FFCP PHASE1:Hg19::chr17:39942208..39942219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |UniProt=C9JKY1 | ||
|association_with_transcript=102bp_to_ENST00000449889_5end | |association_with_transcript=102bp_to_ENST00000449889_5end | ||
|cluster_id=chr17:39942208..39942219,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_7_at_JUP_5end | |description=CAGE_peak_7_at_JUP_5end | ||
|id=chr17:39942208..39942219,- | |id=chr17:39942208..39942219,- | ||
|ontology_enrichment_celltype=CL:0000066!6.43e-40!254;CL:0002076!2.72e-29!43;CL:0000223!8.30e-22!59;CL:0002251!5.62e-15!21;CL:0002368!3.08e-13!13;CL:0002202!4.46e-09!9;CL:0002632!4.46e-09!9;CL:0002159!7.72e-09!13 | |ontology_enrichment_celltype=CL:0000066!6.43e-40!254;CL:0002076!2.72e-29!43;CL:0000223!8.30e-22!59;CL:0002251!5.62e-15!21;CL:0002368!3.08e-13!13;CL:0002202!4.46e-09!9;CL:0002632!4.46e-09!9;CL:0002159!7.72e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.84e-31;42!CL:0002368;7.52e-24;13!CL:0002251;1.03e-16;20!CL:0002202;4.18e-16;9!CL:0002632;4.18e-16;9!CL:0002159;2.14e-12;14!CL:0002328;1.40e-08;3!CL:0000307;5.15e-08;3!CL:0002621;1.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.83e-42,42;CL:0000066,7.64e-35,253;CL:0000223,2.17e-32,58;CL:0002368,3.98e-24,13;CL:0002251,9.31e-17,20;CL:0002202,3.11e-16,9;CL:0002632,3.11e-16,9;CL:0002159,1.50e-12,14;CL:0002328,1.18e-08,3;CL:0000068,4.49e-08,3;CL:0000069,4.49e-08,3;CL:0000307,4.49e-08,3;CL:0000377,4.49e-08,3;CL:0000076,5.54e-08,63;CL:0002621,9.30e-08,3;CL:0002321,1.64e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.45e-16;58!CL:0000377;5.15e-08;3 | |||
|ontology_enrichment_disease=DOID:305!8.41e-27!106;DOID:0050687!1.62e-17!143;DOID:1749!1.88e-15!14;DOID:299!5.51e-13!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.62e-17;25!DOID:1749;7.86e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.06e-17,25;DOID:1749,7.94e-16,14;DOID:305,8.95e-16,106;DOID:0050687,1.98e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.34e-27!169;UBERON:0000925!1.34e-27!169;UBERON:0006595!1.34e-27!169;UBERON:0001004!1.76e-23!72;UBERON:0001007!1.70e-20!155;UBERON:0001555!1.70e-20!155;UBERON:0007026!1.70e-20!155;UBERON:0000065!6.33e-18!53;UBERON:0000077!2.73e-17!130;UBERON:0004921!1.38e-16!129;UBERON:0004185!1.38e-16!129;UBERON:0000072!4.92e-14!46;UBERON:0001041!1.97e-13!98;UBERON:0008947!4.69e-13!38;UBERON:0003258!4.69e-13!38;UBERON:0000464!5.50e-12!104;UBERON:0005911!4.11e-11!82;UBERON:0000161!1.29e-10!35;UBERON:0005153!2.14e-10!37;UBERON:0000466!4.56e-10!126;UBERON:0000166!5.46e-10!21;UBERON:0005178!4.33e-09!34;UBERON:0002224!4.33e-09!34;UBERON:0000344!4.66e-09!12;UBERON:0005631!9.48e-09!14;UBERON:0000158!9.48e-09!14;UBERON:0000064!1.06e-08!219;UBERON:0005181!1.17e-08!35;UBERON:0000062!1.30e-08!511;UBERON:0000915!1.60e-08!52;UBERON:0005157!3.26e-08!51;UBERON:0001557!1.19e-07!19;UBERON:0007196!1.19e-07!14;UBERON:0001558!1.19e-07!14;UBERON:0003104!1.21e-07!238;UBERON:0009142!1.21e-07!238;UBERON:0000165!1.82e-07!28;UBERON:0000930!1.82e-07!28;UBERON:0005156!2.53e-07!59;UBERON:0000990!2.53e-07!59;UBERON:0006554!3.70e-07!44;UBERON:0004807!4.00e-07!28;UBERON:0003729!5.15e-07!5;UBERON:0001008!7.25e-07!45;UBERON:0000468!7.35e-07!659;UBERON:0003100!7.52e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;6.60e-14;20!UBERON:0007196;3.02e-11;15!UBERON:0001558;3.02e-11;15!UBERON:0005911;3.71e-11;36!UBERON:0004807;1.05e-10;22!UBERON:0003729;1.89e-10;13!UBERON:0003343;3.19e-10;4!UBERON:0004785;3.19e-10;4!UBERON:0000974;7.15e-10;6!UBERON:0005178;2.13e-09;34!UBERON:0002224;2.13e-09;34!UBERON:0000165;3.03e-09;28!UBERON:0004815;1.40e-08;3!UBERON:0002031;1.40e-08;3!UBERON:0005181;1.52e-08;35!UBERON:0000486;1.71e-08;12!UBERON:0000161;1.84e-08;19!UBERON:0000166;1.84e-08;19!UBERON:0001949;1.04e-07;3!UBERON:0000365;1.81e-07;5!UBERON:0001723;1.97e-07;3!UBERON:0001033;1.97e-07;3!UBERON:0000915;4.42e-07;52!UBERON:0003350;5.24e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-15,160;UBERON:0000925,1.39e-15,160;UBERON:0006595,1.39e-15,160;UBERON:0001004,1.70e-15,74;UBERON:0000344,8.16e-14,20;UBERON:0000065,9.10e-12,54;UBERON:0007196,2.89e-11,15;UBERON:0001558,2.89e-11,15;UBERON:0001007,1.55e-10,145;UBERON:0001555,1.55e-10,145;UBERON:0007026,1.55e-10,145;UBERON:0000166,1.86e-10,22;UBERON:0003729,1.90e-10,13;UBERON:0005178,2.60e-10,34;UBERON:0002224,2.60e-10,34;UBERON:0003343,4.16e-10,4;UBERON:0004785,4.16e-10,4;UBERON:0000915,5.50e-10,52;UBERON:0005181,6.41e-10,35;UBERON:0000161,2.90e-09,36;UBERON:0000165,8.91e-09,29;UBERON:0000930,8.91e-09,29;UBERON:0001041,1.08e-08,87;UBERON:0004815,1.18e-08,3;UBERON:0002031,1.18e-08,3;UBERON:0000072,1.50e-08,47;UBERON:0004921,2.89e-08,118;UBERON:0003102,3.74e-08,99;UBERON:0004807,7.21e-08,28;UBERON:0005157,7.92e-08,47;UBERON:0005153,8.51e-08,37;UBERON:0001949,9.30e-08,3;UBERON:0003100,1.60e-07,41;UBERON:0000365,1.73e-07,5;UBERON:0001723,2.78e-07,3;UBERON:0001033,2.78e-07,3;UBERON:0010056,2.78e-07,3;UBERON:0003350,4.98e-07,8;UBERON:0005911,6.67e-07,82 | |||
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| ||
|short_description=p7@JUP | |short_description=p7@JUP | ||
}} | }} |
Latest revision as of 07:14, 20 September 2015
Short description: | p7@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_JUP_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 102bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.83e-42 | 42 |
epithelial cell | 7.64e-35 | 253 |
endodermal cell | 2.17e-32 | 58 |
respiratory epithelial cell | 3.98e-24 | 13 |
epithelial cell of alimentary canal | 9.31e-17 | 20 |
epithelial cell of tracheobronchial tree | 3.11e-16 | 9 |
epithelial cell of lower respiratory tract | 3.11e-16 | 9 |
general ecto-epithelial cell | 1.50e-12 | 14 |
bronchial epithelial cell | 1.18e-08 | 3 |
duct epithelial cell | 4.49e-08 | 3 |
branched duct epithelial cell | 4.49e-08 | 3 |
tracheal epithelial cell | 4.49e-08 | 3 |
tracheoblast | 4.49e-08 | 3 |
squamous epithelial cell | 5.54e-08 | 63 |
gingival epithelial cell | 9.30e-08 | 3 |
embryonic cell | 1.64e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.06e-17 | 25 |
squamous cell carcinoma | 7.94e-16 | 14 |
carcinoma | 8.95e-16 | 106 |
cell type cancer | 1.98e-09 | 143 |