FFCP PHASE1:Hg19::chr21:46929334..46929347,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2195 | |||
|TSSclassifier=strong | |||
|UniProt=P39060 | |||
|association_with_transcript=-129bp_to_AF416592_5end | |||
|cluster_id=chr21:46929334..46929347,+ | |||
|description=CAGE_peak_4_at_COL18A1_5end | |||
|id=chr21:46929334..46929347,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.29e-08!248;CL:1000507!4.79e-08!12;CL:1000494!4.79e-08!12;CL:1000497!9.35e-08!18;CL:0002518!9.35e-08!18;CL:0000220!9.74e-08!246;CL:1000449!1.02e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.12e-18;10!CL:1000494;2.12e-18;10!CL:1000449;1.86e-17;15!CL:0000669;3.12e-17;4!CL:0000650;6.77e-16;2!CL:1000500;6.77e-16;2!CL:1000618;6.77e-16;2!CL:1001318;6.77e-16;2!CL:0002173;6.77e-16;2!CL:1000497;2.38e-15;17!CL:0002518;2.38e-15;17!CL:0002586;6.60e-11;3!CL:1000746;2.71e-10;7!CL:1000612;2.71e-10;7!CL:0002681;3.45e-10;12!CL:0002584;3.45e-10;12!CL:0000313;3.87e-09;1!CL:0000147;1.29e-08;14!CL:0000149;2.14e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.45e-18,10;CL:1000494,1.45e-18,10;CL:1000449,1.37e-17,15;CL:0000669,2.06e-17,4;CL:0000650,6.78e-16,2;CL:1000500,6.78e-16,2;CL:1000618,6.78e-16,2;CL:1001318,6.78e-16,2;CL:0002173,6.78e-16,2;CL:1000497,1.83e-15,17;CL:0002518,1.83e-15,17;CL:0002586,5.98e-11,3;CL:1000746,2.71e-10,7;CL:1000612,2.71e-10,7;CL:0002681,2.95e-10,12;CL:0002584,2.95e-10,12;CL:0000313,4.19e-09,1;CL:0000147,1.58e-08,14;CL:0000149,1.99e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.27e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;3.87e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003064!2.58e-10!37;UBERON:0000119!5.41e-10!312;UBERON:0005172!6.70e-10!55;UBERON:0005173!6.70e-10!55;UBERON:0000483!4.00e-09!309;UBERON:0003914!7.71e-09!118;UBERON:0005256!1.39e-08!143;UBERON:0000481!2.12e-08!347;UBERON:0006554!2.34e-08!44;UBERON:0006555!4.60e-08!17;UBERON:0005103!4.60e-08!17;UBERON:0000083!4.60e-08!17;UBERON:0009201!4.60e-08!17;UBERON:0004819!4.60e-08!17;UBERON:0006553!4.60e-08!17;UBERON:0003074!4.60e-08!17;UBERON:0003060!4.60e-08!17;UBERON:0009773!4.79e-08!12;UBERON:0001231!4.79e-08!12;UBERON:0004810!4.79e-08!12;UBERON:0001008!5.49e-08!45;UBERON:0002417!6.51e-08!61;UBERON:0000916!6.51e-08!61;UBERON:0000475!9.92e-08!365;UBERON:0004211!1.02e-07!16;UBERON:0001285!1.02e-07!16;UBERON:0007684!1.02e-07!16;UBERON:0003220!1.02e-07!16;UBERON:0004208!1.02e-07!16;UBERON:0004876!1.63e-07!20;UBERON:0004111!1.77e-07!241;UBERON:0000080!2.27e-07!18;UBERON:0002120!2.27e-07!18;UBERON:0004875!2.27e-07!18;UBERON:0005721!2.27e-07!18;UBERON:0005754!2.27e-07!18;UBERON:0007297!2.27e-07!18;UBERON:0003887!2.39e-07!21;UBERON:0000477!4.37e-07!286;UBERON:0002113!6.41e-07!27;UBERON:0003918!6.41e-07!27;UBERON:0005095!6.41e-07!27;UBERON:0007687!6.41e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.12e-18;10!UBERON:0009773;2.12e-18;10!UBERON:0001231;2.12e-18;10!UBERON:0004810;2.12e-18;10!UBERON:0006555;1.86e-17;15!UBERON:0004819;1.86e-17;15!UBERON:0001285;1.86e-17;15!UBERON:0007684;1.86e-17;15!UBERON:0003567;6.77e-16;2!UBERON:0003838;6.77e-16;2!UBERON:0003586;6.77e-16;2!UBERON:0005169;6.77e-16;2!UBERON:0002321;6.77e-16;2!UBERON:0005215;6.77e-16;2!UBERON:0002303;6.77e-16;2!UBERON:0002319;6.77e-16;2!UBERON:0000353;1.84e-12;15!UBERON:0001781;6.60e-11;3!UBERON:0001782;6.60e-11;3!UBERON:0002113;9.91e-11;24!UBERON:0011143;9.91e-11;24!UBERON:0000074;2.71e-10;7!UBERON:0001229;2.71e-10;7!UBERON:0001225;3.45e-10;12!UBERON:0008987;3.45e-10;12!UBERON:0005172;8.88e-10;52!UBERON:0005173;8.88e-10;52!UBERON:0004911;3.87e-09;1!UBERON:0000489;8.59e-09;29!UBERON:0002079;1.27e-08;1!UBERON:0006554;1.76e-08;30!UBERON:0001008;1.76e-08;30!UBERON:0003891;2.14e-08;4!UBERON:0001851;3.55e-08;15!UBERON:0000966;7.05e-07;5!UBERON:0005388;7.05e-07;5!UBERON:0001802;7.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.45e-18,10;UBERON:0004211,1.37e-17,15;UBERON:0009773,1.37e-17,15;UBERON:0001231,1.37e-17,15;UBERON:0001285,1.37e-17,15;UBERON:0007684,1.37e-17,15;UBERON:0004208,1.37e-17,15;UBERON:0006555,1.84e-16,16;UBERON:0004819,1.84e-16,16;UBERON:0003567,6.78e-16,2;UBERON:0003838,6.78e-16,2;UBERON:0003586,6.78e-16,2;UBERON:0005169,6.78e-16,2;UBERON:0002321,6.78e-16,2;UBERON:0005215,6.78e-16,2;UBERON:0002303,6.78e-16,2;UBERON:0002319,6.78e-16,2;UBERON:0000353,1.57e-12,15;UBERON:0005172,2.76e-12,54;UBERON:0005173,2.76e-12,54;UBERON:0003914,1.10e-11,117;UBERON:0001782,5.98e-11,3;UBERON:0005424,5.98e-11,3;UBERON:0002417,6.83e-11,60;UBERON:0000