FFCP PHASE1:Hg19::chr17:42984587..42984600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_BC012228_5end | |association_with_transcript=104bp_to_BC012228_5end | ||
|cluster_id=chr17:42984587..42984600,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_20_at_GFAP_5end | |description=CAGE_peak_20_at_GFAP_5end | ||
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|ontology_enrichment_celltype=CL:0002605!2.56e-10!3;CL:0000128!1.74e-07!7;CL:0000126!1.74e-07!7;CL:0000127!1.74e-07!7;CL:0002453!1.74e-07!7 | |ontology_enrichment_celltype=CL:0002605!2.56e-10!3;CL:0000128!1.74e-07!7;CL:0000126!1.74e-07!7;CL:0000127!1.74e-07!7;CL:0002453!1.74e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.80e-11;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.80e-11;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.05e-19;82!UBERON:0006241;1.04e-17;3!UBERON:0003057;1.04e-17;3!UBERON:0006215;4.48e-08;3!UBERON:0005425;4.21e-07;1 | |ontology_enrichment_development_v019=UBERON:0006601;7.05e-19;82!UBERON:0006241;1.04e-17;3!UBERON:0003057;1.04e-17;3!UBERON:0006215;4.48e-08;3!UBERON:0005425;4.21e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-127!57;UBERON:0005068!2.19e-127!57;UBERON:0006241!2.19e-127!57;UBERON:0007135!2.19e-127!57;UBERON:0001017!1.70e-113!82;UBERON:0005743!8.64e-108!86;UBERON:0002616!2.87e-106!59;UBERON:0000955!1.62e-101!69;UBERON:0006238!1.62e-101!69;UBERON:0000073!8.61e-101!94;UBERON:0001016!8.61e-101!94;UBERON:0002780!5.01e-92!41;UBERON:0001890!5.01e-92!41;UBERON:0006240!5.01e-92!41;UBERON:0003080!1.14e-89!42;UBERON:0003075!8.37e-85!86;UBERON:0007284!8.37e-85!86;UBERON:0002020!3.45e-82!34;UBERON:0003528!3.45e-82!34;UBERON:0001893!1.62e-81!34;UBERON:0002346!1.45e-80!90;UBERON:0002791!9.17e-79!33;UBERON:0001869!3.05e-75!32;UBERON:0007023!1.31e-61!115;UBERON:0003056!2.56e-59!61;UBERON:0000033!2.74e-55!123;UBERON:0000956!1.38e-54!25;UBERON:0000203!1.38e-54!25;UBERON:0000153!3.19e-52!129;UBERON:0007811!3.19e-52!129;UBERON:0004121!1.60e-51!169;UBERON:0000924!4.51e-50!173;UBERON:0006601!4.51e-50!173;UBERON:0002619!4.87e-46!22;UBERON:0001950!5.18e-40!20;UBERON:0003076!1.17e-36!15;UBERON:0003057!1.17e-36!15;UBERON:0000025!2.85e-31!194;UBERON:0004732!4.08e-30!13;UBERON:0002308!4.96e-29!9;UBERON:0000125!4.96e-29!9;UBERON:0002420!1.52e-28!9;UBERON:0007245!1.52e-28!9;UBERON:0010009!1.52e-28!9;UBERON:0010011!1.52e-28!9;UBERON:0000454!1.52e-28!9;UBERON:0004733!7.62e-27!12;UBERON:0002028!7.62e-27!12;UBERON:0007277!7.62e-27!12;UBERON:0004111!6.19e-23!241;UBERON:0009663!1.40e-22!7;UBERON:0002298!8.01e-21!8;UBERON:0000477!1.33e-18!286;UBERON:0002680!1.88e-17!9;UBERON:0001895!1.88e-17!9;UBERON:0010092!1.88e-17!9;UBERON:0002021!1.31e-16!5;UBERON:0000349!1.59e-16!5;UBERON:0000483!2.51e-16!309;UBERON:0000119!4.66e-16!312;UBERON:0000064!3.28e-15!219;UBERON:0000475!1.23e-14!365;UBERON:0001871!5.36e-14!7;UBERON:0000369!4.97e-13!4;UBERON:0002435!4.97e-13!4;UBERON:0000204!4.97e-13!4;UBERON:0010082!4.97e-13!4;UBERON:0000200!9.89e-13!6;UBERON:0001894!6.96e-12!7;UBERON:0006222!6.96e-12!7;UBERON:0002240!7.61e-12!3;UBERON:0001896!1.20e-11!3;UBERON:0005290!1.20e-11!3;UBERON:0010096!1.20e-11!3;UBERON:0006331!2.84e-11!3;UBERON:0000988!5.79e-11!3;UBERON:0005383!2.04e-10!3;UBERON:0005382!2.04e-10!3;UBERON:0001872!3.20e-10!5;UBERON:0002771!5.37e-10!3;UBERON:0002037!5.07e-09!6;UBERON:0006215!5.07e-09!6;UBERON:0000062!3.25e-08!511;UBERON:0001875!3.38e-08!2;UBERON:0006514!3.38e-08!2;UBERON:0002148!3.62e-08!2;UBERON:0005162!3.62e-08!2;UBERON:0000122!3.62e-08!2;UBERON:0009662!3.62e-08!2;UBERON:0001897!3.75e-08!2;UBERON:0001954!6.07e-08!2;UBERON:0003022!6.07e-08!2;UBERON:0002421!6.07e-08!2;UBERON:0002600!6.07e-08!2;UBERON:0001873!1.08e-07!2;UBERON:0010122!1.08e-07!2;UBERON:0001876