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{{f5samples
{{f5samples
|id=FF:10176-103C5
|DRA_sample_Accession=CAGE@SAMD00005287
|name=putamen, adult, donor10196
|accession_numbers=CAGE;DRX008714;DRR009586;DRZ001011;DRZ002396;DRZ012361;DRZ013746
|sample_id=10176
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001874,UBERON:0000369,UBERON:0002435,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009663,UBERON:0002420,UBERON:0002616,UBERON:0002780,UBERON:0000125,UBERON:0002020,UBERON:0007245,UBERON:0010317,UBERON:0002308,UBERON:0010009,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0005383,UBERON:0010011,UBERON:0000204,UBERON:0005382,UBERON:0000454
|rna_tube_id=103C5
|rna_box=103
|rna_position=C5
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=putamen
|sample_donor(cell lot)=donor: 10196
|sample_sex=female
|sample_age=60
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.27
|rna_od260/280=2.06
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=Peter Heutink
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=41.274
|rna_concentration=0.55032
|sample_note=
|profile_hcage=CNhs12324,LSID913,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000125,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001874,UBERON:0001890,UBERON:0001893,UBERON:0002020,UBERON:0002050,UBERON:0002308,UBERON:0002346,UBERON:0002420,UBERON:0002435,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003528,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005382,UBERON:0005383,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010087
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.74!544.88!PEG3;;chr7:100065686..100065701,-!p2@TSC22D4!2.41!255.94!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.09!123.02!OLIG1;;chr9:114287433..114287513,+!p1@ZNF483!2.01!251.07!ZNF483;;chr3:181429704..181429722,+!p1@SOX2!1.89!77.14!SOX2;;chr22:38380543..38380569,-!p1@SOX10!1.88!74.47!SOX10;;chr15:80735246..80735321,+!p3@ARNT2!1.88!74.16!ARNT2;;chr2:166326200..166326216,+!p1@CSRNP3!1.86!101.97!CSRNP3;;chrX:85969626..85969664,+!p1@DACH2!1.77!57.66!DACH2;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.76!56.88!SMARCE1;;chr15:80733570..80733659,+!p2@ARNT2!1.76!56.56!ARNT2;;chrX:82763292..82763317,+!p1@POU3F4!1.75!55.15!POU3F4;;chr17:53342311..53342400,+!p1@HLF!1.70!56.40!HLF;;chr2:2334997..2335053,-!p1@MYT1L!1.70!49.18!MYT1L;;chr14:29234581..29234601,+!p2@FOXG1!1.68!46.98!FOXG1;;chr14:29235961..29236008,+!p1@FOXG1!1.68!46.98!FOXG1;;chr3:181429741..181429767,+!p2@SOX2!1.64!42.26!SOX2;;chr9:77112244..77112262,+!p1@RORB!1.60!42.89!RORB;;chr2:60781201..60781258,-!p3@BCL11A!1.59!38.34!BCL11A;;chr19:57352109..57352153,-!p2@ZIM2!1.55!34.88!ZIM2;;chr11:61520075..61520136,+!p1@C11orf9!1.54!70.07!C11orf9;;chr7:63505799..63505904,+!p1@ZNF727!1.53!32.99!ZNF727;;chr8:40755333..40755352,-!p1@ZMAT4!1.52!31.74!ZMAT4;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.51!31.58!POU3F3;;chr12:106976774..106976788,+!p1@RFX4!1.50!30.32!RFX4;;chr19:38085768..38085821,+!p1@ZNF540!1.48!43.68!ZNF540;;chr21:34442540..34442560,+!p2@OLIG1!1.47!28.60!OLIG1;;chr2:145277882..145277967,-!p3@ZEB2!1.46!47.76!ZEB2;;chr21:34398234..34398250,+!p1@OLIG2!1.46!28.12!OLIG2;;chr12:106976678..106976708,+!p2@RFX4!1.45!27.34!RFX4;;chr16:1031762..1031781,+!p1@SOX8!1.45!27.02!SOX8;;chr8:53322304..53322340,-!p1@ST18!1.45!26.87!ST18;;chr14:33403881..33403924,+!p1@NPAS3!1.43!25.77!NPAS3;;chr17:38219209..38219230,+!p1@THRA!1.42!316.75!THRA;;chr12:26277817..26277863,-!p2@BHLHE41!1.41!33.31!BHLHE41;;chr2:45168875..45168916,+!p1@SIX3!1.41!24.82!SIX3;;chr12:54779511..54779577,-!p5@ZNF385A!1.40!23.88!ZNF385A;;chr11:113930425..113930471,+!p1@ZBTB16!1.39!33.78!ZBTB16;;chr14:29236269..29236285,+!p3@FOXG1!1.39!23.57!FOXG1;;chr19:46801639..46801699,+!p1@HIF3A!1.38!23.10!HIF3A;;chr1:2461692..2461710,-!p1@HES5!1.38!22.94!HES5;;chr14:58797974..58798011,+!p3@ARID4A!1.36!21.68!ARID4A;;chr10:48355030..48355090,+!p1@ZNF488!1.35!27.34!ZNF488;;chr10:134599649..134599653,-!p1@NKX6-2!1.35!21.37!NKX6-2;;chr10:119302232..119302265,+!p1@EMX2!1.35!21.21!EMX2;;chr9:126774018..126774055,+!p1@LHX2!1.34!21.05!LHX2;;chr17:70117153..70117174,+!p1@SOX9!1.33!203.78!SOX9;;chrX:25034067..25034088,-!p1@ARX!1.33!20.27!ARX;;chr10:118897911..118897974,-!p1@VAX1!1.32!19.80!VAX1;;chr19:46800289..46800327,+!p2@HIF3A!1.31!19.48!HIF3A;;chr10:64134120..64134183,+!p1@ZNF365!1.30!22.62!ZNF365;;chr2:73520667..73520683,-!p1@EGR4!1.29!18.54!EGR4;;chr15:80696703..80696754,+!p1@ARNT2!1.28!24.20!ARNT2;;chr18:55102598..55102623,+!p1@ONECUT2!1.28!17.91!ONECUT2;;chr8:53322347..53322378,-!p2@ST18!1.27!17.60!ST18;;chr3:141105235..141105307,+!p7@ZBTB38!1.26!17.28!ZBTB38;;chr4:57522166..57522260,-!p2@HOPX!1.25!19.17!HOPX;;chr6:19837592..19837621,+!p1@ID4!1.24!98.51!ID4;;chr1:40105299..40105326,-!p1@HEYL!1.24!16.18!HEYL;;chr12:26277956..26277980,-!p1@BHLHE41!1.23!56.56!BHLHE41;;chr15:31658288..31658338,+!p4@KLF13!1.23!16.03!KLF13;;chr7:150974206..150974255,-!p1@SMARCD3!1.22!95.37!SMARCD3;;chr19:38720294..38720348,-!p1@DPF1!1.22!19.48!DPF1;;chr2:2328299..2328363,-!p3@MYT1L!1.22!15.55!MYT1L;;chr8:22550530..22550609,-!p2@EGR3!1.21!15.24!EGR3;;chrX:82763265..82763283,+!p2@POU3F4!1.21!15.24!POU3F4;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.20!31.42!ZNF395;;chr17:7492684..7492778,-!p2@SOX15!1.20!30.95!SOX15;;chr2:45168997..45169020,+!p4@SIX3!1.20!14.93!SIX3;;chr2:95963052..95963106,+!p1@KCNIP3!1.20!14.77!KCNIP3;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.19!14.61!POU3F3;;chr22:41763274..41763318,+!p3@TEF!1.19!14.45!TEF;;chr7:96654133..96654150,-!p1@DLX5!1.19!14.45!DLX5;;chr1:61548069..61548102,+!p3@NFIA!1.18!33.78!NFIA;;chr3:25469724..25469773,+!p1@RARB!1.18!20.58!RARB;;chr2:2328095..2328125,-!p7@MYT1L!1.17!13.83!MYT1L;;chr15:37391271..37391376,-!p5@MEIS2!1.15!24.20!MEIS2;;chr2:192015750..192015793,-!p2@STAT4!1.15!17.60!STAT4;;chr2:45168834..45168847,+!p2@SIX3!1.15!13.20!SIX3;;chr11:31832862..31832884,-!p2@PAX6!1.14!12.88!PAX6;;chr19:38042240..38042309,+!p2@ZNF540!1.13!18.85!ZNF540;;chr13:72441315..72441454,-!p1@DACH1!1.12!24.20!DACH1;;chr20:62680984..62680999,-!p1@SOX18!1.12!16.18!SOX18;;chr8:93074803..93074845,-!p1@RUNX1T1!1.12!12.26!RUNX1T1;;chr11:31832658..31832681,-!p1@PAX6!1.12!12.26!PAX6;;chr7:96635178..96635181,+!p1@DLX6!1.12!12.10!DLX6;;chr17:38219143..38219154,+!p2@THRA!1.11!42.42!THRA;;chr3:147127142..147127168,+!p1@ZIC1!1.11!11.78!ZIC1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.11!11.78!ZBED1;;chr3:126076242..126076257,-!p1@KLF15!1.10!14.45!KLF15;;chr2:2330039..2330072,-!p6@MYT1L!1.09!11.31!MYT1L;;chr2:45168959..45168990,+!p6@SIX3!1.09!11.31!SIX3;;chr15:37392534..37392562,-!p10@MEIS2!1.08!12.10!MEIS2;;chr9:126774058..126774081,+!p3@LHX2!1.08!11.16!LHX2;;chr1:165414325..165414369,-!p1@RXRG!1.08!11.00!RXRG;;chr17:38219184..38219195,+!p3@THRA!1.07!21.52!THRA;;chr14:33403648..33403710,+!p3@NPAS3!1.07!10.84!NPAS3;;chr11:125034640..125034655,+!p1@PKNOX2!1.06!10.53!PKNOX2;;chr10:31610110..31610159,+!p2@ZEB1!1.06!10.37!ZEB1;;chr8:80679993..80680011,-!p1@HEY1!1.05!14.77!HEY1;;chr11:8102846..8102892,+!p1@TUB!1.05!14.30!TUB;;chr19:49139477..49139552,-!p4@DBP!1.05!13.04!DBP;;chr1:8585945..8586056,-!p3@RERE!1.04!34.09!RERE;;chr3:114819124..114819