FFCP PHASE1:Hg19::chr14:36982724..36982767,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:36982724..36982767,- to FFCP PHASE1:Hg19::chr14:36982724..36982767,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253970 | |EntrezGene=253970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |HGNC=18387 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG42 | |UniProt=E5RG42 | ||
|association_with_transcript=0bp_to_ENST00000521114_5end | |||
|cluster_id=chr14:36982724..36982767,- | |||
|coexpression_cluster_id=C3425 | |||
|description=CAGE_peak_1_at_SFTA3_5end | |||
|id=chr14:36982724..36982767,- | |||
|ontology_enrichment_celltype=CL:0002368!6.84e-24!13;CL:0002202!1.57e-11!9;CL:0002632!1.57e-11!9;CL:0000082!2.25e-10!19;CL:0000322!7.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000082;6.41e-15;19!CL:0000322;9.83e-12;3!CL:0002553;1.43e-09;1!CL:0002202;1.38e-08;9!CL:0002632;1.38e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.96e-15,19;CL:0000322,8.36e-12,3;CL:0002553,1.43e-09,1;CL:0002202,1.28e-08,9;CL:0002632,1.28e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.50e-26;5!UBERON:0008947;2.52e-21;29!UBERON:0001041;1.12e-12;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;8.32e-10;1!DOID:1324;5.25e-09;15!DOID:3905;7.73e-09;9!DOID:0050615;1.89e-08;16!DOID:3908;1.60e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,8.68e-10,1;DOID:1324,5.25e-09,15;DOID:3905,7.73e-09,9;DOID:0050615,1.89e-08,16;DOID:3908,1.60e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000065!5.71e-19!53;UBERON:0005178!1.36e-18!34;UBERON:0002224!1.36e-18!34;UBERON:0002048!4.12e-18!22;UBERON:0000117!4.12e-18!22;UBERON:0000171!4.12e-18!22;UBERON:0000170!4.12e-18!22;UBERON:0005597!4.12e-18!22;UBERON:0000118!4.12e-18!22;UBERON:0005181!5.64e-18!35;UBERON:0000369!1.03e-16!4;UBERON:0002435!1.03e-16!4;UBERON:0000204!1.03e-16!4;UBERON:0010082!1.03e-16!4;UBERON:0008947!2.54e-16!38;UBERON:0003258!2.54e-16!38;UBERON:0002046!1.29e-14!5;UBERON:0004117!1.29e-14!5;UBERON:0007689!1.29e-14!5;UBERON:0007123!1.29e-14!5;UBERON:0003091!1.29e-14!5;UBERON:0009663!1.68e-14!7;UBERON:0007196!7.76e-14!14;UBERON:0001558!7.76e-14!14;UBERON:0005383!3.67e-13!3;UBERON:0005382!3.67e-13!3;UBERON:0001004!6.63e-13!72;UBERON:0005153!3.60e-12!37;UBERON:0002308!3.20e-11!9;UBERON:0002420!3.20e-11!9;UBERON:0000125!3.20e-11!9;UBERON:0007245!3.20e-11!9;UBERON:0010009!3.20e-11!9;UBERON:0010011!3.20e-11!9;UBERON:0000454!3.20e-11!9;UBERON:0000915!3.82e-11!52;UBERON:0004802!2.25e-10!19;UBERON:0000115!2.25e-10!19;UBERON:0000341!1.29e-09!2;UBERON:0002780!1.69e-09!41;UBERON:0001890!1.69e-09!41;UBERON:0006240!1.69e-09!41;UBERON:0003127!2.05e-09!2;UBERON:0001873!2.23e-09!2;UBERON:0010122!2.23e-09!2;UBERON:0003080!3.14e-09!42;UBERON:0005911!1.19e-08!82;UBERON:0005157!3.35e-08!51;UBERON:0001049!1.55e-07!57;UBERON:0005068!1.55e-07!57;UBERON:0006241!1.55e-07!57;UBERON:0007135!1.55e-07!57;UBERON:0000025!1.88e-07!194;UBERON:0000072!2.25e-07!46;UBERON:0002616!3.30e-07!59;UBERON:0004119!6.22e-07!169;UBERON:0000925!6.22e-07!169;UBERON:0006595!6.22e-07!169;UBERON:0000477!6.37e-07!286;UBERON:0004821!7.68e-07!3;UBERON:0003215!7.68e-07!3;UBERON:0002299!7.68e-07!3;UBERON:0006524!7.68e-07!3;UBERON:0008874!7.68e-07!3;UBERON:0002169!7.68e-07!3;UBERON:0004894!7.68e-07!3;UBERON:0000464!8.77e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;1.37e-28;22!UBERON:0000117;1.37e-28;22!UBERON:0000