FFCP PHASE1:Hg19::chr1:205012264..205012273,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:205012264..205012273,+
|short_description=p4@CNTN2
|description=CAGE_peak_4_at_CNTN2_5end
|association_with_transcript=-51bp_to_ENST00000331830_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6900 | |EntrezGene=6900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2172 | |HGNC=2172 | ||
|TSSclassifier=strong | |||
|UniProt=Q02246 | |UniProt=Q02246 | ||
|association_with_transcript=-51bp_to_ENST00000331830_5end | |||
|cluster_id=chr1:205012264..205012273,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_CNTN2_5end | |||
|id=chr1:205012264..205012273,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.40e-09;2!CL:0000242;7.40e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.12e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.68e-22;82!UBERON:0006241;2.05e-12;3!UBERON:0003057;2.05e-12;3!UBERON:0006215;8.97e-12;3!UBERON:0002532;9.60e-07;206!UBERON:0010316;9.60e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-91!57;UBERON:0005068!1.92e-91!57;UBERON:0006241!1.92e-91!57;UBERON:0007135!1.92e-91!57;UBERON:0000073!3.41e-81!94;UBERON:0001016!3.41e-81!94;UBERON:0001017!2.18e-79!82;UBERON:0005743!5.30e-78!86;UBERON:0002616!6.18e-76!59;UBERON:0000955!6.89e-72!69;UBERON:0006238!6.89e-72!69;UBERON:0002780!8.92e-66!41;UBERON:0001890!8.92e-66!41;UBERON:0006240!8.92e-66!41;UBERON:0003075!3.55e-64!86;UBERON:0007284!3.55e-64!86;UBERON:0003080!5.34e-64!42;UBERON:0002346!1.01e-60!90;UBERON:0002020!5.24e-58!34;UBERON:0003528!5.24e-58!34;UBERON:0001893!6.08e-58!34;UBERON:0002791!1.18e-55!33;UBERON:0001869!6.97e-53!32;UBERON:0007023!7.28e-52!115;UBERON:0003056!2.97e-46!61;UBERON:0004121!5.34e-44!169;UBERON:0002619!4.29e-43!22;UBERON:0000924!1.26e-42!173;UBERON:0006601!1.26e-42!173;UBERON:0000033!2.73e-40!123;UBERON:0001950!9.12e-39!20;UBERON:0000153!8.52e-38!129;UBERON:0007811!8.52e-38!129;UBERON:0000956!2.10e-37!25;UBERON:0000203!2.10e-37!25;UBERON:0003076!2.89e-27!15;UBERON:0003057!2.89e-27!15;UBERON:0004732!9.36e-23!13;UBERON:0002308!1.76e-22!9;UBERON:0000125!1.76e-22!9;UBERON:0002420!6.95e-22!9;UBERON:0007245!6.95e-22!9;UBERON:0010009!6.95e-22!9;UBERON:0010011!6.95e-22!9;UBERON:0000454!6.95e-22!9;UBERON:0004733!2.83e-20!12;UBERON:0002028!2.83e-20!12;UBERON:0007277!2.83e-20!12;UBERON:0000025!9.85e-20!194;UBERON:0009663!1.39e-17!7;UBERON:0002298!2.17e-16!8;UBERON:0000200!9.11e-15!6;UBERON:0001871!2.07e-14!7;UBERON:0004111!2.25e-13!241;UBERON:0002680!2.44e-13!9;UBERON:0001895!2.44e-13!9;UBERON:0010092!2.44e-13!9;UBERON:0002021!5.29e-13!5;UBERON:0000349!1.73e-12!5;UBERON:0000064!2.76e-11!219;UBERON:0000483!7.22e-11!309;UBERON:0000119!1.23e-10!312;UBERON:0000369!4.03e-10!4;UBERON:0002435!4.03e-10!4;UBERON:0000204!4.03e-10!4;UBERON:0010082!4.03e-10!4;UBERON:0000475!5.08e-10!365;UBERON:0000477!5.08e-10!286;UBERON:0001894!3.16e-09!7;UBERON:0006222!3.16e-09!7;UBERON:0006331!3.72e-09!3;UBERON:0000988!4.71e-09!3;UBERON:0001896!5.10e-09!3;UBERON:0005290!5.10e-09!3;UBERON:0010096!5.10e-09!3;UBERON:0002240!7.15e-09!3;UBERON:0001872!1.49e-08!5;UBERON:0002771!3.88e-08!3;UBERON:0005383!6.64e-08!3;UBERON:0005382!6.64e-08!3;UBERON:0000062!6.34e-07!511;UBERON:0005162!7.52e-07!2;UBERON:0000122!7.52e-07!2;UBERON:0002037!9.19e-07!6;UBERON:0006215!9.19e-07!6;UBERON:0001897!9.34e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.22e-56;34!UBERON:0003528;7.83e-54;34!UBERON:0002020;7.83e-54;34!UBERON:0002791;1.17e-51;32!UBERON:0001869;1.96e-51;32!UBERON:0000073;9.97e-50;53!UBERON:0002616;9.97e-50;53!UBERON:0002619;4.20e-47;22!UBERON:0002780;5.88e-47;41!UBERON:0001890;5.88