200,-!p3@ZBTB20!1.04!23.57!ZBTB20;;chr15:61521417..61521460,-!p2@RORA!1.04!22.62!RORA;;chr19:58545454..58545498,+!p1@ZSCAN1!1.04!9.90!ZSCAN1;;chr19:20748574..20748599,-!p1@ZNF737!1.03!58.92!ZNF737;;chr3:33482052..33482116,-!p2@UBP1!1.03!15.24!UBP1;;chr3:126076264..126076305,-!p2@KLF15!1.03!13.83!KLF15;;chr2:45169193..45169219,+!p3@SIX3!1.03!9.74!SIX3;;chr15:80696666..80696700,+!p4@ARNT2!1.03!9.74!ARNT2;;chr7:64023410..64023428,-!p2@ZNF680!1.02!14.93!ZNF680;;chr1:38512457..38512474,-!p1@POU3F1!1.02!10.53!POU3F1;;chr8:30890810..30890880,-!p1@PURG!1.02!9.58!PURG;;chr3:147127177..147127194,+!p2@ZIC1!1.02!9.58!ZIC1;;chr11:47400078..47400106,-!p1@SPI1!1.02!9.58!SPI1;;chr16:30418387..30418422,+!p4@ZNF771!1.02!9.43!ZNF771;;chr1:151032860..151032918,+!p1@MLLT11!1.01!111.55!MLLT11;;chr2:60780607..60780624,-!p2@BCL11A!1.01!28.60!BCL11A;;chr10:38265517..38265591,-!p1@ZNF25!1.00!35.98!ZNF25;;chr3:114173720..114173794,-!p6@ZBTB20!1.00!9.11!ZBTB20;;chr16:67197654..67197716,+!p3@HSF4!1.00!9.11!HSF4;;chr18:55102628..55102646,+!p2@ONECUT2!0.99!8.80!ONECUT2;;chr3:25469815..25469866,+!p3@RARB!0.99!8.80!RARB;;chr10:64133862..64133884,+!p4@ZNF365!0.99!8.80!ZNF365;;chr11:85393886..85393913,-!p3@CREBZF!0.98!8.64!CREBZF;;chr2:2335070..2335098,-!p4@MYT1L!0.98!8.64!MYT1L;;chr4:57547454..57547469,-!p1@HOPX!0.98!8.48!HOPX;;chr1:8585919..8585943,-!p18@RERE!0.98!8.48!RERE;;chr8:22550982..22550999,-!p1@EGR3!0.97!23.88!EGR3;;chr7:28220631..28220649,-!p6@JAZF1!0.97!8.33!JAZF1;;chr14:58798013..58798071,+!p2@ARID4A!0.97!8.33!ARID4A;;chr9:3525867..3525902,-!p3@RFX3!0.96!28.91!RFX3;;chr14:21994337..21994442,-!p1@SALL2!0.96!22.78!SALL2;;chr1:164528340..164528379,+!p4@PBX1!0.96!20.74!PBX1;;chr7:96635448..96635470,+!p5@DLX6!0.96!8.17!DLX6;;chr13:72441074..72441172,-!p2@DACH1!0.96!8.17!DACH1;;chr3:21792682..21792720,-!p1@ZNF385D!0.96!8.17!ZNF385D;;chr22:41777927..41777971,+!p1@TEF!0.95!68.82!TEF;;chr7:64023441..64023462,-!p1@ZNF680!0.95!64.42!ZNF680;;chr4:206390..206444,+!p1@ZNF876P!0.95!14.45!ZNF876P;;chr2:113057415..113057477,+!p3@ZC3H6!0.95!10.37!ZC3H6;;chr8:93074848..93074871,-!p3@RUNX1T1!0.95!8.01!RUNX1T1;;chr8:30891078..30891128,-!p2@PURG!0.95!7.86!PURG;;chr15:80696410..80696477,+!p6@ARNT2!0.95!7.86!ARNT2;;chr19:22193731..22193751,-!p1@ZNF208!0.95!7.86!ZNF208;;chr9:115818951..115819011,-!p1@ZFP37!0.94!24.67!ZFP37;;chr6:126070769..126070801,+!p1@HEY2!0.94!8.96!HEY2;;chr6:108487289..108487302,+!p1@NR2E1!0.94!7.70!NR2E1;;chr2:45169143..45169167,+!p5@SIX3!0.94!7.70!SIX3;;chr19:56988677..56988729,-!p1@ZNF667!0.93!13.51!ZNF667;;chr19:57019215..57019250,+!p1@ZNF471!0.93!11.47!ZNF471;;chr2:45168856..45168867,+!p7@SIX3!0.93!7.54!SIX3;;chr19:13135386..13135435,+!p4@NFIX!0.93!7.54!NFIX;;chr5:138629628..138629688,+!p2@MATR3!0.92!182.41!MATR3;;chr19:53193731..53193767,-!p1@ZNF83!0.92!67.72!ZNF83;;chr19:21512202..21512225,-!p1@ZNF708!0.92!39.12!ZNF708;;chrX:101186981..101187030,-!p1@ZMAT1!0.92!24.98!ZMAT1;;chr5:178368186..178368238,+!p1@ZNF454!0.92!13.51!ZNF454;;chr1:214161272..214161322,+!p1@PROX1!0.92!10.37!PROX1;;chr14:33408072..33408114,+!p2@NPAS3!0.92!8.80!NPAS3;;chrX:118739835..118739862,-!p1@NKRF!0.92!8.01!NKRF;;chr3:114819101..114819121,-!p7@ZBTB20!0.92!7.38!ZBTB20;;chr19:53636125..53636178,-!p1@ZNF415!0.91!20.90!ZNF415;;chr18:6414884..6414942,-!p1@L3MBTL4!0.91!9.11!L3MBTL4;;chr15:37390374..37390422,-!p9@MEIS2!0.91!8.96!MEIS2;;chr6:126112039..126112062,+!p8@NCOA7!0.91!8.80!NCOA7;;chr7:96634878..96634900,+!p2@DLX6!0.91!7.07!DLX6;;chr11:125034605..125034636,+!p2@PKNOX2!0.91!7.07!PKNOX2;;chr2:45169684..45169715,+!p9@SIX3!0.91!7.07!SIX3;;chr13:45010939..45011033,-!p1@TSC22D1!0.90!478.89!TSC22D1;;chr19:49140609..49140643,-!p1@DBP!0.90!41.01!DBP;;chr19:37096139..37096170,-!p2@ZNF529!0.90!20.27!ZNF529;;chr19:38183208..38183225,-!p1@ZNF781!0.90!8.96!ZNF781;;chr5:139487363..139487444,+!p1@PURA!0.89!54.52!PURA;;chr20:3388541..3388575,-!p2@C20orf194!0.89!27.97!C20orf194;;chr21:34442584..34442587,+!p3@OLIG1!0.89!6.76!OLIG1;;chr7:64254793..64254813,+!p1@ZNF138!0.88!80.13!ZNF138;;chr9:3525910..3525955,-!p4@RFX3!0.88!20.58!RFX3;;chr9:3525727..3525828,-!p2@RFX3!0.88!17.75!RFX3;;chr2:42721689..42721723,+!p6@MTA3!0.88!6.60!MTA3;;chr3:147111231..147111281,+!p3@ZIC1!0.88!6.60!ZIC1;;chr9:14314131..14314147,-!p2@NFIB!0.87!37.55!NFIB;;chr11:31839488..31839515,-!p3@PAX6!0.87!6.44!PAX6;;chrX:106959661..106959763,-!p4@TSC22D3!0.86!19.01!TSC22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AP4;;chr3:71007770..71007789,-!p9@FOXP1!0.41!5.50!FOXP1;;chr7:102985288..102985310,-!p2@DNAJC2!0.41!4.87!DNAJC2;;chr9:102584159..102584174,+!p2@NR4A3!0.41!3.46!NR4A3;;chr13:37494365..37494381,-!p1@SMAD9!0.41!3.30!SMAD9;;chr19:35417798..35417842,+!p1@ZNF30!0.41!3.14!ZNF30;;chr2:145282041..145282092,-!p8@ZEB2!0.41!2.83!ZEB2;;chrX:83757493..83757508,-!p2@HDX!0.41!2.51!HDX;;chr19:13136130..13136165,+!p6@NFIX!0.41!2.36!NFIX;;chr19:24216201..24216212,+!p4@ZNF254!0.41!2.36!ZNF254;;chr8:71315585..71315605,-!p8@NCOA2!0.41!2.20!NCOA2;;chr19:20844356..20844365,-!p3@ZNF626!0.41!1.89!ZNF626;;chr1:61548118..61548129,+!p9@NFIA!0.41!1.89!NFIA;;chr19:38714847..38714878,-!p3@DPF1!0.41!1.57!DPF1;;chr19:49140645..49140654,-!p6@DBP!0.41!1.57!DBP;;chr1:167298384..167298412,+!p3@POU2F1!0.41!1.57!POU2F1;;chr1:212873200..212873230,-!p5@BATF3!0.41!1.57!BATF3;;chr1:2985726..2985752,+!p2@PRDM16!0.41!1.57!PRDM16;;chr1:42801540..42801562,-!p4@FOXJ3!0.41!1.57!FOXJ3;;chr15:77197723..77197734,-!p4@SCAPER!0.41!1.57!SCAPER;;chr18:55102806..55102847,+!p3@ONECUT2!0.41!1.57!ONECUT2;;chr5:3595961..3595975,+!p3@IRX1!0.41!1.57!IRX1;;chr6:108487220..108487236,+!p2@NR2E1!0.41!1.57!NR2E1;;chr6:126111875..126111886,+!p10@NCOA7!0.41!1.57!NCOA7;;chr7:14026022..14026044,-!p7@ETV1!0.41!1.57!ETV1;;chr8:71157595..71157616,-!p13@NCOA2!0.41!1.57!NCOA2;;chr8:93115584..93115642,-!p5@RUNX1T1!0.41!1.57!RUNX1T1;;chr10:111985777..111985788,+!p4@MXI1!0.41!1.57!MXI1;;chr10:119307702..119307723,+!p10@EMX2!0.41!1.57!EMX2;;chr10:63661053..63661079,+!p14@ARID5B!0.41!1.57!ARID5B;;chr11:31839453..31839462,-!p9@PAX6!0.41!1.57!PAX6;;chr12:106976837..106976850,+!p5@RFX4!0.41!1.57!RFX4;;chr12:51611583..51611612,-!p4@POU6F1!0.41!1.57!POU6F1;;chr2:100721310..100721325,-!p7@AFF3!0.41!1.57!AFF3;;chr2:145188568..145188590,-!p27@ZEB2!0.41!1.57!ZEB2;;chr2:180726291..180726311,-!p1@ZNF385B!0.41!1.57!ZNF385B;;chr3:147111418..147111430,+!p14@ZIC1!0.41!1.57!ZIC1;;chr3:71631248..71631268,-!p26@FOXP1!0.41!1.57!FOXP1;;chr7:135194822..135194860,-!p1@CNOT4!0.40!60.33!CNOT4;;chr10:111967345..111967422,+!p1@MXI1!0.40!36.61!MXI1;;chr4:26322419..26322479,+!p2@RBPJ!0.40!27.50!RBPJ;;chr9:2015335..2015370,+!p1@SMARCA2!0.40!27.34!SMARCA2;;chr2:145275162..145275202,-!p2@ZEB2!0.40!12.88!ZEB2;;chr19:22018966..22019001,-!p1@ZNF43!0.40!12.57!ZNF43;;chr19:38146320..38146401,-!p1@ZFP30!0.40!11.94!ZFP30;;chr15:57210961..57211012,+!p3@TCF12!0.40!6.60!TCF12;;chr6:41040923..41040952,+!p2@NFYA!0.40!5.34!NFYA;;chr4:146402925..146402957,+!p4@SMAD1!0.40!4.56!SMAD1;;chr12:56753939..56753951,-!p2@STAT2!0.40!4.09!STAT2;;chr8:116681150..116681164,-!p5@TRPS1!0.40!3.77!TRPS1;;chr3:178789622..178789633,-!p3@ZMAT3!0.40!3.61!ZMAT3;;chr1:59165763..59165780,-!p2@MYSM1!0.40!3.46!MYSM1;;chr6:15246217..15246228,+!p3@JARID2!0.40!3.30!JARID2;;chr1:164528911..164528940,+!