FFCP PHASE1:Hg19::chr12:58159361..58159394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1594 | |EntrezGene=1594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2606 | |HGNC=2606 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWR7 | |UniProt=F8VWR7 | ||
|association_with_transcript=73bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | |association_with_transcript=73bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | ||
|cluster_id=chr12:58159361..58159394,- | |||
|coexpression_cluster_id=C3310 | |||
|description=CAGE_peak_2_at_CYP27B1_5end | |description=CAGE_peak_2_at_CYP27B1_5end | ||
|id=chr12:58159361..58159394,- | |id=chr12:58159361..58159394,- | ||
|ontology_enrichment_celltype=CL:0002076!6.55e-15!43;CL:0000066!6.85e-15!254;CL:0002368!6.13e-14!13;CL:0000223!4.84e-11!59;CL:0002159!4.75e-08!13;CL:0002202!1.04e-07!9;CL:0002632!1.04e-07!9;CL:0002327!1.26e-07!4;CL:0000068!6.75e-07!3;CL:0000069!6.75e-07!3;CL:0002328!6.75e-07!3;CL:0000307!6.75e-07!3;CL:0000377!6.75e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.55e-15!43;CL:0000066!6.85e-15!254;CL:0002368!6.13e-14!13;CL:0000223!4.84e-11!59;CL:0002159!4.75e-08!13;CL:0002202!1.04e-07!9;CL:0002632!1.04e-07!9;CL:0002327!1.26e-07!4;CL:0000068!6.75e-07!3;CL:0000069!6.75e-07!3;CL:0002328!6.75e-07!3;CL:0000307!6.75e-07!3;CL:0000377!6.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;8.30e-43;13!CL:0002202;6.42e-28;9!CL:0002632;6.42e-28;9!CL:0002076;1.03e-23;42!CL:0000307;4.51e-22;3!CL:0002328;8.22e-22;3!CL:0002621;6.21e-21;3!CL:0000240;8.06e-19;6!CL:0000311;8.06e-19;6!CL:0000079;8.06e-19;6!CL:0000237;8.06e-19;6!CL:0000575;9.33e-15;2!CL:0000312;2.56e-13;5!CL:0002159;2.45e-12;14!CL:0002327;3.39e-08;4!CL:0002336;4.89e-08;1!CL:0002261;4.89e-08;1!CL:0002550;4.89e-08;1!CL:0002170;4.89e-08;1!CL:0000362;1.31e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,7.93e-43,13;CL:0002076,8.63e-30,42;CL:0002202,6.59e-28,9;CL:0002632,6.59e-28,9;CL:0000068,6.21e-22,3;CL:0000069,6.21e-22,3;CL:0002328,6.21e-22,3;CL:0000307,6.21e-22,3;CL:0000377,6.21e-22,3;CL:0002621,4.71e-21,3;CL:0000223,7.82e-21,58;CL:0000240,1.25e-18,6;CL:0000311,1.25e-18,6;CL:0000079,1.25e-18,6;CL:0000237,1.25e-18,6;CL:0000036,1.25e-18,6;CL:0000357,1.25e-18,6;CL:0000114,1.25e-18,6;CL:0000575,1.28e-14,2;CL:0000312,3.03e-13,5;CL:0002159,3.00e-12,14;CL:0000066,3.71e-09,253;CL:0002327,3.45e-08,4;CL:0002550,5.82e-08,1;CL:0002336,7.16e-08,1;CL:0002261,7.16e-08,1;CL:0002170,7.16e-08,1;CL:0000362,1.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;4.51e-22;3!CL:0000357;8.06e-19;6!CL:0000114;8.06e-19;6!CL:0000223;7.56e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!2.60e-08!82;UBERON:0001911!1.26e-07!4;UBERON:0005333!1.26e-07!4;UBERON:0008425!1.26e-07!4;UBERON:0005311!1.26e-07!4;UBERON:0004119!1.67e-07!169;UBERON:0000925!1.67e-07!169;UBERON:0006595!1.67e-07!169;UBERON:0004815!6.75e-07!3;UBERON:0002031!6.75e-07!3 | |ontology_enrichment_uberon=UBERON:0005911!2.60e-08!82;UBERON:0001911!1.26e-07!4;UBERON:0005333!1.26e-07!4;UBERON:0008425!1.26e-07!4;UBERON:0005311!1.26e-07!4;UBERON:0004119!1.67e-07!169;UBERON:0000925!1.67e-07!169;UBERON:0006595!1.67e-07!169;UBERON:0004815!6.75e-07!3;UBERON:0002031!6.75e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.22e-22;3!UBERON:0002031;8.22e-22;3!UBERON:0001949;6.21e-21;3!UBERON:0007196;1.45e-16;15!UBERON:0001558;1.45e-16;15!UBERON:0002185;2.56e-13;5!UBERON:0004807;7.77e-11;22!UBERON:0003126;9.15e-10;7!UBERON:0001005;9.15e-10;7!UBERON:0000485;1.18e-09;7!UBERON:0003929;2.74e-09;7!UBERON:0000065;3.06e-09;44!UBERON:0003729;1.62e-08;13!UBERON:0001911;3.39e-08;4!UBERON:0003350;3.46e-08;8!UBERON:0001828;3.46e-08;8!UBERON:0000964;8.10e-08;4!UBERON:0010409;8.10e-08;4!UBERON:0010371;1.40e-07;31!UBERON:0005178;3.84e-07;34!UBERON:0002224;3.