FFCP PHASE1:Hg19::chr19:4559599..4559619,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4559599..4559619,- to FFCP PHASE1:Hg19::chr19:4559599..4559619,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10501 | |EntrezGene=10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10739 | |HGNC=10739 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3T3 | |UniProt=Q9H3T3 | ||
|association_with_transcript=151bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |||
|cluster_id=chr19:4559599..4559619,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_4_at_SEMA6B_5end | |||
|id=chr19:4559599..4559619,- | |||
|ontology_enrichment_celltype=CL:0002139!4.94e-30!24;CL:0002057!5.48e-30!42;CL:0000115!1.48e-28!35;CL:0000860!3.55e-27!45;CL:0000071!3.48e-22!18;CL:0002546!3.48e-22!18;CL:0002078!1.46e-20!44;CL:0002194!8.99e-17!63;CL:0000576!8.99e-17!63;CL:0000040!8.99e-17!63;CL:0000559!8.99e-17!63;CL:0000766!4.93e-16!76;CL:0002009!6.36e-16!65;CL:0000839!5.04e-14!70;CL:0000557!1.12e-13!71;CL:0000213!1.25e-13!57;CL:0000215!1.25e-13!57;CL:1000413!3.07e-12!9;CL:0005020!2.08e-09!6;CL:0002138!2.08e-09!6;CL:0005022!2.08e-09!6;CL:0002544!1.21e-08!6;CL:0002543!5.42e-08!6;CL:0000763!6.66e-08!112;CL:0000049!6.66e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.88e-55;33!CL:0002057;2.88e-55;33!CL:0002139;2.29e-48;24!CL:0000115;8.11e-42;36!CL:0000473;1.69e-37;39!CL:0000234;1.69e-37;39!CL:0000071;1.88e-35;18!CL:0000576;1.24e-24;48!CL:0002078;1.98e-24;45!CL:1000413;4.52e-19;9!CL:0000213;4.77e-17;58!CL:0000215;4.77e-17;58!CL:0000766;1.70e-15;69!CL:0002138;2.14e-14;6!CL:0002544;3.46e-13;6!CL:0002543;4.13e-12;6!CL:0002188;6.40e-08;5!CL:0002144;1.52e-07;3!CL:0000763;1.68e-07;100!CL:0002618;7.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.36e-49,36;CL:0002139,2.41e-48,24;CL:0000860,1.57e-45,42;CL:0002057,1.57e-45,42;CL:0000473,1.22e-38,48;CL:0000234,1.22e-38,48;CL:0002078,7.83e-38,45;CL:0000071,2.06e-35,18;CL:0002546,2.06e-35,18;CL:0002194,5.00e-29,59;CL:0000576,5.00e-29,59;CL:0000040,5.00e-29,59;CL:0000559,5.00e-29,59;CL:0002009,8.62e-28,61;CL:0000213,2.45e-27,58;CL:0000215,2.45e-27,58;CL:0000766,3.89e-27,72;CL:0000839,4.99e-25,66;CL:0000557,1.59e-24,67;CL:1000413,4.68e-19,9;CL:0000763,5.39e-15,108;CL:0000049,5.39e-15,108;CL:0005020,2.04e-14,6;CL:0002138,2.04e-14,6;CL:0005022,2.04e-14,6;CL:0002544,3.62e-13,6;CL:0002543,4.22e-12,6;CL:0002087,8.16e-11,115;CL:0000738,4.12e-10,136;CL:0002031,4.87e-10,120;CL:0000222,7.30e-09,121;CL:0002188,5.86e-08,5;CL:0002144,1.57e-07,3;CL:0002032,2.77e-07,161;CL:0000837,2.77e-07,161;CL:0002618,6.99e-07,3;CL:0000076,8.22e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.88e-35;18!CL:0002057;2.37e-34;42!CL:0005022;2.14e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-24!115;UBERON:0001986!3.48e-22!18;UBERON:0004638!3.48e-22!18;UBERON:0004852!3.48e-22!18;UBERON:0002405!4.35e-18!115;UBERON:0000487!4.95e-17!22;UBERON:0003081!9.95e-16!216;UBERON:0002193!8.11e-15!112;UBERON:0006914!2.83e-14!25;UBERON:0003915!3.07e-12!9;UBERON:0004700!3