FFCP PHASE1:Hg19::chr17:39942268..39942282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |UniProt=C9JKY1 | ||
|association_with_transcript=39bp_to_ENST00000449889_5end | |association_with_transcript=39bp_to_ENST00000449889_5end | ||
|cluster_id=chr17:39942268..39942282,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_6_at_JUP_5end | |description=CAGE_peak_6_at_JUP_5end | ||
|id=chr17:39942268..39942282,- | |id=chr17:39942268..39942282,- | ||
|ontology_enrichment_celltype=CL:0000066!3.84e-43!254;CL:0002076!1.48e-21!43;CL:0000223!3.89e-15!59;CL:0002251!1.64e-11!21;CL:0002368!2.57e-10!13;CL:0000076!3.50e-08!62;CL:0002159!3.79e-07!13;CL:0002202!4.19e-07!9;CL:0002632!4.19e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.84e-43!254;CL:0002076!1.48e-21!43;CL:0000223!3.89e-15!59;CL:0002251!1.64e-11!21;CL:0002368!2.57e-10!13;CL:0000076!3.50e-08!62;CL:0002159!3.79e-07!13;CL:0002202!4.19e-07!9;CL:0002632!4.19e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.68e-30;42!CL:0002251;9.12e-20;20!CL:0002368;1.36e-19;13!CL:0002202;3.73e-13;9!CL:0002632;3.73e-13;9!CL:0002159;5.59e-13;14!CL:0000622;1.71e-10;5!CL:0000244;6.94e-09;4!CL:0000731;6.94e-09;4!CL:0000154;1.22e-08;6!CL:0002328;3.04e-07;3!CL:0000307;6.01e-07;3!CL:0002623;9.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.71e-40,42;CL:0000066,4.02e-39,253;CL:0000223,1.15e-29,58;CL:0002251,7.36e-20,20;CL:0002368,1.54e-19,13;CL:0002202,3.72e-13,9;CL:0002632,3.72e-13,9;CL:0002159,5.83e-13,14;CL:0000622,1.91e-10,5;CL:0000244,6.96e-09,4;CL:0000731,6.96e-09,4;CL:0000154,1.34e-08,6;CL:0002328,2.87e-07,3;CL:0000076,4.72e-07,63;CL:0000068,5.62e-07,3;CL:0000069,5.62e-07,3;CL:0000307,5.62e-07,3;CL:0000377,5.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.76e-14;58!CL:0000377;6.01e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.43e-24!106;DOID:0050687!3.76e-15!143;DOID:1749!4.78e-11!14;DOID:299!1.48e-08!25;DOID:162!4.16e-08!235;DOID:14566!7.67e-08!239 | |ontology_enrichment_disease=DOID:305!1.43e-24!106;DOID:0050687!3.76e-15!143;DOID:1749!4.78e-11!14;DOID:299!1.48e-08!25;DOID:162!4.16e-08!235;DOID:14566!7.67e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.81e-14;14!DOID:299;5.66e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.52e-20,106;DOID:1749,3.55e-14,14;DOID:0050687,9.62e-13,143;DOID:299,5.35e-12,25 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.59e-18!72;UBERON:0004119!1.63e-16!169;UBERON:0000925!1.63e-16!169;UBERON:0006595!1.63e-16!169;UBERON:0000065!8.62e-15!53;UBERON:0000072!2.66e-12!46;UBERON:0001007!2.92e-12!155;UBERON:0001555!2.92e-12!155;UBERON:0007026!2.92e-12!155;UBERON:0000077!9.21e-12!130;UBERON:0008947!6.27e-11!38;UBERON:0003258!6.27e-11!38;UBERON:0001041!2.63e-10!98;UBERON:0004921!4.94e-10!129;UBERON:0004185!4.94e-10!129;UBERON:0005911!6.75e-09!82;UBERON:0000464!6.82e-09!104;UBERON:0005153!2.06e-08!37;UBERON:0001557!2.80e-08!19;UBERON:0000161!4.03e-08!35;UBERON:0000166!1.20e-07!21;UBERON:0000466!2.47e-07!126;UBERON:0001737!2.78e-07!9;UBERON:0005156!2.96e-07!59;UBERON:0000990!2.96e-07!59;UBERON:0003104!3.91e-07!238;UBERON:0009142!3.91e-07!238;UBERON:0005157!4.19e-07!51;UBERON:0000915!7.37e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;8.43e-12;44!UBERON:0000161;9.23e