FFCP PHASE1:Hg19::chr14:60975858..60975869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4990 | |EntrezGene=4990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |HGNC=10892 | ||
|TSSclassifier=strong | |||
|UniProt=O95475,Q6P051 | |UniProt=O95475,Q6P051 | ||
|association_with_transcript=-68bp_to_NM_007374,uc001xfa.3_5end | |association_with_transcript=-68bp_to_NM_007374,uc001xfa.3_5end | ||
|cluster_id=chr14:60975858..60975869,+ | |||
|coexpression_cluster_id=C1726 | |||
|description=CAGE_peak_2_at_SIX6_5end | |description=CAGE_peak_2_at_SIX6_5end | ||
|id=chr14:60975858..60975869,+ | |id=chr14:60975858..60975869,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.87e-23!5;CL:0000064!1.32e-15!3;CL:0005012!1.32e-15!3;CL:0000067!1.32e-15!3;CL:0002304!1.32e-15!3;CL:0000075!5.11e-13!27;CL:0000306!1.42e-11!4;CL:0002222!1.42e-11!4;CL:0002224!1.42e-11!4;CL:0000710!3.36e-08!20;CL:0000133!3.18e-07!59 | |ontology_enrichment_celltype=CL:0002322!6.87e-23!5;CL:0000064!1.32e-15!3;CL:0005012!1.32e-15!3;CL:0000067!1.32e-15!3;CL:0002304!1.32e-15!3;CL:0000075!5.11e-13!27;CL:0000306!1.42e-11!4;CL:0002222!1.42e-11!4;CL:0002224!1.42e-11!4;CL:0000710!3.36e-08!20;CL:0000133!3.18e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.65e-36;3!CL:0000067;2.65e-36;3!CL:0005012;2.65e-36;3!CL:0002304;2.65e-36;3!CL:0000075;6.04e-27;27!CL:0000306;8.39e-27;4!CL:0002222;8.39e-27;4!CL:0002224;8.39e-27;4!CL:0000710;1.02e-14;20!CL:0000342;9.73e-13;1!CL:0002565;9.73e-13;1!CL:0002321;1.28e-12;15!CL:0002322;2.84e-10;5!CL:0000333;3.50e-10;5!CL:0002077;3.03e-08;34!CL:0000147;5.18e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.65e-36,3;CL:0000067,2.65e-36,3;CL:0005012,2.65e-36,3;CL:0002304,2.65e-36,3;CL:0000075,6.04e-27,27;CL:0000306,8.39e-27,4;CL:0002222,8.39e-27,4;CL:0002224,8.39e-27,4;CL:0000710,1.02e-14,20;CL:0000342,8.64e-13,1;CL:0002565,8.64e-13,1;CL:0002322,2.84e-10,5;CL:0000133,8.41e-09,59;CL:0002077,1.26e-08,34;CL:0000147,5.06e-08,14;CL:0000221,3.85e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.48e-16;3!UBERON:0005425;9.73e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.24e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.31e-08,6 | |||
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|short_description=p2@SIX6 | |short_description=p2@SIX6 | ||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p2@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -68bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.65e-36 | 3 |
ciliated epithelial cell | 2.65e-36 | 3 |
multi-ciliated epithelial cell | 2.65e-36 | 3 |
non-pigmented ciliary epithelial cell | 2.65e-36 | 3 |
columnar/cuboidal epithelial cell | 6.04e-27 | 27 |
crystallin accumulating cell | 8.39e-27 | 4 |
vertebrate lens cell | 8.39e-27 | 4 |
lens epithelial cell | 8.39e-27 | 4 |
neurecto-epithelial cell | 1.02e-14 | 20 |
pigment cell (sensu Vertebrata) | 8.64e-13 | 1 |
iris pigment epithelial cell | 8.64e-13 | 1 |
embryonic stem cell | 2.84e-10 | 5 |
neurectodermal cell | 8.41e-09 | 59 |
ecto-epithelial cell | 1.26e-08 | 34 |
pigment cell | 5.06e-08 | 14 |
ectodermal cell | 3.85e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.31e-08 | 6 |