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.21e-22,3;UBERON:0002031,6.21e-22,3;UBERON:0001949,4.71e-21,3;UBERON:0007196,1.47e-16,15;UBERON:0001558,1.47e-16,15;UBERON:0002185,2.17e-13,5;UBERON:0001004,1.93e-11,74;UBERON:0003126,1.05e-09,7;UBERON:0001005,1.05e-09,7;UBERON:0000065,3.08e-09,54;UBERON:0003729,1.67e-08,13;UBERON:0004807,1.89e-08,28;UBERON:0005157,1.96e-08,47;UBERON:0003350,3.13e-08,8;UBERON:0001828,3.13e-08,8;UBERON:0001911,3.45e-08,4;UBERON:0005333,3.45e-08,4;UBERON:0008425,3.45e-08,4;UBERON:0005311,3.45e-08,4;UBERON:0000964,9.46e-08,4;UBERON:0010409,9.46e-08,4;UBERON:0004348,9.46e-08,4;UBERON:0005427,9.46e-08,4;UBERON:0000485,1.19e-07,9;UBERON:0005178,5.28e-07,34;UBERON:0002224,5.28e-07,34;UBERON:0005181,8.69e-07,35 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,2.75826367343678,3.31326510656075,5.9160641626686,0,0,0,2.21598163412751,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,1.93645405075148,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,1.21079900526674,1.47311054395026,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,3.27865759463288,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,1.09750285408626,7.86812272803337,5.02644862058154,1.01847289674383,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,5.28395283946805,7.26584846284905,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.601519410909855,1.84161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,2.31398881505369,5.18913181885787,7.65676274967505,0.910420027699949,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,5.00354986172663,2.01090682660736,7.62236894029258,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0.649243880549111,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,3.62568523298871,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48000651186684,0,0,0,0,0,0,0.0882561266915003,0,0,0.993573058514948,0,0.391102765469606,0.240476460754601,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,1.23138781124008,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p2@CYP27B1 | |short_description=p2@CYP27B1 | ||
}} | }} |
Latest revision as of 16:42, 19 September 2015
Short description: | p2@CYP27B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYP27B1_5end |
Coexpression cluster: | C3310_Keratinocyte_Bronchial_Corneal_Small_Tracheal_Mammary_Prostate |
Association with transcript: | 73bp_to_ENST00000546567, ENST00000547451, uc001sqb.1, uc001sqc.1_5end |
EntrezGene: | CYP27B1 |
HGNC: | 2606 |
UniProt: | F8VWR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.21e-22 | 3 |
epithelium of bronchus | 6.21e-22 | 3 |
gingival epithelium | 4.71e-21 | 3 |
tracheobronchial tree | 1.47e-16 | 15 |
lower respiratory tract | 1.47e-16 | 15 |
bronchus | 2.17e-13 | 5 |
respiratory system | 1.93e-11 | 74 |
trachea | 1.05e-09 | 7 |
respiratory airway | 1.05e-09 | 7 |
respiratory tract | 3.08e-09 | 54 |
mouth mucosa | 1.67e-08 | 13 |
respiratory system epithelium | 1.89e-08 | 28 |
epithelial fold | 1.96e-08 | 47 |
epithelium of mucosa | 3.13e-08 | 8 |
gingiva | 3.13e-08 | 8 |
mammary gland | 3.45e-08 | 4 |
mammary bud | 3.45e-08 | 4 |
mammary ridge | 3.45e-08 | 4 |
mammary placode | 3.45e-08 | 4 |
cornea | 9.46e-08 | 4 |
eye surface | 9.46e-08 | 4 |
optic eminence | 9.46e-08 | 4 |
corneal primordium | 9.46e-08 | 4 |
simple columnar epithelium | 1.19e-07 | 9 |
thoracic cavity element | 5.28e-07 | 34 |
thoracic cavity | 5.28e-07 | 34 |
thoracic segment organ | 8.69e-07 | 35 |