FFCP PHASE1:Hg19::chr16:84230636..84230666,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1P8 | |||
|association_with_transcript=0bp_to_ENST00000536986,uc002fhs.1_5end | |||
|cluster_id=chr16:84230636..84230666,- | |||
|coexpression_cluster_id=C2391 | |||
|description=CAGE_peak_1_at_ENST00000536986_5end,CAGE_peak_1_at_uc002fhs.1_5end | |||
|id=chr16:84230636..84230666,- | |||
|ontology_enrichment_celltype=CL:0002076!1.29e-13!43;CL:0000223!3.79e-10!59;CL:0002251!3.74e-09!21;CL:0000240!2.48e-07!6;CL:0000311!2.48e-07!6;CL:0000079!2.48e-07!6;CL:0000237!2.48e-07!6;CL:0000036!2.48e-07!6;CL:0000357!2.48e-07!6;CL:0000114!2.48e-07!6;CL:0000244!4.31e-07!4;CL:0000731!4.31e-07!4;CL:0002159!5.86e-07!13;CL:0000575!6.86e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.45e-09;20!CL:0002336;7.55e-09;1!CL:0002261;7.55e-09;1!CL:0002252;7.55e-09;1!CL:0002170;7.55e-09;1!CL:0000244;1.28e-08;4!CL:0000731;1.28e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.62e-09,20;CL:0002252,4.91e-09,1;CL:0002336,1.07e-08,1;CL:0002261,1.07e-08,1;CL:0002170,1.07e-08,1;CL:0000076,1.13e-08,63;CL:0000244,1.21e-08,4;CL:0000731,1.21e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.96e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!3.20e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.46e-20;14!DOID:3151;1.74e-09;1!DOID:3149;1.74e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.94e-20,14;DOID:3151,1.74e-09,1;DOID:3149,1.74e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!4.53e-16!35;UBERON:0003729!1.30e-14!5;UBERON:0000974!5.55e-13!10;UBERON:0003343!4.22e-12!4;UBERON:0004785!4.22e-12!4;UBERON:0000166!1.82e-11!21;UBERON:0003102!2.18e-11!95;UBERON:0001004!5.35e-11!72;UBERON:0000344!1.03e-10!12;UBERON:0000165!7.49e-10!28;UBERON:0000930!7.49e-10!28;UBERON:0004119!1.60e-09!169;UBERON:0000925!1.60e-09!169;UBERON:0006595!1.60e-09!169;UBERON:0001444!2.00e-09!48;UBERON:0001723!3.58e-09!3;UBERON:0001033!3.58e-09!3;UBERON:0010056!3.58e-09!3;UBERON:0000365!4.97e-09!5;UBERON:0000065!1.05e-07!53;UBERON:0005910!1.61e-07!6;UBERON:0001008!5.24e-07!45;UBERON:0003127!7.90e-07!2;UBERON:0000341!9.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;4.10e-21;6!UBERON:0003343;1.73e-18;4!UBERON:0004785;1.73e-18;4!UBERON:0003127;5.54e-16;2!UBERON:0000165;9.38e-13;28!UBERON:0001043;2.38e-11;3!UBERON:0001723;5.70e-11;3!UBERON:0001033;5.70e-11;3!UBERON:0003729;7.57e-10;13!UBERON:0000344;1.19e-09;20!UBERON:0000997;2.21e-09;1!UBERON:0005056;2.21e-09;1!UBERON:0004176;2.21e-09;1!UBERON:0002372;3.30e-09;1!UBERON:0007029;3.30e-09;1!UBERON:0001961;3.30e-09;1!UBERON:0001744;3.30e-09;1!UBERON:0001042;3.30e-09;1!UBERON:0001735;3.30e-09;1!UBERON:0000014;6.23e-09;4!UBERON:0000996;7.55e-09;1!UBERON:0000365;4.63e-07;5!UBERON:0000161;7.66e-07;19!UBERON:0000166;7.66e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.61e-18,4;UBERON:0004785,2.61e-18,4;UBERON:0003127,5.14e-16,2;UBERON:0000974,1.11e-12,10;UBERON:0000161,1.46e-12,36;UBERON:0000166,3.18e-12,22;UBERON:0000165,3.20e-12,29;UBERON:0000930,3.20e-12,29;UBERON:0001043,1.84e-11,3;UBERON:0009143,1.84e-11,3;UBERON:0001723,4.66e-11,3;UBERON:0001033,4.66e-11,3;UBERON:0010056,4.66e-11,3;UBERON:0003102,9.24e-11,99;UBERON:0003729,9.87e-10,13;UBERON:0000344,1.51e-09,20;UBERON:0000997,2.22e-09,1;UBERON:0005056,2.22e-09,1;UBERON:0007029,3.05e-09,1;UBERON:0002372,3.58e-09,1;UBERON:0001961,3.58e-09,1;UBERON:0001744,3.