FFCP PHASE1:Hg19::chr17:42984061..42984071,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-190bp_to_U92979_5end | |||
|cluster_id=chr17:42984061..42984071,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_29_at_GFAP_5end | |||
|id=chr17:42984061..42984071,- | |||
|ontology_enrichment_celltype=CL:0000128!3.01e-12!7;CL:0000126!3.01e-12!7;CL:0000127!3.01e-12!7;CL:0002453!3.01e-12!7;CL:0002605!1.90e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.94e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.94e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.85e-22;3!UBERON:0003057;1.85e-22;3!UBERON:0006601;3.28e-11;82!UBERON:0006222;1.51e-08;1!UBERON:0005425;2.25e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p29@GFAP | |||
}} |
Latest revision as of 23:16, 24 September 2015
Short description: | p29@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -190bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.94e-10 | 3 |