FFCP PHASE1:Hg19::chr6:46703447..46703465,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:46703447..46703465,- to FFCP PHASE1:Hg19::chr6:46703447..46703465,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7941 | |EntrezGene=7941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9040 | |HGNC=9040 | ||
|TSSclassifier=strong | |||
|UniProt=Q13093 | |UniProt=Q13093 | ||
|association_with_transcript=-17bp_to_ENST00000537365,NM_001168357_5end | |||
|cluster_id=chr6:46703447..46703465,- | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_3_at_PLA2G7_5end | |||
|id=chr6:46703447..46703465,- | |||
|ontology_enrichment_celltype=CL:0002194!1.24e-47!63;CL:0000576!1.24e-47!63;CL:0000040!1.24e-47!63;CL:0000559!1.24e-47!63;CL:0002009!1.13e-45!65;CL:0000839!2.85e-41!70;CL:0000557!1.82e-40!71;CL:0002057!3.07e-40!42;CL:0000766!9.30e-37!76;CL:0000860!1.02e-36!45;CL:0002087!7.59e-22!119;CL:0000763!3.76e-21!112;CL:0000049!3.76e-21!112;CL:0002031!2.07e-18!124;CL:0000738!3.60e-17!140;CL:0000037!3.32e-11!172;CL:0000566!3.32e-11!172;CL:0002032!5.34e-11!165;CL:0000837!5.34e-11!165;CL:0000988!6.17e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.88e-45;39!CL:0000234;6.88e-45;39!CL:0000860;8.37e-33;33!CL:0002057;8.37e-33;33!CL:0000235;2.36e-32;6!CL:0000576;4.52e-21;48!CL:0000766;2.42e-20;69!CL:0002619;2.36e-16;3!CL:0000763;1.82e-09;100!CL:0000840;7.26e-09;5!CL:0000738;8.89e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.87e-62,59;CL:0000576,5.87e-62,59;CL:0000040,5.87e-62,59;CL:0000559,5.87e-62,59;CL:0002009,9.10e-60,61;CL:0000839,7.30e-55,66;CL:0000557,5.72e-54,67;CL:0000766,7.28e-50,72;CL:0000473,6.05e-47,48;CL:0000234,6.05e-47,48;CL:0000235,2.20e-32,6;CL:0000763,2.04e-31,108;CL:0000049,2.04e-31,108;CL:0002087,3.71e-29,115;CL:0002031,1.05e-27,120;CL:0000860,3.83e-27,42;CL:0002057,3.83e-27,42;CL:0000738,9.16e-24,136;CL:0002032,3.63e-19,161;CL:0000837,3.63e-19,161;CL:0000037,4.01e-18,168;CL:0000988,6.66e-17,177;CL:0002619,1.52e-16,3;CL:0000840,7.97e-09,5;CL:0001029,7.97e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-21;42!UBERON:0010122;2.53e-11;2!CL:0000049;8.13e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.95e-34!80;UBERON:0002390!5.03e-31!102;UBERON:0003061!5.03e-31!102;UBERON:0001474!1.18e-30!86;UBERON:0002193!5.03e-28!112;UBERON:0004765!9.85e-28!101;UBERON:0001434!9.85e-28!101;UBERON:0001049!6.59e-25!57;UBERON:0005068!6.59e-25!57;UBERON:0006241!6.59e-25!57;UBERON:0007135!6.59e-25!57;UBERON:0002405!1.47e-24!115;UBERON:0002616!2.85e-22!59;UBERON:0001869!4.20e-22!32;UBERON:0002020!5.24e-22!34;UBERON:0003528!5.24e-22!34;UBERON:0007023!8.29e-21!115;UBERON:0001893!2.18e-20!34;UBERON:0002780!2.39e-20!41;UBERON:0001890!2.39e-20!41;UBERON:0006240!2.39e-20!41;UBERON:0002619!3.33e-20!22;UBERON:0000955!1.10e-19!69;UBERON:0006238!1.10e-19!69;UBERON:0003080!1.14e-19!42;UBERON:0002791!4.10e-19!33;UBERON:0001950!6.99e-18!20;UBERON:0000956!3.50e-17!25;UBERON:0000203!3.50e-17!25;UBERON:0001017!8.21e-17!82;UBERON:0000062!3.53e-16!511;UBERON:0005743!1.61e-15!86;UBERON:0000073!6.04e-14!94;UBERON:0001016!6.04e-14!94;UBERON:0003075!9.48e-14!86;UBERON:0007284!9.48e-14!86;UBERON:0002346!1.11e-12!90;UBERON:0003056!4.02e-11!61;UBERON:0002204!8.17e-11!167;UBERON:0003081!4.13e-10!216;UBERON:0000467!8.45e-10!625;UBERON:0000480!9.86e-10!626;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000200!2.22e-09!6;UBERON:0000033!3.29e-09!123;UBERON:0000923!3.53e-09!604;UBERON:0005291!3.53e-09!604;UBERON:0006598!3.53e-09!604;UBERON:0002532!3.53e-09!604;UBERON:0001871!3.85e-09!7;UBERON:0002050!4.11e-09!605;UBERON:0005423!4.11e-09!605;UBERON:0000922!1.17e-08!612;UBERON:0000468!1.30e-08!659;UBERON:0000349!1.87e-08!5;UBERON:0000369!8.41e-08!4;UBERON:0002435!8.41e-08!4;UBERON:0000204!8.41e-08!4;UBERON:0010082!8.41e-08!4;UBERON:0004733!6.46e-07!12;UBERON:0002028!6.46e-07!12;UBERON:0007277!6.46e-07!12;UBERON:0002420!8.04e-07!9;UBERON:0007245!8.04e-07!9;UBERON:0010009!8.04e-07!9;UBERON:0010011!8.04e-07!9;UBERON:0000454!8.