p7@PBX1!0.40!2.67!PBX1;;chr9:127533582..127533615,-!p1@NR6A1!0.40!2.67!NR6A1;;chr3:14990132..14990175,+!p5@NR2C2!0.40!2.20!NR2C2;;chr3:44626359..44626387,+!p4@ZNF197!0.40!2.20!ZNF197;;chr19:37407411..37407451,+!p3@ZNF568!0.40!2.20!ZNF568;;chr12:51611694..51611719,-!p2@POU6F1!0.40!2.04!POU6F1;;chr5:140080022..140080042,+!p1@ZMAT2!0.39!120.04!ZMAT2;;chr5:176449684..176449722,+!p1@ZNF346!0.39!42.42!ZNF346;;chr21:43430440..43430485,-!p1@ZNF295!0.39!30.64!ZNF295;;chr9:129567282..129567353,+!p1@ZBTB43!0.39!28.75!ZBTB43;;chr19:53141584..53141625,-!p2@ZNF83!0.39!16.97!ZNF83;;chr19:56879653..56879743,+!p1@ZNF542!0.39!15.87!ZNF542;;chr17:16472486..16472533,-!p1@ZNF287!0.39!10.37!ZNF287;;chr9:99616768..99616819,-!p1@ZNF782!0.39!9.74!ZNF782;;chr3:71007344..71007348,-!p6@FOXP1!0.39!8.33!FOXP1;;chr19:11071652..11071682,+!p3@SMARCA4!0.39!7.07!SMARCA4;;chr18:74534479..74534551,+!p1@ZNF236!0.39!6.13!ZNF236;;chr19:44809143..44809187,-!p1@ZNF235!0.39!6.13!ZNF235;;chr11:7041554..7041602,-!p1@ZNF214!0.39!3.61!ZNF214;;chr9:14314106..14314119,-!p5@NFIB!0.39!3.30!NFIB;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000454;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001874;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002308;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002435;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005382;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009663
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
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|rna_box=103
|rna_catalog_number=
|rna_concentration=0.55032
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.27
|rna_od260/280=2.06
|rna_position=C5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=103C5
|rna_weight_ug=41.274
|sample_age=60
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=Peter Heutink
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor: 10196
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.16848991943738e-269!GO:0005737;cytoplasm;2.68558737328858e-155!GO:0043226;organelle;1.48541352843029e-106!GO:0043229;intracellular organelle;4.9443040149375e-106!GO:0044444;cytoplasmic part;4.56288401080128e-104!GO:0043227;membrane-bound organelle;1.85628921216829e-100!GO:0043231;intracellular membrane-bound organelle;3.22140554062796e-100!GO:0044422;organelle part;2.81614410064999e-70!GO:0044446;intracellular organelle part;3.14069188243608e-69!GO:0032991;macromolecular complex;6.21297264258485e-65!GO:0005515;protein binding;2.55350761465647e-63!GO:0016043;cellular component organization and biogenesis;5.25158386467425e-47!GO:0005739;mitochondrion;5.29876933717453e-47!GO:0030529;ribonucleoprotein complex;7.69840481665744e-47!GO:0003723;RNA binding;6.50419619937456e-43!GO:0031090;organelle membrane;1.42186470173196e-37!GO:0033036;macromolecule localization;3.72309056336231e-37!GO:0015031;protein transport;8.71408801679368e-37!GO:0043234;protein complex;4.47809792129616e-35!GO:0044429;mitochondrial part;8.34077447044285e-35!GO:0043233;organelle lumen;4.39390066557411e-34!GO:0031974;membrane-enclosed lumen;4.39390066557411e-34!GO:0008104;protein localization;1.30867564791877e-33!GO:0045184;establishment of protein localization;2.49606592174409e-33!GO:0044428;nuclear part;4.70677274418766e-32!GO:0046907;intracellular transport;3.43745090368116e-31!GO:0044238;primary metabolic process;2.22113753253224e-29!GO:0044237;cellular metabolic process;2.41020814738831e-28!GO:0051649;establishment of cellular localization;5.05255050341122e-28!GO:0031975;envelope;6.2528772663595e-28!GO:0031967;organelle envelope;8.95192320152142e-28!GO:0051641;cellular localization;1.36728919721054e-27!GO:0043170;macromolecule metabolic process;4.01957999887488e-27!GO:0016071;mRNA metabolic process;4.09085672433203e-27!GO:0006396;RNA processing;1.02018810891807e-26!GO:0005840;ribosome;1.54030694993135e-26!GO:0005829;cytosol;1.65897915931246e-26!GO:0005634;nucleus;1.45189057097195e-25!GO:0008380;RNA splicing;5.72827081109613e-25!GO:0019538;protein metabolic process;6.19591525006347e-25!GO:0016192;vesicle-mediated transport;1.44894550543559e-24!GO:0005740;mitochondrial envelope;7.61066203111767e-24!GO:0031966;mitochondrial membrane;1.41718446279883e-23!GO:0006119;oxidative phosphorylation;6.04586741428527e-23!GO:0006886;intracellular protein transport;4.11858635998525e-22!GO:0044260;cellular macromolecule metabolic process;5.85618910720715e-22!GO:0006397;mRNA processing;5.94132063849437e-22!GO:0003735;structural constituent of ribosome;1.0646750395479e-21!GO:0044267;cellular protein metabolic process;2.45258761511829e-21!GO:0019866;organelle inner membrane;4.84429382560486e-21!GO:0006412;translation;8.72145160437939e-21!GO:0005743;mitochondrial inner membrane;1.35771200112772e-20!GO:0006996;organelle organization and biogenesis;3.06460096014093e-20!GO:0005794;Golgi apparatus;2.11618795866344e-19!GO:0031981;nuclear lumen;2.27789940442041e-19!GO:0044455;mitochondrial membrane part;1.63401497743063e-18!GO:0000166;nucleotide binding;5.09482464567063e-18!GO:0033279;ribosomal subunit;5.09482464567063e-18!GO:0065003;macromolecular complex assembly;9.6528534493602e-18!GO:0005681;spliceosome;2.45430422303365e-17!GO:0005746;mitochondrial respiratory chain;1.37837801997456e-16!GO:0006512;ubiquitin cycle;2.09746000933165e-16!GO:0009058;biosynthetic process;3.28316530507852e-16!GO:0043283;biopolymer metabolic process;3.46544616365897e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.77605599883048e-16!GO:0044249;cellular biosynthetic process;8.5488056250455e-16!GO:0050136;NADH dehydrogenase (quinone) activity;9.53715242251728e-16!GO:0003954;NADH dehydrogenase activity;9.53715242251728e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.53715242251728e-16!GO:0022607;cellular component assembly;1.5943886542674e-15!GO:0031982;vesicle;1.93576943081678e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.31188632314277e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.61740011337437e-15!GO:0016462;pyrophosphatase activity;3.17558182979006e-15!GO:0031988;membrane-bound vesicle;7.9723309788144e-15!GO:0031410;cytoplasmic vesicle;9.8131303105535e-15!GO:0017111;nucleoside-triphosphatase activity;2.3022547686427e-14!GO:0016023;cytoplasmic membrane-bound vesicle;4.85611463734555e-14!GO:0006457;protein folding;8.54864853275323e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.34028376712205e-14!GO:0045271;respiratory chain complex I;9.34028376712205e-14!GO:0005747;mitochondrial respiratory chain complex I;9.34028376712205e-14!GO:0031980;mitochondrial lumen;1.07965203146385e-13!GO:0005759;mitochondrial matrix;1.07965203146385e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.69558173176312e-13!GO:0042773;ATP synthesis coupled electron transport;1.69558173176312e-13!GO:0009059;macromolecule biosynthetic process;1.72058614020772e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.9973463802516e-13!GO:0044445;cytosolic part;3.7967664602228e-13!GO:0032553;ribonucleotide binding;3.97095906049423e-13!GO:0032555;purine ribonucleotide binding;3.97095906049423e-13!GO:0016874;ligase activity;4.22282877820405e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.23661521099024e-13!