FFCP PHASE1:Hg19::chr4:40632879..40632880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBP6 | |UniProt=D6RBP6 | ||
|association_with_transcript=11bp_to_ENST00000511598_5end | |association_with_transcript=11bp_to_ENST00000511598_5end | ||
|cluster_id=chr4:40632879..40632880,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_24_at_RBM47_5end | |description=CAGE_peak_24_at_RBM47_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.44e-59!76;CL:0002057!9.79e-57!42;CL:0002009!8.10e-56!65;CL:0002194!1.42e-55!63;CL:0000576!1.42e-55!63;CL:0000040!1.42e-55!63;CL:0000559!1.42e-55!63;CL:0000860!4.97e-52!45;CL:0000557!7.65e-52!71;CL:0000839!1.60e-50!70;CL:0000738!6.36e-46!140;CL:0000763!1.08e-42!112;CL:0000049!1.08e-42!112;CL:0002087!2.19e-36!119;CL:0000037!9.88e-36!172;CL:0000566!9.88e-36!172;CL:0002031!1.18e-32!124;CL:0000988!1.45e-32!182;CL:0002032!1.11e-31!165;CL:0000837!1.11e-31!165;CL:0002393!4.83e-11!9;CL:0002397!4.83e-11!9;CL:0000451!1.36e-08!10;CL:0000990!3.00e-08!8;CL:0000094!6.31e-08!8;CL:0000134!6.74e-07!358 | |ontology_enrichment_celltype=CL:0000766!1.44e-59!76;CL:0002057!9.79e-57!42;CL:0002009!8.10e-56!65;CL:0002194!1.42e-55!63;CL:0000576!1.42e-55!63;CL:0000040!1.42e-55!63;CL:0000559!1.42e-55!63;CL:0000860!4.97e-52!45;CL:0000557!7.65e-52!71;CL:0000839!1.60e-50!70;CL:0000738!6.36e-46!140;CL:0000763!1.08e-42!112;CL:0000049!1.08e-42!112;CL:0002087!2.19e-36!119;CL:0000037!9.88e-36!172;CL:0000566!9.88e-36!172;CL:0002031!1.18e-32!124;CL:0000988!1.45e-32!182;CL:0002032!1.11e-31!165;CL:0000837!1.11e-31!165;CL:0002393!4.83e-11!9;CL:0002397!4.83e-11!9;CL:0000451!1.36e-08!10;CL:0000990!3.00e-08!8;CL:0000094!6.31e-08!8;CL:0000134!6.74e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-48;33!CL:0002057;2.27e-48;33!CL:0000576;2.82e-44;48!CL:0000473;2.32e-33;39!CL:0000234;2.32e-33;39!CL:0000766;1.41e-24;69!CL:0000763;1.85e-12;100!CL:0002393;1.34e-11;6!CL:0002397;1.34e-11;6!CL:0000775;1.96e-11;3!CL:0002619;9.33e-11;3!CL:0000094;2.28e-09;8!CL:0002087;2.45e-09;104!CL:0000738;1.06e-08;136!CL:0000081;6.26e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;2.27e-48;33!CL:0002057;2.27e-48;33!CL:0000576;2.82e-44;48!CL:0000473;2.32e-33;39!CL:0000234;2.32e-33;39!CL:0000766;1.41e-24;69!CL:0000763;1.85e-12;100!CL:0002393;1.34e-11;6!CL:0002397;1.34e-11;6!CL:0000775;1.96e-11;3!CL:0002619;9.33e-11;3!CL:0000094;2.28e-09;8!CL:0002087;2.45e-09;104!CL:0000738;1.06e-08;136!CL:0000081;6.26e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-59,42;CL:0002057,1.50e-59,42;CL:0000766,1.83e-54,72;CL:0000473,1.09e-51,48;CL:0000234,1.09e-51,48;CL:0002194,2.68e-50,59;CL:0000576,2.68e-50,59;CL:0000040,2.68e-50,59;CL:0000559,2.68e-50,59;CL:0002009,1.47e-48,61;CL:0000839,1.16e-44,66;CL:0000557,5.94e-44,67;CL:0000763,3.53e-35,108;CL:0000049,3.53e-35,108;CL:0000738,3.60e-27,136;CL:0002087,3.15e-24,115;CL:0002031,4.53e-23,120;CL:0002032,2.38e-22,161;CL:0000837,2.38e-22,161;CL:0000037,2.96e-21,168;CL:0000988,5.67e-20,177;CL:0000775,1.97e-11,3;CL:0002619,5.15e-11,3;CL:0000094,2.22e-09,8;CL:0000134,6.77e-08,354;CL:0002393,1.05e-07,9;CL:0002397,1.05e-07,9;CL:0002320,1.17e-07,361;CL:0000081,6.14e-07,11;CL:0000219,8.