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;4.26e-21;4!UBERON:0002435;4.26e-21;4!UBERON:0000204;4.26e-21;4!UBERON:0005383;1.82e-16;3!UBERON:0005382;1.82e-16;3!UBERON:0002420;1.75e-14;9!UBERON:0007245;1.75e-14;9!UBERON:0010009;1.75e-14;9!UBERON:0010011;1.75e-14;9!UBERON:0000454;1.75e-14;9!UBERON:0001869;9.82e-13;32!UBERON:0001893;2.55e-12;34!UBERON:0009663;4.00e-12;7!UBERON:0002791;1.06e-11;32!UBERON:0001873;2.53e-11;2!UBERON:0003528;9.88e-11;34!UBERON:0002020;9.88e-11;34!UBERON:0000125;1.88e-09;9!UBERON:0002308;1.88e-09;9!UBERON:0002780;5.01e-08;41!UBERON:0001890;5.01e-08;41!UBERON:0001870;6.88e-08;3!UBERON:0001874;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.79e-47,76;UBERON:0001474,3.89e-43,82;UBERON:0004765,8.10e-39,90;UBERON:0002405,2.18e-37,93;UBERON:0002390,3.39e-35,98;UBERON:0003061,3.39e-35,98;UBERON:0001434,2.22e-34,100;UBERON:0002193,2.04e-31,108;UBERON:0000369,3.48e-21,4;UBERON:0002435,3.48e-21,4;UBERON:0000204,3.48e-21,4;UBERON:0010082,3.48e-21,4;UBERON:0002204,2.88e-18,167;UBERON:0005383,1.11e-16,3;UBERON:0005382,1.11e-16,3;UBERON:0002420,1.50e-14,9;UBERON:0007245,1.50e-14,9;UBERON:0010009,1.50e-14,9;UBERON:0010011,1.50e-14,9;UBERON:0000454,1.50e-14,9;UBERON:0003081,5.55e-14,203;UBERON:0001869,7.86e-14,32;UBERON:0001893,6.17e-13,34;UBERON:0009663,3.57e-12,7;UBERON:0001873,1.58e-11,2;UBERON:0010122,1.58e-11,2;UBERON:0002791,3.40e-11,32;UBERON:0002780,1.77e-10,41;UBERON:0001890,1.77e-10,41;UBERON:0003080,1.77e-10,41;UBERON:0006240,1.77e-10,41;UBERON:0003528,1.81e-10,34;UBERON:0002020,1.81e-10,34;UBERON:0000125,1.72e-09,9;UBERON:0002308,1.72e-09,9;UBERON:0000073,1.99e-09,53;UBERON:0002616,1.99e-09,53;UBERON:0001049,7.99e-09,56;UBERON:0005068,7.99e-09,56;UBERON:0006241,7.99e-09,56;UBERON:0007135,7.99e-09,56;UBERON:0001870,5.80e-08,3;UBERON:0000926,6.33e-07,315;UBERON:0004120,6.33e-07,315;UBERON:0006603,6.33e-07,315;UBERON:0000923,6.77e-07,560;UBERON:0010316,6.77e-07,560;UBERON:0005291,6.77e-07,560;UBERON:0006598,6.77e-07,560;UBERON:0010317,6.77e-07,560;UBERON:0002532,6.77e-07,560;UBERON:0001874,7.35e-07,1;UBERON:0000955,8.22e-07,68;UBERON:0006238,8.22e-07,68;UBERON:0002050,8.56e-07,564 | |||
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| ||
|short_description=p3@PLA2G7 | |||
}} | }} |
Latest revision as of 03:17, 19 September 2015
Short description: | p3@PLA2G7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLA2G7_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | -17bp_to_ENST00000537365, NM_001168357_5end |
EntrezGene: | PLA2G7 |
HGNC: | 9040 |
UniProt: | Q13093 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.87e-62 | 59 |
monocyte | 5.87e-62 | 59 |
monoblast | 5.87e-62 | 59 |
promonocyte | 5.87e-62 | 59 |
macrophage dendritic cell progenitor | 9.10e-60 | 61 |
myeloid lineage restricted progenitor cell | 7.30e-55 | 66 |
granulocyte monocyte progenitor cell | 5.72e-54 | 67 |
myeloid leukocyte | 7.28e-50 | 72 |
defensive cell | 6.05e-47 | 48 |
phagocyte | 6.05e-47 | 48 |
macrophage | 2.20e-32 | 6 |
myeloid cell | 2.04e-31 | 108 |
common myeloid progenitor | 2.04e-31 | 108 |
nongranular leukocyte | 3.71e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-27 | 120 |
classical monocyte | 3.83e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-27 | 42 |
leukocyte | 9.16e-24 | 136 |
hematopoietic oligopotent progenitor cell | 3.63e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-19 | 161 |
hematopoietic stem cell | 4.01e-18 | 168 |
hematopoietic cell | 6.66e-17 | 177 |
adult endothelial progenitor cell | 1.52e-16 | 3 |
immature conventional dendritic cell | 7.97e-09 | 5 |
common dendritic progenitor | 7.97e-09 | 5 |