FFCP PHASE1:Hg19::chr3:76360054..76360097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_ENST00000475034_5end | |association_with_transcript=-149bp_to_ENST00000475034_5end | ||
|cluster_id=chr3:76360054..76360097,+ | |||
|coexpression_cluster_id=C4345 | |coexpression_cluster_id=C4345 | ||
|description=CAGE_peak_4_at_ROBO2_5end | |description=CAGE_peak_4_at_ROBO2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.75e-07;2!CL:0000242;1.75e-07;2!CL:0002549;5.45e-07;2 | |ontology_enrichment_celltype_v019=CL:0000123;1.75e-07;2!CL:0000242;1.75e-07;2!CL:0002549;5.45e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.16e-07,2;CL:0002549,9.85e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.99e-16;82!UBERON:0006241;1.82e-10;3!UBERON:0003057;1.82e-10;3!UBERON:0010122;2.22e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;2.99e-16;82!UBERON:0006241;1.82e-10;3!UBERON:0003057;1.82e-10;3!UBERON:0010122;2.22e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.08e-49!57;UBERON:0005068!4.08e-49!57;UBERON:0006241!4.08e-49!57;UBERON:0007135!4.08e-49!57;UBERON:0002616!3.25e-44!59;UBERON:0001017!1.88e-40!82;UBERON:0002780!1.94e-40!41;UBERON:0001890!1.94e-40!41;UBERON:0006240!1.94e-40!41;UBERON:0007023!3.16e-40!115;UBERON:0005743!1.44e-39!86;UBERON:0003080!3.40e-39!42;UBERON:0000955!1.03e-38!69;UBERON:0006238!1.03e-38!69;UBERON:0001869!1.49e-36!32;UBERON:0002020!2.26e-36!34;UBERON:0003528!2.26e-36!34;UBERON:0001893!3.72e-36!34;UBERON:0003075!8.70e-35!86;UBERON:0007284!8.70e-35!86;UBERON:0002791!9.56e-35!33;UBERON:0000073!3.67e-34!94;UBERON:0001016!3.67e-34!94;UBERON:0002346!1.75e-32!90;UBERON:0002619!5.68e-31!22;UBERON:0001950!2.66e-28!20;UBERON:0003056!3.30e-28!61;UBERON:0000956!1.79e-26!25;UBERON:0000203!1.79e-26!25;UBERON:0000033!4.50e-23!123;UBERON:0000153!3.06e-22!129;UBERON:0007811!3.06e-22!129;UBERON:0004121!1.99e-21!169;UBERON:0000924!1.75e-20!173;UBERON:0006601!1.75e-20!173;UBERON:0000475!8.64e-13!365;UBERON:0002420!9.88e-12!9;UBERON:0007245!9.88e-12!9;UBERON:0010009!9.88e-12!9;UBERON:0010011!9.88e-12!9;UBERON:0000454!9.88e-12!9;UBERON:0002308!2.95e-11!9;UBERON:0000125!2.95e-11!9;UBERON:0003076!6.61e-11!15;UBERON:0003057!6.61e-11!15;UBERON:0000200!2.45e-10!6;UBERON:0001871!8.71e-10!7;UBERON:0001872!7.58e-09!5;UBERON:0000349!7.82e-09!5;UBERON:0009663!1.05e-08!7;UBERON:0002021!1.10e-08!5;UBERON:0000025!1.63e-08!194;UBERON:0000119!3.07e-08!312;UBERON:0000483!4.13e-08!309;UBERON:0000369!8.10e-08!4;UBERON:0002435!8.10e-08!4;UBERON:0000204!8.10e-08!4;UBERON:0010082!8.10e-08!4;UBERON:0004733!2.82e-07!12;UBERON:0002028!2.82e-07!12;UBERON:0007277!2.82e-07!12;UBERON:0000064!3.12e-07!219;UBERON:0002298!4.23e-07!8;UBERON:0000477!6.22e-07!286 | |ontology_enrichment_uberon=UBERON:0001049!4.08e-49!57;UBERON:0005068!4.08e-49!57;UBERON:0006241!4.08e-49!57;UBERON:0007135!4.08e-49!57;UBERON:0002616!3.25e-44!59;UBERON:0001017!1.88e-40!82;UBERON:0002780!1.94e-40!41;UBERON:0001890!1.94e-40!41;UBERON:0006240!1.94e-40!41;UBERON:0007023!3.16e-40!115;UBERON:0005743!1.44e-39!86;UBERON:0003080!3.40e-39!42;UBERON:0000955!1.03e-38!69;UBERON:0006238!1.03e-38!69;UBERON:0001869!1.49e-36!32;UBERON:0002020!2.26e-36!34;UBERON:0003528!2.26e-36!34;UBERON:0001893!3.72e-36!34;UBERON:0003075!8.70e-35!86;UBERON:0007284!8.70e-35!86;UBERON:0002791!9.56e-35!33;UBERON:0000073!3.67e-34!94;UBERON:0001016!3.67e-34!94;UBERON:0002346!1.75e-32!90;UBERON:0002619!5.68e-31!22;UBERON:0001950!2.66e-28!20;UBERON:0003056!3.30e-28!61;UBERON:0000956!1.79e-26!25;UBERON:0000203!1.79e-26!25;UBERON:0000033!4.50e-23!123;UBERON:0000153!3.06e-22!129;UBERON:0007811!3.06e-22!129;UBERON:0004121!1.99e-21!169;UBERON:0000924!1.75e-20!173;UBERON:0006601!1.75e-20!173;UBERON:0000475!8.64e-13!365;UBERON:0002420!9.88e-12!9;UBERON:0007245!9.88e-12!9;UBERON:0010009!9.88e-12!9;UBERON:0010011!9.88e-12!9;UBERON:0000454!9.88e-12!9;UBERON:0002308!2.95e-11!9;UBERON:0000125!2.95e-11!9;UBERON:0003076!6.61e-11!15;UBERON:0003057!6.61e-11!15;UBERON:0000200!2.45e-10!6;UBERON:0001871!8.71e-10!7;UBERON:0001872!7.58e-09!5;UBERON:0000349!7.82e-09!5;UBERON:0009663!1.05e-08!7;UBERON:0002021!1.10e-08!5;UBERON:0000025!1.63e-08!194;UBERON:0000119!3.07e-08!312;UBERON:0000483!4.13e-08!309;UBERON:0000369!8.10e-08!4;UBERON:0002435!8.10e-08!4;UBERON:0000204!8.10e-08!4;UBERON:0010082!8.10e-08!4;UBERON:0004733!2.82e-07!12;UBERON:0002028!2.82e-07!12;UBERON:0007277!2.82e-07!12;UBERON:0000064!3.12e-07!219;UBERON:0002298!4.23e-07!8;UBERON:0000477!6.22e-07!286 | ||
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|short_description=p4@ROBO2 | |short_description=p4@ROBO2 | ||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p4@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ROBO2_5end |
Coexpression cluster: | C4345_caudate_melanoma_merkel_smallcell_occipital_pons_amygdala |
Association with transcript: | -149bp_to_ENST00000475034_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.16e-07 | 2 |
fibroblast of choroid plexus | 9.85e-07 | 2 |