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.2404631751565e-13!GO:0043687;post-translational protein modification;5.74088527516322e-13!GO:0043412;biopolymer modification;7.18419907206396e-13!GO:0010467;gene expression;8.37459041333005e-13!GO:0012505;endomembrane system;9.15966971572675e-13!GO:0045045;secretory pathway;1.18776788436529e-12!GO:0017076;purine nucleotide binding;1.73145031234623e-12!GO:0005654;nucleoplasm;1.85300584466889e-12!GO:0006464;protein modification process;5.57491215224205e-12!GO:0048193;Golgi vesicle transport;9.63334315889288e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.73820437226344e-11!GO:0006511;ubiquitin-dependent protein catabolic process;3.02932502563907e-11!GO:0007264;small GTPase mediated signal transduction;3.07311990615169e-11!GO:0044451;nucleoplasm part;4.34181935621517e-11!GO:0019941;modification-dependent protein catabolic process;4.39100493100992e-11!GO:0043632;modification-dependent macromolecule catabolic process;4.39100493100992e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.88371828077188e-11!GO:0044257;cellular protein catabolic process;6.83480040694609e-11!GO:0019829;cation-transporting ATPase activity;6.84521564025749e-11!GO:0051082;unfolded protein binding;7.95283711231565e-11!GO:0022618;protein-RNA complex assembly;9.58855952387134e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.63339907249327e-11!GO:0006605;protein targeting;9.97160569378268e-11!GO:0043228;non-membrane-bound organelle;1.05198269775945e-10!GO:0043232;intracellular non-membrane-bound organelle;1.05198269775945e-10!GO:0048770;pigment granule;1.56383335681009e-10!GO:0042470;melanosome;1.56383335681009e-10!GO:0003924;GTPase activity;2.14527371359126e-10!GO:0044265;cellular macromolecule catabolic process;2.647277728688e-10!GO:0015935;small ribosomal subunit;4.79231291720301e-10!GO:0000502;proteasome complex (sensu Eukaryota);6.3158948561057e-10!GO:0008135;translation factor activity, nucleic acid binding;6.93336549990556e-10!GO:0006793;phosphorus metabolic process;1.07397744828606e-09!GO:0006796;phosphate metabolic process;1.07397744828606e-09!GO:0030695;GTPase regulator activity;1.6835012995396e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.88692038151122e-09!GO:0043285;biopolymer catabolic process;2.1726828905204e-09!GO:0030135;coated vesicle;2.83951527225476e-09!GO:0044248;cellular catabolic process;5.20642745797679e-09!GO:0005768;endosome;5.96940592550638e-09!GO:0015934;large ribosomal subunit;7.38230551101084e-09!GO:0008565;protein transporter activity;7.66180938030434e-09!GO:0051186;cofactor metabolic process;7.66180938030434e-09!GO:0008134;transcription factor binding;1.00402211484041e-08!GO:0030163;protein catabolic process;1.11812087756903e-08!GO:0016044;membrane organization and biogenesis;1.11812087756903e-08!GO:0015986;ATP synthesis coupled proton transport;1.20707078335002e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.20707078335002e-08!GO:0008639;small protein conjugating enzyme activity;1.41203557298941e-08!GO:0044431;Golgi apparatus part;1.41203557298941e-08!GO:0005525;GTP binding;1.93386836770072e-08!GO:0004842;ubiquitin-protein ligase activity;1.99730561423689e-08!GO:0032940;secretion by cell;3.44048121576885e-08!GO:0006810;transport;3.7616366980404e-08!GO:0019787;small conjugating protein ligase activity;3.86723555188459e-08!GO:0016604;nuclear body;4.03722830583003e-08!GO:0005083;small GTPase regulator activity;5.06170288955556e-08!GO:0009060;aerobic respiration;5.53156945723876e-08!GO:0007399;nervous system development;6.54589775214605e-08!GO:0016607;nuclear speck;7.06790827793901e-08!GO:0005761;mitochondrial ribosome;7.24746080341e-08!GO:0000313;organellar ribosome;7.24746080341e-08!GO:0009057;macromolecule catabolic process;7.56866074738052e-08!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.57719648629029e-08!GO:0043005;neuron projection;8.22577365019218e-08!GO:0045333;cellular respiration;1.10256736464767e-07!GO:0016310;phosphorylation;1.11422239897401e-07!GO:0006461;protein complex assembly;1.13295003380376e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.27386440594519e-07!GO:0000375;RNA splicing, via transesterification reactions;1.27386440594519e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.27386440594519e-07!GO:0032559;adenyl ribonucleotide binding;1.43242642484262e-07!GO:0005783;endoplasmic reticulum;1.77540582300132e-07!GO:0007010;cytoskeleton organization and biogenesis;1.96325921366422e-07!GO:0006446;regulation of translational initiation;2.10864768536818e-07!GO:0008092;cytoskeletal protein binding;2.42473249438935e-07!GO:0032561;guanyl ribonucleotide binding;3.04191482436269e-07!GO:0019001;guanyl nucleotide binding;3.04191482436269e-07!GO:0009141;nucleoside triphosphate metabolic process;3.04191482436269e-07!GO:0046034;ATP metabolic process;3.84668447934548e-07!GO:0006913;nucleocytoplasmic transport;4.02328311813013e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.24227394776323e-07!GO:0003743;translation initiation factor activity;4.27612737102065e-07!GO:0006754;ATP biosynthetic process;4.27612737102065e-07!GO:0006753;nucleoside phosphate metabolic process;4.27612737102065e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.3167398832871e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.06440710017471e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.06440710017471e-07!GO:0005524;ATP binding;5.19589739249634e-07!GO:0030554;adenyl nucleotide binding;5.23556213290792e-07!GO:0051169;nuclear transport;5.67858558207826e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.87663648701587e-07!GO:0006164;purine nucleotide biosynthetic process;5.97340442390445e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.0572471936698e-07!GO:0005730;nucleolus;6.07698914992791e-07!GO:0006163;purine nucleotide metabolic process;6.16810884422901e-07!GO:0016881;acid-amino acid ligase activity;6.97660755649997e-07!GO:0006413;translational initiation;7.25412981933492e-07!GO:0009055;electron carrier activity;7.45102320667205e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.71610683455682e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.39253211337677e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.39253211337677e-07!GO:0006732;coenzyme metabolic process;8.52571833859356e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.74742648037465e-07!GO:0048471;perinuclear region of cytoplasm;9.25959007234849e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.00822550904196e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.00822550904196e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.07722507825711e-06!GO:0015631;tubulin binding;1.09990833183533e-06!GO:0015630;microtubule cytoskeleton;1.1033846949642e-06!GO:0009150;purine ribonucleotide metabolic process;1.16350776704973e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.18193377149414e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.58038334452905e-06!GO:0009259;ribonucleotide metabolic process;1.61915682395687e-06!GO:0044440;endosomal part;1.90379257316405e-06!GO:0010008;endosome membrane;1.90379257316405e-06!GO:0000139;Golgi membrane;2.22806147939666e-06!GO:0051179;localization;2.30925920856897e-06!GO:0031965;nuclear