FFCP PHASE1:Hg19::chr19:51472185..51472197,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5653 | |EntrezGene=5653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |HGNC=6367 | ||
|TSSclassifier=strong | |||
|UniProt=Q92876 | |UniProt=Q92876 | ||
|association_with_transcript=-138bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |association_with_transcript=-138bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | ||
|cluster_id=chr19:51472185..51472197,- | |||
|coexpression_cluster_id=C849 | |coexpression_cluster_id=C849 | ||
|description=CAGE_peak_11_at_KLK6_5end | |description=CAGE_peak_11_at_KLK6_5end | ||
|id=chr19:51472185..51472197,- | |id=chr19:51472185..51472197,- | ||
|ontology_enrichment_celltype=CL:1000507!8.54e-16!12;CL:1000494!8.54e-16!12;CL:0000039!2.86e-13!7;CL:0000586!2.86e-13!7;CL:0000239!2.97e-13!3;CL:1000615!2.97e-13!3;CL:0002306!2.97e-13!3;CL:1000449!1.38e-11!16;CL:1000497!3.49e-10!18;CL:0002518!3.49e-10!18;CL:0000066!3.68e-10!254;CL:0002681!9.43e-08!13;CL:0002584!9.43e-08!13 | |ontology_enrichment_celltype=CL:1000507!8.54e-16!12;CL:1000494!8.54e-16!12;CL:0000039!2.86e-13!7;CL:0000586!2.86e-13!7;CL:0000239!2.97e-13!3;CL:1000615!2.97e-13!3;CL:0002306!2.97e-13!3;CL:1000449!1.38e-11!16;CL:1000497!3.49e-10!18;CL:0002518!3.49e-10!18;CL:0000066!3.68e-10!254;CL:0002681!9.43e-08!13;CL:0002584!9.43e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.95e-21;10!CL:1000494;1.95e-21;10!CL:0000239;1.36e-18;3!CL:1000615;1.36e-18;3!CL:0002306;1.36e-18;3!CL:1000449;2.09e-14;15!CL:1000497;9.55e-13;17!CL:0002518;9.55e-13;17!CL:0002681;1.34e-10;12!CL:0002584;1.34e-10;12!CL:1000415;5.02e-08;2!CL:0000082;6.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.67e-21,10;CL:1000494,1.67e-21,10;CL:0000239,1.24e-18,3;CL:1000615,1.24e-18,3;CL:0002306,1.24e-18,3;CL:1000449,1.88e-14,15;CL:1000497,8.71e-13,17;CL:0002518,8.71e-13,17;CL:0002681,1.29e-10,12;CL:0002584,1.29e-10,12;CL:0000066,9.86e-09,253;CL:1000415,5.02e-08,2;CL:0000082,6.50e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.04e-08;2!UBERON:0010056;8.04e-08;2 | |||
|ontology_enrichment_disease=DOID:305!1.01e-15!106;DOID:299!1.88e-14!25;DOID:0050687!2.31e-12!143;DOID:4074!2.13e-09!2;DOID:4905!2.13e-09!2;DOID:3498!2.13e-09!2;DOID:3493!8.03e-09!2 | |ontology_enrichment_disease=DOID:305!1.01e-15!106;DOID:299!1.88e-14!25;DOID:0050687!2.31e-12!143;DOID:4074!2.13e-09!2;DOID:4905!2.13e-09!2;DOID:3498!2.13e-09!2;DOID:3493!8.03e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3111;6.22e-15;1!DOID:3603;6.22e-15;1!DOID:299;6.85e-09;25!DOID:1324;1.33e-08;15!DOID:1325;1.71e-08;7!DOID:3904;1.71e-08;7!DOID:4929;3.56e-08;2!DOID:0050615;4.27e-08;16!DOID:4074;5.02e-08;2!DOID:4905;5.02e-08;2!DOID:3498;5.02e-08;2!DOID:3910;8.04e-08;2!DOID:3493;8.04e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,6.22e-15,1;DOID:3603,6.22e-15,1;DOID:305,3.19e-09,106;DOID:299,7.00e-09,25;DOID:1324,1.27e-08,15;DOID:1325,1.59e-08,7;DOID:3904,1.59e-08,7;DOID:4929,3.56e-08,2;DOID:0050615,4.07e-08,16;DOID:4074,5.37e-08,2;DOID:4905,5.37e-08,2;DOID:3498,5.37e-08,2;DOID:3910