancer | 1.62e-08 | 51 |
leukemia | 4.57e-07 | 39 |