membrane;2.66446050761728e-06!GO:0030425;dendrite;2.72132500426847e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.80374275129818e-06!GO:0007242;intracellular signaling cascade;2.84197734288109e-06!GO:0009260;ribonucleotide biosynthetic process;2.9501479914233e-06!GO:0051234;establishment of localization;3.34831990144326e-06!GO:0045259;proton-transporting ATP synthase complex;3.66091360681047e-06!GO:0006099;tricarboxylic acid cycle;3.71476186346683e-06!GO:0046356;acetyl-CoA catabolic process;3.71476186346683e-06!GO:0030136;clathrin-coated vesicle;4.30025801621888e-06!GO:0048475;coated membrane;4.4027659764141e-06!GO:0030117;membrane coat;4.4027659764141e-06!GO:0009109;coenzyme catabolic process;6.77021864420764e-06!GO:0048523;negative regulation of cellular process;6.93281856698111e-06!GO:0008287;protein serine/threonine phosphatase complex;8.2499198056327e-06!GO:0017038;protein import;8.759273849593e-06!GO:0042623;ATPase activity, coupled;9.1666600874624e-06!GO:0019717;synaptosome;9.44215813918321e-06!GO:0019899;enzyme binding;1.03050436148305e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.03430168449183e-05!GO:0019226;transmission of nerve impulse;1.07762991959807e-05!GO:0032446;protein modification by small protein conjugation;1.15989683473435e-05!GO:0016887;ATPase activity;1.27362251595991e-05!GO:0006084;acetyl-CoA metabolic process;1.35246387503786e-05!GO:0005635;nuclear envelope;1.50453564794404e-05!GO:0016567;protein ubiquitination;1.73902201639198e-05!GO:0051187;cofactor catabolic process;1.97758254796184e-05!GO:0030029;actin filament-based process;2.21453081628093e-05!GO:0006897;endocytosis;2.2293812573975e-05!GO:0010324;membrane invagination;2.2293812573975e-05!GO:0005769;early endosome;2.4382029305978e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.55110911914938e-05!GO:0005905;coated pit;4.34325728340015e-05!GO:0005770;late endosome;4.54404949320247e-05!GO:0044432;endoplasmic reticulum part;5.76196587050215e-05!GO:0006259;DNA metabolic process;5.81586226579375e-05!GO:0045786;negative regulation of progression through cell cycle;6.04251690794729e-05!GO:0003712;transcription cofactor activity;6.04251690794729e-05!GO:0031252;leading edge;6.04251690794729e-05!GO:0016070;RNA metabolic process;6.40680045742356e-05!GO:0005874;microtubule;7.75920113301902e-05!GO:0005798;Golgi-associated vesicle;8.65967043280561e-05!GO:0009056;catabolic process;8.67728825313803e-05!GO:0048519;negative regulation of biological process;9.2028649635308e-05!GO:0006323;DNA packaging;9.97380528641854e-05!GO:0022890;inorganic cation transmembrane transporter activity;0.000103401897866524!GO:0000245;spliceosome assembly;0.000103627134273386!GO:0006403;RNA localization;0.000103627134273386!GO:0050657;nucleic acid transport;0.000103627134273386!GO:0051236;establishment of RNA localization;0.000103627134273386!GO:0050658;RNA transport;0.000103627134273386!GO:0006888;ER to Golgi vesicle-mediated transport;0.000114425929720667!GO:0008017;microtubule binding;0.000117789483736641!GO:0000159;protein phosphatase type 2A complex;0.000122211017679453!GO:0000151;ubiquitin ligase complex;0.000122341329764739!GO:0008047;enzyme activator activity;0.000127896842985486!GO:0051246;regulation of protein metabolic process;0.00013092856800544!GO:0005096;GTPase activator activity;0.000133293279045841!GO:0007265;Ras protein signal transduction;0.000133293279045841!GO:0051056;regulation of small GTPase mediated signal transduction;0.00013651334625037!GO:0051188;cofactor biosynthetic process;0.00013956110188259!GO:0030120;vesicle coat;0.000140067210974847!GO:0030662;coated vesicle membrane;0.000140067210974847!GO:0006752;group transfer coenzyme metabolic process;0.000169592804710896!GO:0051128;regulation of cellular component organization and biogenesis;0.000170333639363325!GO:0008654;phospholipid biosynthetic process;0.000179158653009699!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000223561991735337!GO:0007268;synaptic transmission;0.000230203148207613!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000231042108885314!GO:0005643;nuclear pore;0.000239038650234847!GO:0005741;mitochondrial outer membrane;0.000256229589556622!GO:0016568;chromatin modification;0.000262514656552485!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000262514656552485!GO:0015399;primary active transmembrane transporter activity;0.000262514656552485!GO:0019208;phosphatase regulator activity;0.000265656295326315!GO:0005789;endoplasmic reticulum membrane;0.000292734238259338!GO:0044453;nuclear membrane part;0.000302129604317866!GO:0006613;cotranslational protein targeting to membrane;0.000303369674389069!GO:0048489;synaptic vesicle transport;0.000303986583741531!GO:0008601;protein phosphatase type 2A regulator activity;0.000309666770217824!GO:0016301;kinase activity;0.000313699465026641!GO:0003724;RNA helicase activity;0.000318144077588531!GO:0043566;structure-specific DNA binding;0.000318825306085587!GO:0003697;single-stranded DNA binding;0.000324934072384777!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000331889699567164!GO:0000902;cell morphogenesis;0.000337629411499489!GO:0032989;cellular structure morphogenesis;0.000337629411499489!GO:0016564;transcription repressor activity;0.000343549921079167!GO:0007269;neurotransmitter secretion;0.00036522055186241!GO:0005793;ER-Golgi intermediate compartment;0.00038600322232546!GO:0003676;nucleic acid binding;0.00038600322232546!GO:0001505;regulation of neurotransmitter levels;0.00040969233186247!GO:0030027;lamellipodium;0.000417676753247409!GO:0031072;heat shock protein binding;0.000455949637781908!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000478770309928455!GO:0019902;phosphatase binding;0.000490883120856533!GO:0045055;regulated secretory pathway;0.000493710139176741!GO:0016197;endosome transport;0.000521685587311602!GO:0004386;helicase activity;0.000532917891389267!GO:0015980;energy derivation by oxidation of organic compounds;0.000553635622683673!GO:0030532;small nuclear ribonucleoprotein complex;0.000554795822623971!GO:0004674;protein serine/threonine kinase activity;0.000589024345741473!GO:0008026;ATP-dependent helicase activity;0.000609668249426558!GO:0008021;synaptic vesicle;0.000648410020010134!GO:0009108;coenzyme biosynthetic process;0.000689983230968914!GO:0043492;ATPase activity, coupled to movement of substances;0.000692427511252817!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000767557676151632!GO:0006606;protein import into nucleus;0.000816223182207607!GO:0031968;organelle outer membrane;0.000827578503996622!GO:0006650;glycerophospholipid metabolic process;0.000844016597648694!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000851901960049237!GO:0019888;protein phosphatase regulator activity;0.000943073845397233!GO:0019867;outer membrane;0.000967117994947936!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000982766297442205!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000984910734408381!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00101311590264591!GO:0022406;membrane docking;0.00108652848492492!GO:0048278;vesicle docking;0.00108652848492492!GO:0051170;nuclear import;0.00110280167441652!