,7.52e-08,2;DOID:3493,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!8.54e-16!12;UBERON:0001231!8.54e-16!12;UBERON:0004810!8.54e-16!12;UBERON:0000464!2.74e-13!104;UBERON:0006853!2.97e-13!3;UBERON:0007685!2.97e-13!3;UBERON:0004134!2.97e-13!3;UBERON:0002553!1.56e-12!70;UBERON:0000466!1.95e-12!126;UBERON:0002298!5.89e-12!8;UBERON:0004211!1.38e-11!16;UBERON:0001285!1.38e-11!16;UBERON:0007684!1.38e-11!16;UBERON:0003220!1.38e-11!16;UBERON:0004208!1.38e-11!16;UBERON:0000058!3.31e-11!26;UBERON:0003886!6.33e-11!63;UBERON:0006555!7.63e-11!17;UBERON:0005103!7.63e-11!17;UBERON:0000083!7.63e-11!17;UBERON:0009201!7.63e-11!17;UBERON:0004819!7.63e-11!17;UBERON:0006553!7.63e-11!17;UBERON:0003074!7.63e-11!17;UBERON:0003060!7.63e-11!17;UBERON:0000080!3.49e-10!18;UBERON:0002120!3.49e-10!18;UBERON:0004875!3.49e-10!18;UBERON:0005721!3.49e-10!18;UBERON:0005754!3.49e-10!18;UBERON:0007297!3.49e-10!18;UBERON:0004876!4.61e-09!20;UBERON:0003887!1.39e-08!21;UBERON:0000489!1.59e-08!32;UBERON:0002113!3.20e-08!27;UBERON:0003918!3.20e-08!27;UBERON:0005095!3.20e-08!27;UBERON:0007687!3.20e-08!27;UBERON:0005177!7.63e-08!107;UBERON:0001225!9.43e-08!13;UBERON:0008987!9.43e-08!13 | |ontology_enrichment_uberon=UBERON:0009773!8.54e-16!12;UBERON:0001231!8.54e-16!12;UBERON:0004810!8.54e-16!12;UBERON:0000464!2.74e-13!104;UBERON:0006853!2.97e-13!3;UBERON:0007685!2.97e-13!3;UBERON:0004134!2.97e-13!3;UBERON:0002553!1.56e-12!70;UBERON:0000466!1.95e-12!126;UBERON:0002298!5.89e-12!8;UBERON:0004211!1.38e-11!16;UBERON:0001285!1.38e-11!16;UBERON:0007684!1.38e-11!16;UBERON:0003220!1.38e-11!16;UBERON:0004208!1.38e-11!16;UBERON:0000058!3.31e-11!26;UBERON:0003886!6.33e-11!63;UBERON:0006555!7.63e-11!17;UBERON:0005103!7.63e-11!17;UBERON:0000083!7.63e-11!17;UBERON:0009201!7.63e-11!17;UBERON:0004819!7.63e-11!17;UBERON:0006553!7.63e-11!17;UBERON:0003074!7.63e-11!17;UBERON:0003060!7.63e-11!17;UBERON:0000080!3.49e-10!18;UBERON:0002120!3.49e-10!18;UBERON:0004875!3.49e-10!18;UBERON:0005721!3.49e-10!18;UBERON:0005754!3.49e-10!18;UBERON:0007297!3.49e-10!18;UBERON:0004876!4.61e-09!20;UBERON:0003887!1.39e-08!21;UBERON:0000489!1.59e-08!32;UBERON:0002113!3.20e-08!27;UBERON:0003918!3.20e-08!27;UBERON:0005095!3.20e-08!27;UBERON:0007687!3.20e-08!27;UBERON:0005177!7.63e-08!107;UBERON:0001225!9.43e-08!13;UBERON:0008987!9.43e-08!13 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.67e-21,10;UBERON:0006853,1.24e-18,3;UBERON:0007685,1.24e-18,3;UBERON:0004134,1.24e-18,3;UBERON:0004913,4.73e-15,1;UBERON:0003703,4.73e-15,1;UBERON:0001174,4.73e-15,1;UBERON:0004914,4.73e-15,1;UBERON:0004211,1.88e-14,15;UBERON:0009773,1.88e-14,15;UBERON:0001231,1.88e-14,15;UBERON:0001285,1.88e-14,15;UBERON:0007684,1.88e-14,15;UBERON:0004208,1.88e-14,15;UBERON:0006555,1.44e-13,16;UBERON:0004819,1.44e-13,16;UBERON:0001225,1.29e-10,12;UBERON:0008987,1.29e-10,12;UBERON:0005177,1.00e-09,101;UBERON:0001851,1.33e-08,15;UBERON:0000353,1.33e-08,15;UBERON:0002113,1.91e-08,26;UBERON:0003918,1.91e-08,26;UBERON:0011143,1.91e-08,26;UBERON:0005095,1.91e-08,26;UBERON:0007687,1.91e-08,26;UBERON:0004903,7.52e-08,2;UBERON:0002173,7.52e-08,2;UBERON:0002186,7.52e-08,2;UBERON:0000489,4.09e-07,31;UBERON:0002294,6.04e-07,9;UBERON:0001173,6.04e-07,9;UBERON:0004912,6.04e-07,9;UBERON:0004802,6.50e-07,19;UBERON:0000115,6.50e-07,19;UBERON:0009569,7.79e-07,112 | |||