e-47;41!UBERON:0000956;3.75e-41;25!UBERON:0000203;3.75e-41;25!UBERON:0001950;5.19e-41;20!UBERON:0001017;1.62e-33;75!UBERON:0000955;2.45e-31;68!UBERON:0001016;4.60e-29;83!UBERON:0004732;2.31e-28;13!UBERON:0000125;2.17e-26;9!UBERON:0002308;2.17e-26;9!UBERON:0002420;1.85e-25;9!UBERON:0007245;1.85e-25;9!UBERON:0010009;1.85e-25;9!UBERON:0010011;1.85e-25;9!UBERON:0000454;1.85e-25;9!UBERON:0004733;8.86e-25;12!UBERON:0002028;8.86e-25;12!UBERON:0002298;1.39e-23;6!UBERON:0009663;3.14e-19;7!UBERON:0000349;1.30e-17;5!UBERON:0007023;1.35e-17;114!UBERON:0000200;3.73e-15;6!UBERON:0002680;6.17e-15;9!UBERON:0001895;6.17e-15;9!UBERON:0011216;9.43e-13;132!UBERON:0001871;9.76e-13;6!UBERON:0000988;1.04e-12;3!UBERON:0002021;1.19e-12;5!UBERON:0001896;1.26e-12;3!UBERON:0005290;1.26e-12;3!UBERON:0002240;2.05e-12;3!UBERON:0005174;2.05e-12;3!UBERON:0001137;2.05e-12;3!UBERON:0001872;3.39e-12;5!UBERON:0005162;1.85e-09;2!UBERON:0000122;1.85e-09;2!UBERON:0001897;2.50e-09;2!UBERON:0010225;2.50e-09;2!UBERON:0001875;3.80e-09;2!UBERON:0006514;3.80e-09;2!UBERON:0002148;4.72e-09;2!UBERON:0006331;4.72e-09;2!UBERON:0009662;4.72e-09;2!UBERON:0000369;1.29e-08;4!UBERON:0002435;1.29e-08;4!UBERON:0000204;1.29e-08;4!UBERON:0010314;2.39e-08;132!UBERON:0002771;3.57e-08;2!UBERON:0001876;5.45e-08;2!UBERON:0001954;5.45e-08;2!UBERON:0003022;5.45e-08;2!UBERON:0002421;5.45e-08;2!UBERON:0002600;5.45e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.37e-103,56;UBERON:0005068,2.37e-103,56;UBERON:0006241,2.37e-103,56;UBERON:0007135,2.37e-103,56;UBERON:0000073,5.80e-93,53;UBERON:0002616,5.80e-93,53;UBERON:0001016,5.68e-82,89;UBERON:0001017,1.79e-79,81;UBERON:0000955,3.73e-78,68;UBERON:0006238,3.73e-78,68;UBERON:0003075,6.10e-72,82;UBERON:0007284,6.10e-72,82;UBERON:0002780,2.10e-68,41;UBERON:0001890,2.10e-68,41;UBERON:0003080,2.10e-68,41;UBERON:0006240,2.10e-68,41;UBERON:0002346,3.42e-68,86;UBERON:0003528,1.21e-65,34;UBERON:0002020,1.21e-65,34;UBERON:0001893,1.47e-65,34;UBERON:0010371,4.97e-61,104;UBERON:0002791,9.19e-59,32;UBERON:0001869,1.85e-58,32;UBERON:0007023,1.77e-55,114;UBERON:0003056,1.45e-47,61;UBERON:0002619,2.12e-47,22;UBERON:0010314,1.24e-43,132;UBERON:0004121,9.42e-43,171;UBERON:0000924,9.42e-43,171;UBERON:0006601,9.42e-43,171;UBERON:0000956,2.06e-41,25;UBERON:0000203,2.06e-41,25;UBERON:0001950,3.25e-41,20;UBERON:0003076,6.62e-35,15;UBERON:0003057,6.62e-35,15;UBERON:0011216,9.98e-29,223;UBERON:0004732,2.60e-28,13;UBERON:0000125,2.29e-26,9;UBERON:0002308,2.29e-26,9;UBERON:0002420,1.43e-25,9;UBERON:0007245,1.43e-25,9;UBERON:0010009,1.43e-25,9;UBERON:0010011,1.43e-25,9;UBERON:0000454,1.43e-25,9;UBERON:0004733,9.94e-25,12;UBERON:0002028,9.94e-25,12;UBERON:0007277,9.94e-25,12;UBERON:0000025,7.82e-24,192;UBERON:0002298,1.15e-23,6;UBERON:0009663,3.36e-19,7;UBERON:0000349,7.41e-18,5;UBERON:0004111,3.35e-17,240;UBERON:0000200,3.46e-15,6;UBERON:0002680,7.43e-15,9;UBERON:0001895,7.43e-15,9;UBERON:0010092,7.43e-15,9;UBERON:0000483,2.35e-14,306;UBERON:0000119,4.04e-14,309;UBERON:0001871,7.76e-13,6;UBERON:0000988,9.81e-13,3;UBERON:0001896,1.10e-12,3;UBERON:0005290,1.10e-12,3;UBERON:0010096,1.10e-12,3;UBERON:0002021,1.31e-12,5;UBERON:0002240,1.82e-12,3;UBERON:0005174,1.82e-12,3;UBERON:0001137,1.82e-12,3;UBERON:0001872,3.50e-12,5;UBERON:0005162,1.85e-09,2;UBERON:0000122,1.85e-09,2;UBERON:0001897,2.55e-09,2;UBERON:0010225,2.55e-09,2;UBERON:0001875,4.11e-09,2;UBERON:0006514,4.11e-09,2;UBERON:0002148,4.63e-09,2;UBERON:0006331,4.63e-09,2;UBERON:0009662,4.63e-09,2;UBERON:0000369,1.27e-08,4;UBERON:0002435,1.27e-08,4;UBERON:0000204,1.27e-08,4;UBERON:0010082,1.27e-08,4;UBERON:0002771,3.38e-08,2;UBERON:0001876,3.78