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00114170526060178!GO:0043623;cellular protein complex assembly;0.00116444525283107!GO:0051028;mRNA transport;0.00121761792825264!GO:0003729;mRNA binding;0.00126658235401181!GO:0005048;signal sequence binding;0.00128881868450173!GO:0003779;actin binding;0.00136075617772589!GO:0006904;vesicle docking during exocytosis;0.00136806563962959!GO:0005085;guanyl-nucleotide exchange factor activity;0.00142060820245276!GO:0042254;ribosome biogenesis and assembly;0.00143120089757151!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00166077422431467!GO:0004812;aminoacyl-tRNA ligase activity;0.00166077422431467!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00166077422431467!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00167165859705017!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00167165859705017!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00167165859705017!GO:0046467;membrane lipid biosynthetic process;0.00170527115591608!GO:0005813;centrosome;0.00173238493027518!GO:0005839;proteasome core complex (sensu Eukaryota);0.00174071098743503!GO:0004721;phosphoprotein phosphatase activity;0.00190465952124697!GO:0008219;cell death;0.00197944296887908!GO:0016265;death;0.00197944296887908!GO:0030118;clathrin coat;0.00200856251736286!GO:0003714;transcription corepressor activity;0.00201909190579897!GO:0016050;vesicle organization and biogenesis;0.00208674903688278!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00208674903688278!GO:0055083;monovalent inorganic anion homeostasis;0.00208674903688278!GO:0055064;chloride ion homeostasis;0.00208674903688278!GO:0030644;cellular chloride ion homeostasis;0.00208674903688278!GO:0030133;transport vesicle;0.0020890694446197!GO:0006607;NLS-bearing substrate import into nucleus;0.00213222840694585!GO:0006402;mRNA catabolic process;0.00215066478630603!GO:0008154;actin polymerization and/or depolymerization;0.00220946194661498!GO:0043038;amino acid activation;0.00220946194661498!GO:0006418;tRNA aminoacylation for protein translation;0.00220946194661498!GO:0043039;tRNA aminoacylation;0.00220946194661498!GO:0048487;beta-tubulin binding;0.00222926277929039!GO:0005773;vacuole;0.00227097511485411!GO:0031901;early endosome membrane;0.00227097511485411!GO:0005875;microtubule associated complex;0.00227176765409185!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00230691970270237!GO:0051726;regulation of cell cycle;0.0023646913991996!GO:0016311;dephosphorylation;0.00243724394783927!GO:0016740;transferase activity;0.0026747250109568!GO:0005938;cell cortex;0.00279702411094223!GO:0012501;programmed cell death;0.00281974567754016!GO:0005516;calmodulin binding;0.0028488884985514!GO:0007049;cell cycle;0.00287838175495756!GO:0006891;intra-Golgi vesicle-mediated transport;0.00308660040144426!GO:0009966;regulation of signal transduction;0.00310966169344726!GO:0051276;chromosome organization and biogenesis;0.00316795623875535!GO:0046578;regulation of Ras protein signal transduction;0.00318058839300458!GO:0000314;organellar small ribosomal subunit;0.00318058839300458!GO:0005763;mitochondrial small ribosomal subunit;0.00318058839300458!GO:0051427;hormone receptor binding;0.00319273693802594!GO:0009117;nucleotide metabolic process;0.00325022427361514!GO:0006915;apoptosis;0.00333406792175972!GO:0006612;protein targeting to membrane;0.00336219906557927!GO:0000074;regulation of progression through cell cycle;0.00351112209814493!GO:0005869;dynactin complex;0.00360693840322021!GO:0030384;phosphoinositide metabolic process;0.0036635378839308!GO:0050767;regulation of neurogenesis;0.00382633012805648!GO:0005815;microtubule organizing center;0.00393565188910283!GO:0051168;nuclear export;0.00411061861108395!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00415453088380582!GO:0008186;RNA-dependent ATPase activity;0.00417388680847595!GO:0006333;chromatin assembly or disassembly;0.00420894281152019!GO:0065002;intracellular protein transport across a membrane;0.00442685981709994!GO:0030427;site of polarized growth;0.0045825870409195!GO:0008286;insulin receptor signaling pathway;0.00459804841120033!GO:0006916;anti-apoptosis;0.00464679295772932!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0046725815799283!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00481854751079268!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00481854751079268!GO:0050789;regulation of biological process;0.00487095913581792!GO:0006892;post-Golgi vesicle-mediated transport;0.00518849654069166!GO:0043021;ribonucleoprotein binding;0.00533180039424496!GO:0016791;phosphoric monoester hydrolase activity;0.00533180039424496!GO:0043209;myelin sheath;0.00542801337363453!GO:0035257;nuclear hormone receptor binding;0.00553032589817349!GO:0043069;negative regulation of programmed cell death;0.0057534974565967!GO:0051087;chaperone binding;0.00598536347871461!GO:0004298;threonine endopeptidase activity;0.00604477172105513!GO:0007019;microtubule depolymerization;0.00604579838001888!GO:0048167;regulation of synaptic plasticity;0.00604931737333443!GO:0030426;growth cone;0.00607256896168187!GO:0009165;nucleotide biosynthetic process;0.00667419265526211!GO:0007017;microtubule-based process;0.00680121301514774!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00689268355511093!GO:0043066;negative regulation of apoptosis;0.00696864227294862!GO:0033673;negative regulation of kinase activity;0.00698917871763107!GO:0006469;negative regulation of protein kinase activity;0.00698917871763107!GO:0006414;translational elongation;0.00706776875678956!GO:0006470;protein amino acid dephosphorylation;0.00734414176755704!GO:0031902;late endosome membrane;0.00802847647492988!GO:0043681;protein import into mitochondrion;0.00809416821296161!GO:0044448;cell cortex part;0.00823189289379731!GO:0050794;regulation of cellular process;0.00847494674887793!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00848283715131712!GO:0004667;prostaglandin-D synthase activity;0.00848283715131712!GO:0050802;circadian sleep/wake cycle, sleep;0.00848283715131712!GO:0022410;circadian sleep/wake cycle process;0.00848283715131712!GO:0042749;regulation of circadian sleep/wake cycle;0.00848283715131712!GO:0048500;signal recognition particle;0.00860306274068731!GO:0004722;protein serine/threonine phosphatase activity;0.00860306274068731!GO:0046474;glycerophospholipid biosynthetic process;0.00860895370458034!GO:0003713;transcription coactivator activity;0.00861046094425893!GO:0009892;negative regulation of metabolic process;0.00869775999954217!GO:0006366;transcription from RNA polymerase II promoter;0.0088161486544506!GO:0008361;regulation of cell size;0.00902096841920177!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00904180152916692!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00914743935228096!GO:0019904;protein domain specific binding;0.00925548350222387!GO:0051261;protein depolymerization;0.00939538851442629!GO:0050811;GABA receptor binding;0.00944141776366346!GO:0051540;metal cluster binding;0.00961471562309045!GO:0051536;iron-sulfur cluster binding;0.00961471562309045!GO:0051920;peroxiredoxin activity;0.00993124386373713!