FFCP PHASE1:Hg19::chr1:160765860..160765870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4063 | |EntrezGene=4063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6730 | |HGNC=6730 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000474998_5end | |association_with_transcript=-25bp_to_ENST00000474998_5end | ||
|cluster_id=chr1:160765860..160765870,+ | |||
|description=CAGE_peak_5_at_LY9_5end | |description=CAGE_peak_5_at_LY9_5end | ||
|id=chr1:160765860..160765870,+ | |id=chr1:160765860..160765870,+ | ||
|ontology_enrichment_celltype=CL:0002087!9.51e-51!119;CL:0000738!3.49e-46!140;CL:0002031!1.84e-44!124;CL:0000037!8.69e-34!172;CL:0000566!8.69e-34!172;CL:0002032!1.86e-33!165;CL:0000837!1.86e-33!165;CL:0000542!1.16e-32!53;CL:0000051!1.16e-32!53;CL:0000838!2.18e-31!52;CL:0000988!8.04e-31!182;CL:0002057!5.43e-21!42;CL:0000791!1.74e-20!18;CL:0000789!1.74e-20!18;CL:0002420!1.74e-20!18;CL:0002419!1.74e-20!18;CL:0000790!1.74e-20!18;CL:0000860!4.48e-19!45;CL:0000945!1.06e-17!24;CL:0000826!1.06e-17!24;CL:0002009!1.41e-17!65;CL:0002194!4.79e-17!63;CL:0000576!4.79e-17!63;CL:0000040!4.79e-17!63;CL:0000559!4.79e-17!63;CL:0000557!2.36e-15!71;CL:0000766!7.68e-15!76;CL:0000839!1.67e-14!70;CL:0000084!1.61e-13!25;CL:0000827!1.61e-13!25;CL:0000625!1.25e-12!11;CL:0000236!9.92e-10!14;CL:0000763!9.79e-09!112;CL:0000049!9.79e-09!112;CL:0000624!6.15e-08!6;CL:0000134!3.96e-07!358 | |ontology_enrichment_celltype=CL:0002087!9.51e-51!119;CL:0000738!3.49e-46!140;CL:0002031!1.84e-44!124;CL:0000037!8.69e-34!172;CL:0000566!8.69e-34!172;CL:0002032!1.86e-33!165;CL:0000837!1.86e-33!165;CL:0000542!1.16e-32!53;CL:0000051!1.16e-32!53;CL:0000838!2.18e-31!52;CL:0000988!8.04e-31!182;CL:0002057!5.43e-21!42;CL:0000791!1.74e-20!18;CL:0000789!1.74e-20!18;CL:0002420!1.74e-20!18;CL:0002419!1.74e-20!18;CL:0000790!1.74e-20!18;CL:0000860!4.48e-19!45;CL:0000945!1.06e-17!24;CL:0000826!1.06e-17!24;CL:0002009!1.41e-17!65;CL:0002194!4.79e-17!63;CL:0000576!4.79e-17!63;CL:0000040!4.79e-17!63;CL:0000559!4.79e-17!63;CL:0000557!2.36e-15!71;CL:0000766!7.68e-15!76;CL:0000839!1.67e-14!70;CL:0000084!1.61e-13!25;CL:0000827!1.61e-13!25;CL:0000625!1.25e-12!11;CL:0000236!9.92e-10!14;CL:0000763!9.79e-09!112;CL:0000049!9.79e-09!112;CL:0000624!6.15e-08!6;CL:0000134!3.96e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.92e-21;33!CL:0002057;4.92e-21;33!CL:0000791;1.28e-19;18!CL:0000789;1.28e-19;18!CL:0002419;1.28e-19;18!CL:0000625;8.97e-15;11!CL:0000473;4.70e-14;39!CL:0000234;4.70e-14;39!CL:0000084;1.07e-13;25!CL:0000542;7.09e-11;53!CL:0002087;7.66e-10;104!CL:0000576;1.24e-09;48!CL:0000898;2.15e-07;3!CL:0000945;4.45e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.66e-26,115;CL:0002031,3.76e-25,120;CL:0000738,1.76e-21,136;CL:0000791,2.76e-19,18;CL:0000789,2.76e-19,18;CL:0002420,2.76e-19,18;CL:0002419,2.76e-19,18;CL:0000790,2.76e-19,18;CL:0000838,1.81e-17,52;CL:0002032,3.38e-17,161;CL:0000