171;1.37e-28;22!UBERON:0000170;1.37e-28;22!UBERON:0002046;1.50e-26;5!UBERON:0005178;6.24e-22;34!UBERON:0002224;6.24e-22;34!UBERON:0005181;5.94e-21;35!UBERON:0000341;8.58e-17;2!UBERON:0003127;1.69e-16;2!UBERON:0004802;6.41e-15;19!UBERON:0000115;6.41e-15;19!UBERON:0000065;3.02e-13;44!UBERON:0007196;4.52e-13;15!UBERON:0001558;4.52e-13;15!UBERON:0004807;8.02e-13;22!UBERON:0004821;9.83e-12;3!UBERON:0007499;9.83e-12;3!UBERON:0003215;9.83e-12;3!UBERON:0010368;9.83e-12;3!UBERON:0009911;9.83e-12;3!UBERON:0002299;9.83e-12;3!UBERON:0006524;9.83e-12;3!UBERON:0008874;9.83e-12;3!UBERON:0002169;9.83e-12;3!UBERON:0004894;9.83e-12;3!UBERON:0000915;3.68e-11;52!UBERON:0002171;1.16e-09;1!UBERON:0006518;1.16e-09;1!UBERON:0008949;1.16e-09;1!UBERON:0000101;1.16e-09;1!UBERON:0002167;1.16e-09;1!UBERON:0000072;1.34e-09;37!UBERON:0009856;5.09e-09;4!UBERON:0001004;6.07e-07;65!UBERON:0005911;6.13e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.24e-28,22;UBERON:0000117,1.24e-28,22;UBERON:0000171,1.24e-28,22;UBERON:0000170,1.24e-28,22;UBERON:0005597,1.24e-28,22;UBERON:0000118,1.24e-28,22;UBERON:0005178,8.58e-27,34;UBERON:0002224,8.58e-27,34;UBERON:0002046,1.60e-26,5;UBERON:0004117,1.60e-26,5;UBERON:0007689,1.60e-26,5;UBERON:0007123,1.60e-26,5;UBERON:0003091,1.60e-26,5;UBERON:0005181,5.63e-26,35;UBERON:0008947,8.76e-24,38;UBERON:0003258,8.76e-24,38;UBERON:0005153,1.78e-20,37;UBERON:0005911,5.16e-17,82;UBERON:0000915,6.83e-17,52;UBERON:0000341,9.68e-17,2;UBERON:0003127,2.33e-16,2;UBERON:0000065,3.37e-16,54;UBERON:0005157,8.80e-16,47;UBERON:0004802,5.96e-15,19;UBERON:0000115,5.96e-15,19;UBERON:0007196,4.64e-13,15;UBERON:0001558,4.64e-13,15;UBERON:0009722,3.51e-12,11;UBERON:0007690,3.51e-12,11;UBERON:0004821,8.36e-12,3;UBERON:0003215,8.36e-12,3;UBERON:0010368,8.36e-12,3;UBERON:0009911,8.36e-12,3;UBERON:0002299,8.36e-12,3;UBERON:0006524,8.36e-12,3;UBERON:0008874,8.36e-12,3;UBERON:0002169,8.36e-12,3;UBERON:0004894,8.36e-12,3;UBERON:0001004,2.52e-11,74;UBERON:0001007,2.54e-11,145;UBERON:0001555,2.54e-11,145;UBERON:0007026,2.54e-11,145;UBERON:0004119,5.41e-10,160;UBERON:0000925,5.41e-10,160;UBERON:0006595,5.41e-10,160;UBERON:0004807,5.43e-10,28;UBERON:0000072,7.46e-10,47;UBERON:0002171,1.21e-09,1;UBERON:0006518,1.21e-09,1;UBERON:0008949,1.21e-09,1;UBERON:0000101,1.21e-09,1;UBERON:0002167,1.21e-09,1;UBERON:0005177,2.30e-09,101;UBERON:0001041,2.34e-09,87;UBERON:0001048,1.17e-08,160;UBERON:0009569,3.05e-08,112;UBERON:0004921,1.06e-07,118;UBERON:0008814,1.71e-07,18 | |||
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| ||
|short_description=p1@SFTA3 | |||
}} | }} |
Latest revision as of 22:18, 19 September 2015
Short description: | p1@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFTA3_5end |
Coexpression cluster: | C3425_prostate_papillary_bronchioalveolar_small_lung_thyroid_nonsmall |
Association with transcript: | 0bp_to_ENST00000521114_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | E5RG42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.96e-15 | 19 |
pneumocyte | 8.36e-12 | 3 |
lung fibroblast | 1.43e-09 | 1 |
epithelial cell of tracheobronchial tree | 1.28e-08 | 9 |
epithelial cell of lower respiratory tract | 1.28e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.68e-10 | 1 |
lung cancer | 5.25e-09 | 15 |
lung carcinoma | 7.73e-09 | 9 |
respiratory system cancer | 1.89e-08 | 16 |
non-small cell lung carcinoma | 1.60e-07 | 5 |