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0100785244519117!GO:0008139;nuclear localization sequence binding;0.0101176342014494!GO:0031124;mRNA 3'-end processing;0.0101644447640955!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0102931487666028!GO:0007005;mitochondrion organization and biogenesis;0.0105117902202154!GO:0004004;ATP-dependent RNA helicase activity;0.0105117902202154!GO:0006974;response to DNA damage stimulus;0.0105117902202154!GO:0032011;ARF protein signal transduction;0.0108094190886829!GO:0032012;regulation of ARF protein signal transduction;0.0108094190886829!GO:0001578;microtubule bundle formation;0.0111006677512917!GO:0019903;protein phosphatase binding;0.0111024559177733!GO:0003746;translation elongation factor activity;0.0111716804063139!GO:0016859;cis-trans isomerase activity;0.0114102828523394!GO:0050803;regulation of synapse structure and activity;0.0117468982310086!GO:0046930;pore complex;0.0118983456116449!GO:0008180;signalosome;0.0118983456116449!GO:0012506;vesicle membrane;0.0127957989512745!GO:0005762;mitochondrial large ribosomal subunit;0.0129275949765336!GO:0000315;organellar large ribosomal subunit;0.0129275949765336!GO:0030867;rough endoplasmic reticulum membrane;0.0130503472378091!GO:0051348;negative regulation of transferase activity;0.0131146342724712!GO:0016363;nuclear matrix;0.0131925955124225!GO:0051539;4 iron, 4 sulfur cluster binding;0.013297140307358!GO:0006643;membrane lipid metabolic process;0.0133375167953833!GO:0031114;regulation of microtubule depolymerization;0.0133716322389283!GO:0007026;negative regulation of microtubule depolymerization;0.0133716322389283!GO:0006364;rRNA processing;0.013638251841181!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0143215717519772!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0144481498458053!GO:0000323;lytic vacuole;0.015453946851337!GO:0005764;lysosome;0.015453946851337!GO:0030660;Golgi-associated vesicle membrane;0.015777944784762!GO:0016049;cell growth;0.0157887542339184!GO:0006399;tRNA metabolic process;0.0160335727949214!GO:0005885;Arp2/3 protein complex;0.0160835240005858!GO:0005774;vacuolar membrane;0.0164542440563676!GO:0048468;cell development;0.016618627128857!GO:0035035;histone acetyltransferase binding;0.0166368632631421!GO:0043488;regulation of mRNA stability;0.0169125469904818!GO:0043487;regulation of RNA stability;0.0169125469904818!GO:0030137;COPI-coated vesicle;0.0174160838829971!GO:0030742;GTP-dependent protein binding;0.017471608398405!GO:0050749;apolipoprotein E receptor binding;0.0177310738429461!GO:0030041;actin filament polymerization;0.0180687403009093!GO:0019887;protein kinase regulator activity;0.0183257368928117!GO:0000059;protein import into nucleus, docking;0.018650240650594!GO:0042026;protein refolding;0.0190478252397757!GO:0004683;calmodulin-dependent protein kinase activity;0.0192163980922474!GO:0030258;lipid modification;0.0198311040586087!GO:0006401;RNA catabolic process;0.0199834137886669!GO:0000062;acyl-CoA binding;0.0203029042734599!GO:0005791;rough endoplasmic reticulum;0.0203135168464228!GO:0005100;Rho GTPase activator activity;0.0212618484609286!GO:0046488;phosphatidylinositol metabolic process;0.0216246328870554!GO:0008250;oligosaccharyl transferase complex;0.0216312960846779!GO:0003690;double-stranded DNA binding;0.0216632205880262!GO:0006818;hydrogen transport;0.0218910823158129!GO:0007272;ensheathment of neurons;0.0218910823158129!GO:0008366;axon ensheathment;0.0218910823158129!GO:0005868;cytoplasmic dynein complex;0.0219608374303209!GO:0007006;mitochondrial membrane organization and biogenesis;0.022257582164972!GO:0051252;regulation of RNA metabolic process;0.0225316073900943!GO:0003711;transcription elongation regulator activity;0.0226264717734883!GO:0008088;axon cargo transport;0.0228196147285926!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.023069181596047!GO:0016072;rRNA metabolic process;0.0231948999846244!GO:0007050;cell cycle arrest;0.0234721260415963!GO:0030658;transport vesicle membrane;0.0234721260415963!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0234721260415963!GO:0045047;protein targeting to ER;0.0234721260415963!GO:0030132;clathrin coat of coated pit;0.0244461368797268!GO:0043087;regulation of GTPase activity;0.0245790659803134!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0248127327117234!GO:0033043;regulation of organelle organization and biogenesis;0.0248127327117234!GO:0005099;Ras GTPase activator activity;0.0248127327117234!GO:0035258;steroid hormone receptor binding;0.0253889732330922!GO:0006383;transcription from RNA polymerase III promoter;0.025674448468799!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0257578031921928!GO:0016481;negative regulation of transcription;0.0257957314655392!GO:0008022;protein C-terminus binding;0.0273105061294898!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0278799538818228!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0282426679654719!GO:0015992;proton transport;0.0284360745369127!GO:0042176;regulation of protein catabolic process;0.0287467533355154!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0289637258444187!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0296026936697248!GO:0015002;heme-copper terminal oxidase activity;0.0296026936697248!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0296026936697248!GO:0004129;cytochrome-c oxidase activity;0.0296026936697248!GO:0030030;cell projection organization and biogenesis;0.0296942793616559!GO:0048858;cell projection morphogenesis;0.0296942793616559!GO:0032990;cell part morphogenesis;0.0296942793616559!GO:0007034;vacuolar transport;0.0299423135334005!GO:0031371;ubiquitin conjugating enzyme complex;0.0300567014681751!GO:0007266;Rho protein signal transduction;0.0300693610394383!GO:0006644;phospholipid metabolic process;0.0304856242877257!GO:0016585;chromatin remodeling complex;0.0305226640882408!GO:0033130;acetylcholine receptor binding;0.0305235089349452!GO:0004576;oligosaccharyl transferase activity;0.0305567533651448!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0306185078621977!GO:0008312;7S RNA binding;0.0306553968509793!GO:0019894;kinesin binding;0.030703633754778!GO:0006376;mRNA splice site selection;0.0311975899242714!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0311975899242714!GO:0000209;protein polyubiquitination;0.0314625496043145!GO:0016615;malate dehydrogenase activity;0.031872310693454!GO:0044433;cytoplasmic vesicle part;0.0320107064855352!GO:0030119;AP-type membrane coat adaptor complex;0.0320940609110832!GO:0019783;small conjugating protein-specific protease activity;0.0336766092276472!GO:0019992;diacylglycerol binding;0.0337800750314546!GO:0001726;ruffle;0.0348148703505489!GO:0001508;regulation of action potential;0.0351425302493154!GO:0001558;regulation of cell growth;0.0352050602326422!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0355584958680709!GO:0043086;negative regulation of catalytic activity;0.0360051034627811!GO:0031123;RNA 3'-end processing;0.0361143972890717!GO:0006661;phosphatidylinositol biosynthetic process;0.0361143972890717!GO:0046489;phosphoinositide biosynthetic process;0.0362892199243164!