58e-09,1;UBERON:0001735,3.58e-09,1;UBERON:0001444,5.24e-09,49;UBERON:0000014,5.99e-09,4;UBERON:0000996,7.27e-09,1;UBERON:0000153,1.06e-08,62;UBERON:0007811,1.06e-08,62;UBERON:0004119,6.48e-08,160;UBERON:0000925,6.48e-08,160;UBERON:0006595,6.48e-08,160;UBERON:0000033,9.55e-08,56;UBERON:0001042,1.96e-07,10;UBERON:0009145,1.96e-07,10;UBERON:0000365,4.43e-07,5;UBERON:0006562,8.48e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,1.68471475667626,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,2.73104275885199,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,2.37020365273626,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5277263069176,0.174118413160805,0.52418000472609,0,0,0,0,4.26751672549045,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,8.72130187758092,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8943967536138,2.12345502025933,2.01771458373847,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0,0,1.0989032999072,0,0,0,0,0,0.428859265059938,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.49263787330687,0.714193294391221,0.0645889098360061,0,0,0,0,1.30630048738177,1.71116650542641,2.22261774948139,1.2192774916755,1.66330178273007,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p1@ENST00000536986,p1@uc002fhs.1 | |||
}} |
Latest revision as of 03:28, 18 September 2015
Short description: | p1@ENST00000536986, p1@uc002fhs.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000536986_5end, CAGE_peak_1_at_uc002fhs.1_5end |
Coexpression cluster: | C2391_oral_keratoacanthoma_epidermoid_esophagus_bronchial_malignant_Corneal |
Association with transcript: | 0bp_to_ENST00000536986, uc002fhs.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.62e-09 | 20 |
epithelial cell of esophagus | 4.91e-09 | 1 |
buccal mucosa cell | 1.07e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.07e-08 | 1 |
keratinized cell of the oral mucosa | 1.07e-08 | 1 |
squamous epithelial cell | 1.13e-08 | 63 |
transitional epithelial cell | 1.21e-08 | 4 |
urothelial cell | 1.21e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.61e-18 | 4 |
respiratory system mucosa | 2.61e-18 | 4 |
open tracheal system trachea | 5.14e-16 | 2 |
neck | 1.11e-12 | 10 |
orifice | 1.46e-12 | 36 |
oral opening | 3.18e-12 | 22 |
mouth | 3.20e-12 | 29 |
stomodeum | 3.20e-12 | 29 |
esophagus | 1.84e-11 | 3 |
esophageal region | 1.84e-11 | 3 |
tongue | 4.66e-11 | 3 |
gustatory system | 4.66e-11 | 3 |
future tongue | 4.66e-11 | 3 |
surface structure | 9.24e-11 | 99 |
mouth mucosa | 9.87e-10 | 13 |
mucosa | 1.51e-09 | 20 |
mammalian vulva | 2.22e-09 | 1 |
external female genitalia | 2.22e-09 | 1 |
surface | 3.05e-09 | 1 |
tonsil | 3.58e-09 | 1 |
mucosa-associated lymphoid tissue | 3.58e-09 | 1 |
lymphoid tissue | 3.58e-09 | 1 |
tonsillar ring | 3.58e-09 | 1 |
subdivision of head | 5.24e-09 | 49 |
zone of skin | 5.99e-09 | 4 |
vagina | 7.27e-09 | 1 |
anterior region of body | 1.06e-08 | 62 |
craniocervical region | 1.06e-08 | 62 |
endoderm-derived structure | 6.48e-08 | 160 |
endoderm | 6.48e-08 | 160 |
presumptive endoderm | 6.48e-08 | 160 |
head | 9.55e-08 | 56 |
chordate pharynx | 1.96e-07 | 10 |
pharyngeal region of foregut | 1.96e-07 | 10 |
urothelium | 4.43e-07 | 5 |
pharynx | 8.48e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.94e-20 | 14 |
skin squamous cell carcinoma | 1.74e-09 | 1 |
keratoacanthoma | 1.74e-09 | 1 |