e-08,2;UBERON:0001954,4.22e-08,2;UBERON:0003022,4.22e-08,2;UBERON:0002421,4.22e-08,2;UBERON:0002600,4.22e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69332746095218,4.36010061360701,0,0,0,0,0,0,0,1.03423011972439,0,0,1.77148277162768,0.844175070377856,3.05163472634166,1.21637185924347,3.25102380848902,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,13.2780231971934,0,11.2446933948163,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.89932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,5.33930977678773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.90684768556206,0,0.137539436597234,0,0,0,1.88323625639876,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85199668716218,5.55376927319298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,1.6274820991845,4.58727356552057,4.43716206147409,8.50720720296953,0.276697269872462,0,0,0,0,3.27834434064817,6.08668320165466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,2.81367616868034,2.91126990771041,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.24802287837608,7.08482881627925,2.71377560397157,4.1023272848151,0.504143392443436,3.25039086581824,3.87541549516443,17.1323304310985,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03919130782776,2.34323429584154,1.2401207790071,4.12202766260394,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,5.7774273030307,3.94636641377094,0,0,0,1.25692471932802,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,9.61911488863232,3.26751040359795,3.3812458206672,0,0,0,0,0,0,0,0,0,11.1804874858132,0,3.05961705859116,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,14.0958804707992,8.06777367722783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69332746095218,4.36010061360701,0,0,0,0,0,0,0,1.03423011972439,0,0,1.77148277162768,0.844175070377856,3.05163472634166,1.21637185924347,3.25102380848902,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,13.2780231971934,0,11.2446933948163,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.89932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,5.33930977678773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.90684768556206,0,0.137539436597234,0,0,0,1.88323625639876,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85199668716218,5.55376927319298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,1.6274820991845,4.58727356552057,4.43716206147409,8.50720720296953,0.276697269872462,0,0,0,0,3.27834434064817,6.08668320165466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,2.81367616868034,2.91126990771041,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.24802287837608,7.08482881627925,2.71377560397157,4.1023272848151,0.504143392443436,3.25039086581824,3.87541549516443,17.1323304310985,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03919130782776,2.34323429584154,1.2401207790071,4.12202766260394,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,5.7774273030307,3.94636641377094,0,0,0,1.25692471932802,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,9.61911488863232,3.26751040359795,3.3812458206672,0,0,0,0,0,0,0,0,0,11.1804874858132,0,3.05961705859116,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,14.0958804707992,8.06777367722783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@CNTN2 | |||
}} | }} |
Latest revision as of 02:01, 20 September 2015
Short description: | p4@CNTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNTN2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -51bp_to_ENST00000331830_5end |
EntrezGene: | CNTN2 |
HGNC: | 2172 |
UniProt: | Q02246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.12e-09 | 2 |