916,6.83e-11,60;UBERON:0010532,2.71e-10,7;UBERON:0000074,2.71e-10,7;UBERON:0001229,2.71e-10,7;UBERON:0001230,2.71e-10,7;UBERON:0003220,2.71e-10,7;UBERON:0005749,2.71e-10,7;UBERON:0004199,2.71e-10,7;UBERON:0004209,2.71e-10,7;UBERON:0004198,2.71e-10,7;UBERON:0001225,2.95e-10,12;UBERON:0008987,2.95e-10,12;UBERON:0002113,6.12e-10,26;UBERON:0003918,6.12e-10,26;UBERON:0011143,6.12e-10,26;UBERON:0005095,6.12e-10,26;UBERON:0007687,6.12e-10,26;UBERON:0004911,4.19e-09,1;UBERON:0005103,4.57e-09,8;UBERON:0000083,4.57e-09,8;UBERON:0009201,4.57e-09,8;UBERON:0006553,4.57e-09,8;UBERON:0003074,4.57e-09,8;UBERON:0003060,4.57e-09,8;UBERON:0002079,9.74e-09,1;UBERON:0001781,1.99e-08,4;UBERON:0003891,2.15e-08,4;UBERON:0000489,2.98e-08,31;UBERON:0001851,3.14e-08,15;UBERON:0000080,4.13e-08,9;UBERON:0002120,4.13e-08,9;UBERON:0004875,4.13e-08,9;UBERON:0005721,4.13e-08,9;UBERON:0005754,4.13e-08,9;UBERON:0007297,4.13e-08,9;UBERON:0003103,1.43e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.612002073732759,0.940364164434263,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,0.12786256184353,0,0,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.550236083880135,0,1.03366703667732,0,0,0.402829317109147,0,4.14905497831888,0.735326160691737,3.24056779152704,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0,0,0,2.4666754841716,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0,0,0.61417158655884,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.427114777637135,0,0.600182192168805,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.503760491138201,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.207322110030741,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,5.60967095213783,0,1.47008711385542,2.53510069643662,0.982827216677626,0.590789906681404,0,0.245976877086227,0.857839051492628,0.219500570817251,0,0.301586917234893,0.555530670951178,0,0,0,1.27523445472584,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.253991577168676,0,0,0,1.13110241973656,0,0.571652865261156,0.112131084345361,0.87192013766656,0.5867062865676,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.710783897485092,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0.604297247958111,0.200506470303285,0.184161977871793,0.459257792658427,0.182091168006717,0.655622074797121,0.451199612907412,0.539107359730903,2.35304930753057,1.46139224653261,0.633309773357254,0,0.510281115829547,0.215915916102139,3.08454505380579,1.35473218771926,2.00675909541941,0,1.66215201785745,0.671624264166535,0.219259876645935,0,0,2.62411716559765,1.30151357865721,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,1.24644849905432,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0.577901179803038,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0.157566364614447,0.164831716762333,0.202210631562555,0,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0,0,0.630445658393585,0.629455057619977,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0.58620893471233,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0.429642228169954,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0.782982875895635,0,0,0,0.179088841081487,0,0.438568099157414,0,0.578742114812744,0,1.28120759293973,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0.0981477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| |||
|short_description=p4@COL18A1 | |||
}} |
Latest revision as of 21:01, 18 September 2015
Short description: | p4@COL18A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL18A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_AF416592_5end |
EntrezGene: | COL18A1 |
HGNC: | 2195 |
UniProt: | P39060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.45e-18 | 10 |
nephron tubule epithelial cell | 1.45e-18 | 10 |
epithelial cell of nephron | 1.37e-17 | 15 |
pericyte cell | 2.06e-17 | 4 |
mesangial cell | 6.78e-16 | 2 |
kidney interstitial cell | 6.78e-16 | 2 |
juxtaglomerular complex cell | 6.78e-16 | 2 |
renal interstitial pericyte | 6.78e-16 | 2 |
extraglomerular mesangial cell | 6.78e-16 | 2 |
kidney cell | 1.83e-15 | 17 |
kidney epithelial cell | 1.83e-15 | 17 |
retinal pigment epithelial cell | 5.98e-11 | 3 |
glomerular cell | 2.71e-10 | 7 |
kidney corpuscule cell | 2.71e-10 | 7 |
kidney cortical cell | 2.95e-10 | 12 |
renal cortical epithelial cell | 2.95e-10 | 12 |
serous secreting cell | 4.19e-09 | 1 |
pigment cell | 1.58e-08 | 14 |
visual pigment cell | 1.99e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.19e-09 | 1 |