837,3.38e-17,161;CL:0000542,4.46e-17,53;CL:0000051,4.46e-17,53;CL:0000860,6.86e-17,42;CL:0002057,6.86e-17,42;CL:0000037,3.16e-16,168;CL:0000988,4.32e-15,177;CL:0000625,1.72e-14,11;CL:0000473,1.98e-14,48;CL:0000234,1.98e-14,48;CL:0000084,1.83e-13,25;CL:0000827,1.83e-13,25;CL:0002194,5.37e-11,59;CL:0000576,5.37e-11,59;CL:0000040,5.37e-11,59;CL:0000559,5.37e-11,59;CL:0002009,1.49e-10,61;CL:0000893,2.14e-10,2;CL:0002489,2.14e-10,2;CL:0000809,2.14e-10,2;CL:0000808,2.14e-10,2;CL:0000894,2.14e-10,2;CL:0000806,2.14e-10,2;CL:0000807,2.14e-10,2;CL:0000805,2.14e-10,2;CL:0002425,2.14e-10,2;CL:0000839,1.45e-09,66;CL:0000557,2.19e-09,67;CL:0000236,6.71e-09,14;CL:0000766,1.46e-08,72;CL:0000898,1.87e-07,3;CL:0000945,4.27e-07,24;CL:0000826,4.27e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-19;18!CL:0002057;8.59e-14;42!CL:0000051;7.09e-11;53!CL:0002425;1.11e-10;2!UBERON:0004872;9.68e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.28e-19!102;UBERON:0003061!3.28e-19!102;UBERON:0002193!1.38e-17!112;UBERON:0002405!7.81e-13!115;UBERON:0002371!1.14e-12!80;UBERON:0001474!3.28e-11!86;UBERON:0004177!5.99e-10!7;UBERON:0004765!2.25e-08!101;UBERON:0001434!2.25e-08!101;UBERON:0002370!3.72e-08!4;UBERON:0005058!3.72e-08!4;UBERON:0009113!3.72e-08!4;UBERON:0003295!3.72e-08!4;UBERON:0005562!3.72e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.23e-12,93;UBERON:0002390,8.36e-12,98;UBERON:0003061,8.36e-12,98;UBERON:0002193,1.01e-11,108;UBERON:0004177,2.65e-11,7;UBERON:0005057,2.65e-11,7;UBERON:0002371,5.56e-08,76;UBERON:0002106,1.26e-07,3;UBERON:0004854,1.26e-07,3;UBERON:0009034,1.26e-07,3;UBERON:0002095,1.26e-07,3;UBERON:0004782,1.26e-07,3;UBERON:0003281,1.26e-07,3;UBERON:0009664,1.26e-07,3;UBERON:0002296,1.26e-07,3;UBERON:0005602,1.26e-07,3;UBERON:0001179,1.26e-07,3;UBERON:0006293,1.26e-07,3;UBERON:0001474,3.23e-07,82 | |||
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|short_description=p5@LY9 | |short_description=p5@LY9 | ||
}} | }} |
Latest revision as of 03:37, 18 September 2015
Short description: | p5@LY9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LY9_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000474998_5end |
EntrezGene: | LY9 |
HGNC: | 6730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 1.23e-12 | 93 |
hematopoietic system | 8.36e-12 | 98 |
blood island | 8.36e-12 | 98 |
hemolymphoid system | 1.01e-11 | 108 |
hemopoietic organ | 2.65e-11 | 7 |
immune organ | 2.65e-11 | 7 |
bone marrow | 5.56e-08 | 76 |
spleen | 1.26e-07 | 3 |
gastrointestinal system mesentery | 1.26e-07 | 3 |
stomach region | 1.26e-07 | 3 |
mesentery | 1.26e-07 | 3 |
gastrointestinal system serosa | 1.26e-07 | 3 |
mesentery of stomach | 1.26e-07 | 3 |
gut mesentery | 1.26e-07 | 3 |
dorsal mesentery | 1.26e-07 | 3 |
dorsal mesogastrium | 1.26e-07 | 3 |
peritoneal cavity | 1.26e-07 | 3 |
spleen primordium | 1.26e-07 | 3 |
bone element | 3.23e-07 | 82 |