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| ||
|short_description=p11@KLK6 | |short_description=p11@KLK6 | ||
}} | }} |
Latest revision as of 13:31, 19 September 2015
Short description: | p11@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KLK6_5end |
Coexpression cluster: | C849_papillotubular_lung_mucinous_oral_Renal_clear_gall |
Association with transcript: | -138bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.67e-21 | 10 |
nephron tubule epithelial cell | 1.67e-21 | 10 |
brush border epithelial cell | 1.24e-18 | 3 |
kidney cortex tubule cell | 1.24e-18 | 3 |
epithelial cell of proximal tubule | 1.24e-18 | 3 |
epithelial cell of nephron | 1.88e-14 | 15 |
kidney cell | 8.71e-13 | 17 |
kidney epithelial cell | 8.71e-13 | 17 |
kidney cortical cell | 1.29e-10 | 12 |
renal cortical epithelial cell | 1.29e-10 | 12 |
epithelial cell | 9.86e-09 | 253 |
epithelial cell of gall bladder | 5.02e-08 | 2 |
epithelial cell of lung | 6.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.67e-21 | 10 |
renal cortex tubule | 1.24e-18 | 3 |
region of nephron tubule | 1.24e-18 | 3 |
proximal tubule | 1.24e-18 | 3 |
hepatopancreatic ampulla | 4.73e-15 | 1 |
extrahepatic bile duct | 4.73e-15 | 1 |
common bile duct | 4.73e-15 | 1 |
duodenal papilla | 4.73e-15 | 1 |
nephron epithelium | 1.88e-14 | 15 |
renal tubule | 1.88e-14 | 15 |
nephron tubule | 1.88e-14 | 15 |
nephron | 1.88e-14 | 15 |
uriniferous tubule | 1.88e-14 | 15 |
nephrogenic mesenchyme | 1.88e-14 | 15 |
excretory tube | 1.44e-13 | 16 |
kidney epithelium | 1.44e-13 | 16 |
cortex of kidney | 1.29e-10 | 12 |
renal parenchyma | 1.29e-10 | 12 |
trunk region element | 1.00e-09 | 101 |
cortex | 1.33e-08 | 15 |
parenchyma | 1.33e-08 | 15 |
kidney | 1.91e-08 | 26 |
kidney mesenchyme | 1.91e-08 | 26 |
upper urinary tract | 1.91e-08 | 26 |
kidney rudiment | 1.91e-08 | 26 |
kidney field | 1.91e-08 | 26 |
bronchoalveolar duct junction | 7.52e-08 | 2 |
alveolar duct | 7.52e-08 | 2 |
bronchiole | 7.52e-08 | 2 |
cavitated compound organ | 4.09e-07 | 31 |
biliary system | 6.04e-07 | 9 |
biliary tree | 6.04e-07 | 9 |
biliary bud | 6.04e-07 | 9 |
respiratory tract epithelium | 6.50e-07 | 19 |
lung epithelium | 6.50e-07 | 19 |
subdivision of trunk | 7.79e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 6.22e-15 | 1 |
mucinous cystadenocarcinoma | 6.22e-15 | 1 |
carcinoma | 3.19e-09 | 106 |
adenocarcinoma | 7.00e-09 | 25 |
lung cancer | 1.27e-08 | 15 |
bronchus cancer | 1.59e-08 | 7 |
bronchogenic carcinoma | 1.59e-08 | 7 |
tubular adenocarcinoma | 3.56e-08 | 2 |
respiratory system cancer | 4.07e-08 | 16 |
pancreas adenocarcinoma | 5.37e-08 | 2 |
pancreatic carcinoma | 5.37e-08 | 2 |
pancreatic ductal adenocarcinoma | 5.37e-08 | 2 |
lung adenocarcinoma | 7.52e-08 | 2 |
signet ring cell adenocarcinoma | 8.60e-08 | 2 |