.07e-12!9;UBERON:0001917!3.07e-12!9;UBERON:0002371!5.43e-11!80;UBERON:0002390!3.18e-10!102;UBERON:0003061!3.18e-10!102;UBERON:0000055!4.19e-10!69;UBERON:0001474!1.52e-09!86;UBERON:0004111!2.48e-09!241;UBERON:0001009!8.64e-09!113;UBERON:0000467!1.59e-08!625;UBERON:0000025!1.85e-08!194;UBERON:0000480!1.87e-08!626;UBERON:0002465!2.03e-08!10;UBERON:0002049!2.06e-08!79;UBERON:0007798!2.06e-08!79;UBERON:0000477!3.13e-08!286;UBERON:0004872!5.48e-08!84;UBERON:0004535!1.62e-07!110;UBERON:0000468!1.71e-07!659;UBERON:0001981!7.25e-07!60;UBERON:0007500!7.25e-07!60;UBERON:0004537!7.25e-07!60;UBERON:0006965!7.25e-07!60;UBERON:0003914!8.52e-07!118;UBERON:0004765!8.89e-07!101;UBERON:0001434!8.89e-07!101;UBERON:0001473!9.77e-07!8;UBERON:0004536!9.77e-07!8;UBERON:0006558!9.77e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.88e-35;18!UBERON:0001986;1.88e-35;18!UBERON:0004852;1.88e-35;18!UBERON:0000487;4.47e-28;22!UBERON:0006914;4.22e-24;25!UBERON:0003915;4.52e-19;9!UBERON:0004700;4.52e-19;9!UBERON:0001917;4.52e-19;9!UBERON:0000490;7.97e-16;33!UBERON:0002465;8.14e-11;10!UBERON:0001473;1.42e-10;8!UBERON:0004536;1.42e-10;8!UBERON:0006558;1.42e-10;8!UBERON:0000055;5.83e-10;65!UBERON:0001638;7.65e-08;9!UBERON:0003920;7.65e-08;9!UBERON:0004582;7.65e-08;9!UBERON:0010523;1.52e-07;3!UBERON:0001915;1.52e-07;3!UBERON:0001982;1.52e-07;3!UBERON:0007500;3.43e-07;56!UBERON:0001981;3.43e-07;56!UBERON:0004537;3.43e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.06e-35,18;UBERON:0001986,2.06e-35,18;UBERON:0004852,2.06e-35,18;UBERON:0002405,5.71e-29,93;UBERON:0000487,4.82e-28,22;UBERON:0006914,4.51e-24,25;UBERON:0003081,5.42e-24,203;UBERON:0002193,2.19e-23,108;UBERON:0002371,1.34e-20,76;UBERON:0003915,4.68e-19,9;UBERON:0004700,4.68e-19,9;UBERON:0001917,4.68e-19,9;UBERON:0001474,1.81e-18,82;UBERON:0000055,6.01e-17,68;UBERON:0002390,1.64e-16,98;UBERON:0003061,1.64e-16,98;UBERON:0004765,4.46e-16,90;UBERON:0000926,4.22e-14,315;UBERON:0004120,4.22e-14,315;UBERON:0006603,4.22e-14,315;UBERON:0002049,7.95e-14,78;UBERON:0007798,7.95e-14,78;UBERON:0001434,1.22e-13,100;UBERON:0007500,4.17e-11,59;UBERON:0001981,4.17e-11,59;UBERON:0004537,4.17e-11,59;UBERON:0006965,4.17e-11,59;UBERON:0002465,6.68e-11,10;UBERON:0001473,1.37e-10,8;UBERON:0004536,1.37e-10,8;UBERON:0006558,1.37e-10,8;UBERON:0001009,4.57e-09,112;UBERON:0004872,4.79e-09,83;UBERON:0004535,1.02e-08,109;UBERON:0001638,7.76e-08,9;UBERON:0003920,7.76e-08,9;UBERON:0004582,7.76e-08,9;UBERON:0010523,1.57e-07,3;UBERON:0001915,1.57e-07,3;UBERON:0001982,1.57e-07,3;UBERON:0003914,1.85e-07,117 | |||
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|short_description=p4@SEMA6B | |||
}} | }} |
Latest revision as of 15:52, 18 September 2015
Short description: | p4@SEMA6B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA6B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 151bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
EntrezGene: | SEMA6B |
HGNC: | 10739 |
UniProt: | Q9H3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data