!1.15e-07!2;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0005174!3.08e-07!5;UBERON:0001137!3.08e-07!5;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0001905!3.40e-07!2;UBERON:0002757!3.40e-07!2;UBERON:0010134!3.40e-07!2;UBERON:0002784!3.40e-07!2;UBERON:0005408!3.40e-07!2;UBERON:0001899!3.40e-07!2;UBERON:0000467!3.58e-07!625;UBERON:0000480!3.85e-07!626;UBERON:0000922!5.42e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!2.19e-127!57;UBERON:0005068!2.19e-127!57;UBERON:0006241!2.19e-127!57;UBERON:0007135!2.19e-127!57;UBERON:0001017!1.70e-113!82;UBERON:0005743!8.64e-108!86;UBERON:0002616!2.87e-106!59;UBERON:0000955!1.62e-101!69;UBERON:0006238!1.62e-101!69;UBERON:0000073!8.61e-101!94;UBERON:0001016!8.61e-101!94;UBERON:0002780!5.01e-92!41;UBERON:0001890!5.01e-92!41;UBERON:0006240!5.01e-92!41;UBERON:0003080!1.14e-89!42;UBERON:0003075!8.37e-85!86;UBERON:0007284!8.37e-85!86;UBERON:0002020!3.45e-82!34;UBERON:0003528!3.45e-82!34;UBERON:0001893!1.62e-81!34;UBERON:0002346!1.45e-80!90;UBERON:0002791!9.17e-79!33;UBERON:0001869!3.05e-75!32;UBERON:0007023!1.31e-61!115;UBERON:0003056!2.56e-59!61;UBERON:0000033!2.74e-55!123;UBERON:0000956!1.38e-54!25;UBERON:0000203!1.38e-54!25;UBERON:0000153!3.19e-52!129;UBERON:0007811!3.19e-52!129;UBERON:0004121!1.60e-51!169;UBERON:0000924!4.51e-50!173;UBERON:0006601!4.51e-50!173;UBERON:0002619!4.87e-46!22;UBERON:0001950!5.18e-40!20;UBERON:0003076!1.17e-36!15;UBERON:0003057!1.17e-36!15;UBERON:0000025!2.85e-31!194;UBERON:0004732!4.08e-30!13;UBERON:0002308!4.96e-29!9;UBERON:0000125!4.96e-29!9;UBERON:0002420!1.52e-28!9;UBERON:0007245!1.52e-28!9;UBERON:0010009!1.52e-28!9;UBERON:0010011!1.52e-28!9;UBERON:0000454!1.52e-28!9;UBERON:0004733!7.62e-27!12;UBERON:0002028!7.62e-27!12;UBERON:0007277!7.62e-27!12;UBERON:0004111!6.19e-23!241;UBERON:0009663!1.40e-22!7;UBERON:0002298!8.01e-21!8;UBERON:0000477!1.33e-18!286;UBERON:0002680!1.88e-17!9;UBERON:0001895!1.88e-17!9;UBERON:0010092!1.88e-17!9;UBERON:0002021!1.31e-16!5;UBERON:0000349!1.59e-16!5;UBERON:0000483!2.51e-16!309;UBERON:0000119!4.66e-16!312;UBERON:0000064!3.28e-15!219;UBERON:0000475!1.23e-14!365;UBERON:0001871!5.36e-14!7;UBERON:0000369!4.97e-13!4;UBERON:0002435!4.97e-13!4;UBERON:0000204!4.97e-13!4;UBERON:0010082!4.97e-13!4;UBERON:0000200!9.89e-13!6;UBERON:0001894!6.96e-12!7;UBERON:0006222!6.96e-12!7;UBERON:0002240!7.61e-12!3;UBERON:0001896!1.20e-11!3;UBERON:0005290!1.20e-11!3;UBERON:0010096!1.20e-11!3;UBERON:0006331!2.84e-11!3;UBERON:0000988!5.79e-11!3;UBERON:0005383!2.04e-10!3;UBERON:0005382!2.04e-10!3;UBERON:0001872!3.20e-10!5;UBERON:0002771!5.37e-10!3;UBERON:0002037!5.07e-09!6;UBERON:0006215!5.07e-09!6;UBERON:0000062!3.25e-08!511;UBERON:0001875!3.38e-08!2;UBERON:0006514!3.38e-08!2;UBERON:0002148!3.62e-08!2;UBERON:0005162!3.62e-08!2;UBERON:0000122!3.62e-08!2;UBERON:0009662!3.62e-08!2;UBERON:0001897!3.75e-08!2;UBERON:0001954!6.07e-08!2;UBERON:0003022!6.07e-08!2;UBERON:0002421!6.07e-08!2;UBERON:0002600!6.07e-08!2;UBERON:0001873!1.08e-07!2;UBERON:0010122!1.08e-07!2;UBERON:0001876!1.15e-07!2;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0005174!3.08e-07!5;UBERON:0001137!3.08e-07!5;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0001905!3.40e-07!2;UBERON:0002757!3.40e-07!2;UBERON:0010134!3.40e-07!2;UBERON:0002784!3.40e-07!2;UBERON:0005408!3.40e-07!2;UBERON:0001899!3.40e-07!2;UBERON:0000467!3.58e-07!625;UBERON:0000480!3.85e-07!626;UBERON:0000922!5.42e-07!612 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|short_description=p20@GFAP | |short_description=p20@GFAP | ||
}} | }} |
Latest revision as of 23:27, 24 September 2015
Short description: | p20@GFAP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 104bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data