-12;19!UBERON:0000166;9.23e-12;19!UBERON:0000165;1.44e-11;28!UBERON:0001004;1.59e-11;65!UBERON:0000344;1.62e-10;20!UBERON:0000365;2.30e-10;5!UBERON:0000072;2.36e-10;37!UBERON:0000486;1.22e-09;12!UBERON:0005911;3.97e-09;36!UBERON:0007196;5.51e-09;15!UBERON:0001558;5.51e-09;15!UBERON:0005910;1.56e-08;6!UBERON:0001737;1.93e-08;9!UBERON:0001557;1.93e-08;9!UBERON:0004807;3.48e-08;22!UBERON:0003729;4.53e-08;13!UBERON:0003343;1.83e-07;4!UBERON:0004785;1.83e-07;4!UBERON:0001041;2.30e-07;14!UBERON:0004815;3.04e-07;3!UBERON:0002031;3.04e-07;3!UBERON:0000974;3.86e-07;6!UBERON:0005178;6.24e-07;34!UBERON:0002224;6.24e-07;34!UBERON:0005181;8.08e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.62e-24,74;UBERON:0004119,2.10e-23,160;UBERON:0000925,2.10e-23,160;UBERON:0006595,2.10e-23,160;UBERON:0000065,2.89e-17,54;UBERON:0001007,5.59e-17,145;UBERON:0001555,5.59e-17,145;UBERON:0007026,5.59e-17,145;UBERON:0001041,1.49e-15,87;UBERON:0000072,3.07e-14,47;UBERON:0004921,7.14e-14,118;UBERON:0000166,1.29e-13,22;UBERON:0008947,2.23e-12,38;UBERON:0003258,2.23e-12,38;UBERON:0000165,4.61e-11,29;UBERON:0000930,4.61e-11,29;UBERON:0000161,6.41e-11,36;UBERON:0000344,1.44e-10,20;UBERON:0000365,2.54e-10,5;UBERON:0007196,5.30e-09,15;UBERON:0001558,5.30e-09,15;UBERON:0001557,8.28e-09,19;UBERON:0005910,1.69e-08,6;UBERON:0003102,1.72e-08,99;UBERON:0001737,1.96e-08,9;UBERON:0000033,2.24e-08,56;UBERON:0003729,3.77e-08,13;UBERON:0000153,6.43e-08,62;UBERON:0007811,6.43e-08,62;UBERON:0005178,8.40e-08,34;UBERON:0002224,8.40e-08,34;UBERON:0003343,1.29e-07,4;UBERON:0004785,1.29e-07,4;UBERON:0005181,1.76e-07,35;UBERON:0005911,2.46e-07,82;UBERON:0004815,2.87e-07,3;UBERON:0002031,2.87e-07,3;UBERON:0000915,4.35e-07,52;UBERON:0001444,4.93e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.94880723801811,5.58240934377942,0.655324116390517,3.69273769519835,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.619264493264304,11.9524759182261,10.843413076017,11.4623743151704,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,2.27685187643779,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,21.1291267209674,17.0560843680838,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,19.624232346414,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1843473012255,4.09119180886252,7.7437240755031,0.243947412259191,0.265059536642971,0.232387885739037,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,2.36613600079688,2.69735504124963,0.482022059766964,1.32352767278873,2.39667388501647,3.32178866755535,2.56179485504312,2.74710051175484,0.769494313892781,0,0,0,0,0,0,0,0,0.737930631258681,0,19.4258005173267,15.7362454560667,3.01586917234893,6.66636805141413,0,0,0,0,0.117408694235822,0,0,0,7.11183958163348,3.43394464837949,0,0,0,5.62403003920662,3.02367830757947,3.96970272278682,4.29880908973672,3.77824120068151,9.58456697913028,0,0.176096868026452,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.362578348774867,6.81721999031168,9.9447468050768,0,0,0.262248829918848,1.35359883872224,0.847168708148562,0,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0.764628819135115,2.49322802678617,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,10.9110452219273,13.0012049207304,0,0,0,0,0,0,0,0,0,7.27253627588304,4.03