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-39;42!CL:0000049;3.16e-13;108 | |ontology_enrichment_development_v019=CL:0002057;2.87e-39;42!CL:0000049;3.16e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-56!102;UBERON:0003061!1.52e-56!102;UBERON:0002193!3.67e-53!112;UBERON:0002371!4.34e-46!80;UBERON:0001474!1.03e-41!86;UBERON:0002405!1.23e-36!115;UBERON:0004765!4.49e-33!101;UBERON:0001434!4.49e-33!101;UBERON:0003081!8.25e-19!216;UBERON:0002204!1.21e-14!167;UBERON:0007023!4.44e-10!115;UBERON:0000178!3.10e-08!15;UBERON:0000179!3.10e-08!15;UBERON:0000463!3.10e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.52e-56!102;UBERON:0003061!1.52e-56!102;UBERON:0002193!3.67e-53!112;UBERON:0002371!4.34e-46!80;UBERON:0001474!1.03e-41!86;UBERON:0002405!1.23e-36!115;UBERON:0004765!4.49e-33!101;UBERON:0001434!4.49e-33!101;UBERON:0003081!8.25e-19!216;UBERON:0002204!1.21e-14!167;UBERON:0007023!4.44e-10!115;UBERON:0000178!3.10e-08!15;UBERON:0000179!3.10e-08!15;UBERON:0000463!3.10e-08!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.71e-39,98;UBERON:0003061,7.71e-39,98;UBERON:0002371,2.19e-38,76;UBERON:0001474,2.41e-35,82;UBERON:0002193,6.51e-35,108;UBERON:0004765,6.53e-32,90;UBERON:0002405,8.95e-31,93;UBERON:0001434,2.20e-28,100;UBERON:0003081,9.27e-17,203;UBERON:0002204,1.50e-15,167;UBERON:0000926,2.56e-09,315;UBERON:0004120,2.56e-09,315;UBERON:0006603,2.56e-09,315;UBERON:0002384,2.46e-07,371 | |||
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|short_description=p24@RBM47 | |short_description=p24@RBM47 | ||
}} | }} |
Latest revision as of 18:54, 17 September 2015
Short description: | p24@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_RBM47_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 11bp_to_ENST00000511598_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | D6RBP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.71e-39 | 98 |
blood island | 7.71e-39 | 98 |
bone marrow | 2.19e-38 | 76 |
bone element | 2.41e-35 | 82 |
hemolymphoid system | 6.51e-35 | 108 |
skeletal element | 6.53e-32 | 90 |
immune system | 8.95e-31 | 93 |
skeletal system | 2.20e-28 | 100 |
lateral plate mesoderm | 9.27e-17 | 203 |
musculoskeletal system | 1.50e-15 | 167 |
mesoderm | 2.56e-09 | 315 |
mesoderm-derived structure | 2.56e-09 | 315 |
presumptive mesoderm | 2.56e-09 | 315 |
connective tissue | 2.46e-07 | 371 |