599141466723,3.44554323735377,6.57525575561074,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.808729926293264,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,7.9864353562175,7.37332503089366,9.80018863751903,0.0941438007767792,14.6371826708218,16.8471475667626,12.8594744525636,3.44585100310439,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,3.58116727106535,1.48482340416319,4.60741053148848,0,0,0.111308705022906,0,0.211125408127993,0,0,0.503865495708552,0,0,0,2.15684042753584,1.07412704805365,0,0,0,0,0,0,0,1.5625665665114,0.962059999958153,0.724999575434793,9.44485620769647,1.01701460117107,0.945550727071745,0,0,0,0,0,0,0,0,0,1.74301541630384,5.43752602686553,1.30815439456455,0,0.69169171316418,0.359030577639089,2.06430006651815,1.5950057986596,0.641183153813036,1.06606955203727,0,0.156980256395025,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0.569261198172555,0.158936578980379,1.05499032264014,0.979396848954886,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,3.52196314077761,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,1.90915712168644,8.23136138280772,3.65648667637691,0,0,0.387025325156341,0.803982487948041,0.410577285266046,7.37116525311988,0,0.90392296312213,0,0,0,1.56441106187842,1.52301758477914,0.213452994739353,0.39961921916426,1.29681375438695,0,0,1.00838358591705,0,10.8419255923726,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,2.39614800598789,0.429226048136571,0,0,0,1.16495949527454,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0.2249738915515,6.1904156364636,0,11.404779378375,0.236417121897595,0.681909645754975,0,0.35857467866569,2.87872795979168,0,0,0.5085370753095,0,1.72844298240254,0,0,0,0,0.113312091520126,0,0,0,0,1.02652102730598,11.2770403570668,0.106787412567695,0.157204305099666,0,0,0,0,3.83004754662109,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,11.1903606175556,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,5.29997679905538,2.94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| ||
|short_description=p6@JUP | |short_description=p6@JUP | ||
}} | }} |
Latest revision as of 07:17, 20 September 2015
Short description: | p6@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_JUP_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 39bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.71e-40 | 42 |
epithelial cell | 4.02e-39 | 253 |
endodermal cell | 1.15e-29 | 58 |
epithelial cell of alimentary canal | 7.36e-20 | 20 |
respiratory epithelial cell | 1.54e-19 | 13 |
epithelial cell of tracheobronchial tree | 3.72e-13 | 9 |
epithelial cell of lower respiratory tract | 3.72e-13 | 9 |
general ecto-epithelial cell | 5.83e-13 | 14 |
acinar cell | 1.91e-10 | 5 |
transitional epithelial cell | 6.96e-09 | 4 |
urothelial cell | 6.96e-09 | 4 |
protein secreting cell | 1.34e-08 | 6 |
bronchial epithelial cell | 2.87e-07 | 3 |
squamous epithelial cell | 4.72e-07 | 63 |
duct epithelial cell | 5.62e-07 | 3 |
branched duct epithelial cell | 5.62e-07 | 3 |
tracheal epithelial cell | 5.62e-07 | 3 |
tracheoblast | 5.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.52e-20 | 106 |
squamous cell carcinoma | 3.55e-14 | 14 |
cell type cancer | 9.62e-13 | 143 |
adenocarcinoma | 5.35e-12 | 25 |