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0370382232277491!GO:0004672;protein kinase activity;0.0373401481405483!GO:0004183;carboxypeptidase E activity;0.0375359045347352!GO:0030070;insulin processing;0.0375359045347352!GO:0043025;cell soma;0.0378481127519151!GO:0031324;negative regulation of cellular metabolic process;0.038107021380394!GO:0006378;mRNA polyadenylation;0.0387648628806755!GO:0051287;NAD binding;0.0389090281761336!GO:0019207;kinase regulator activity;0.0389389514933635!GO:0006887;exocytosis;0.0392591178469698!GO:0030424;axon;0.0392591178469698!GO:0042670;retinal cone cell differentiation;0.0393083845306548!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0393083845306548!GO:0046549;retinal cone cell development;0.0393083845306548!GO:0030911;TPR domain binding;0.0400115773283535!GO:0004843;ubiquitin-specific protease activity;0.0420035785605002!GO:0016079;synaptic vesicle exocytosis;0.0422972332074413!GO:0006281;DNA repair;0.0428150231231815!GO:0016579;protein deubiquitination;0.0428588969106253!GO:0022402;cell cycle process;0.0428588969106253!GO:0016126;sterol biosynthetic process;0.0432088892718162!GO:0000287;magnesium ion binding;0.0434525659588044!GO:0005802;trans-Golgi network;0.0443466513878375!GO:0048168;regulation of neuronal synaptic plasticity;0.0443721864493406!GO:0044437;vacuolar part;0.0447839883986779!GO:0005545;phosphatidylinositol binding;0.0450717287377746!GO:0006091;generation of precursor metabolites and energy;0.0451529858097912!GO:0007033;vacuole organization and biogenesis;0.0455931285849824!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.046737606873888!GO:0019198;transmembrane receptor protein phosphatase activity;0.046737606873888!GO:0030131;clathrin adaptor complex;0.0469610978017846!GO:0006665;sphingolipid metabolic process;0.0471808062279739!GO:0005765;lysosomal membrane;0.0474594698925358!GO:0000096;sulfur amino acid metabolic process;0.0489264490124012!GO:0004423;iduronate-2-sulfatase activity;0.0493730429513513!GO:0016272;prefoldin complex;0.0499101292458533
|sample_id=10176
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=putamen
|top_motifs=OCT4_SOX2{dimer}:3.74571538107;MYFfamily:3.62338475537;REST:3.52244424456;RFX1:3.47088148592;AHR_ARNT_ARNT2:3.46532716489;EGR1..3:3.39869703495;ZFP161:3.32802404077;MED-1{core}:3.18046667255;NHLH1,2:3.13927012264;FOXM1:3.10953663759;RREB1:3.05905808436;CUX2:3.01311938835;ARID5B:2.90419905348;PRDM1:2.81909026391;RFX2..5_RFXANK_RFXAP:2.79088378139;PRRX1,2:2.74343382848;ZBTB6:2.72684742768;MTE{core}:2.69334612711;NKX6-1,2:2.62172438838;NKX2-3_NKX2-5:2.60155898525;ATF2:2.4906955825;ADNP_IRX_SIX_ZHX:2.4858743509;PAX5:2.47974133455;HBP1_HMGB_SSRP1_UBTF:2.45518339166;MTF1:2.44070847137;CDC5L:2.36056645781;SOX2:2.3396574263;MZF1:2.32157149406;GTF2I:2.31144856396;DBP:2.22367587124;SOX5:2.18886624488;ALX1:2.14973073424;GATA4:2.05001293999;TFAP2B:1.99848068368;NRF1:1.98063339196;KLF4:1.89381848243;LMO2:1.87737616157;HIC1:1.84872749976;TLX2:1.84271062723;PAX6:1.82961355766;ONECUT1,2:1.79489682813;POU1F1:1.74871543802;BREu{core}:1.7412453936;FOXP1:1.73505561053;PATZ1:1.73146810605;POU6F1:1.68191336237;MAZ:1.66929477071;FOXP3:1.63628669807;IKZF2:1.63612609186;SOX{8,9,10}:1.62952498478;PAX4:1.60995517358;RBPJ:1.59352127042;POU3F1..4:1.58981049295;NKX3-2:1.54148090732;FOXD3:1.51283035174;PAX1,9:1.47725057989;HOX{A4,D4}:1.47037715032;HOXA9_MEIS1:1.46420170661;SOX17:1.45097066343;STAT1,3:1.42419282832;GFI1B:1.3854386437;TGIF1:1.35455255504;PBX1:1.34997341008;SMAD1..7,9:1.31009811693;NFIL3:1.26315464302;ZBTB16:1.25235032723;MAFB:1.25169155318;HOX{A6,A7,B6,B7}:1.25062586648;NFIX:1.24063293923;JUN:1.2401697722;FOXN1:1.22538622643;MYOD1:1.14214446139;CRX:1.10378869044;POU5F1:1.10106986382;CREB1:1.08128299191;ZNF143:1.04134037102;ZNF384:1.02652970377;LEF1_TCF7_TCF7L1,2:1.02621919698;HMGA1,2:1.02275861628;TOPORS:1.01338248899;NANOG:1.00806273331;XBP1:0.992323799726;T:0.9772126603;TEF:0.929964741548;SP1:0.870608992502;TFDP1:0.813172241272;EP300:0.807715074733;EBF1:0.795380081484;YY1:0.79047065373;ZIC1..3:0.767634208655;GFI1:0.766279651977;SREBF1,2:0.754849809033;GCM1,2:0.748205871569;FOX{I1,J2}:0.673549812923;HMX1:0.662415724064;BPTF:0.612059689635;ZEB1:0.571262541722;STAT2,4,6:0.565118986966;AR:0.552575456128;GTF2A1,2:0.545527637731;MYBL2:0.519604025273;GZF1:0.471476911666;LHX3,4:0.454724618156;HAND1,2:0.440296668008;PDX1:0.401459212044;ZNF423:0.364283764779;VSX1,2:0.352113029125;FOX{F1,F2,J1}:0.34925339935;TFAP2{A,C}:0.249998505882;PAX2:0.244004931991;NR3C1:0.24379169186;MEF2{A,B,C,D}:0.211552886395;ATF4:0.192403554163;UFEwm:0.167049910654;CDX1,2,4:0.124879941158;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.108381711274;SPZ1:0.105696276737;ATF5_CREB3:0.0945905928571;NFY{A,B,C}:0.0590593521508;TLX1..3_NFIC{dimer}:-0.0194609567203;IKZF1:-0.0370515387551;ZNF238:-0.0393571308568;AIRE:-0.0617172603882;FOXO1,3,4:-0.0787838732173;FOX{D1,D2}:-0.0869302087466;HSF1,2:-0.0920231948126;PAX3,7:-0.134163745702;RORA:-0.189837065966;IRF7:-0.210383829341;ESRRA:-0.211071321315;SNAI1..3:-0.216120768858;bHLH_family:-0.243496330471;DMAP1_NCOR{1,2}_SMARC:-0.318981060025;NKX3-1:-0.361302027625;NFE2L1:-0.368032430951;IRF1,2:-0.393579511318;PITX1..3:-0.411944391303;CEBPA,B_DDIT3:-0.486864479331;SPI1:-0.497404355694;NFE2L2:-0.507242716894;FOXQ1:-0.553007203505;TBX4,5:-0.565858942004;NFE2:-0.567802322779;FOXL1:-0.61240008152;NR5A1,2:-0.676293298786;XCPE1{core}:-0.681275433598;GATA6:-0.684785657419;RXR{A,B,G}:-0.697424642369;NFATC1..3:-0.707148552585;NANOG{mouse}:-0.789183935958;SPIB:-0.809746431145;NKX2-2,8:-0.813720674513;HIF1A:-0.817615522139;EVI1:-0.888687135185;ATF6:-0.894254659141;ETS1,2:-0.912052370977;FOS_FOS{B,L1}_JUN{B,D}:-0.931808279441;HNF1A:-0.953796792612;FOSL2:-1.01865643429;TFAP4:-1.03287605221;ELK1,4_GABP{A,B1}:-1.03332404768;HNF4A_NR2F1,2:-1.04605769554;ALX4:-1.09583877191;FOXA2:-1.12071809042;NKX2-1,4:-1.12290426628;POU2F1..3:-1.12705577592;BACH2:-1.12764749491;RXRA_VDR{dimer}:-1.16602315343;TEAD1:-1.18680679495;MYB:-1.20756186365;PAX8:-1.20890125074;NR1H4:-1.22498635741;NFKB1_REL_RELA:-1.22987240858;TP53:-1.25446481169;TFCP2:-1.29089575941;ZNF148:-1.30168916313;RUNX1..3:-1.32914620966;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.33957065153;GLI1..3:-1.36468147323;E2F1..5:-1.37676092556;ESR1:-1.44526034945;ELF1,2,4:-1.59241447172;HLF:-1.60480781922;TBP:-1.61910559777;HES1:-1.72127434655;SRF:-1.93829764317;NR6A1:-1.99990530776;TAL1_TCF{3,4,12}:-2.01597414788;STAT5{A,B}:-2.44005633842;EN1,2:-2.50943029737;HOX{A5,B5}:-2.74859820823;PPARG:-2.76312280038
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10176-103C5;search_select_hide=table117:FF:10176-103C5
}}
}}

Latest revision as of 12:25, 3 June 2020

Name:putamen, adult, donor10196
Species:Human (Homo sapiens)
Library ID:CNhs12324
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueputamen
dev stageNA
sexfemale
age60
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationPeter Heutink
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005287
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12324 CAGE DRX008714 DRR009586
Accession ID Hg19

Library idBAMCTSS
CNhs12324 DRZ001011 DRZ002396
Accession ID Hg38

Library idBAMCTSS
CNhs12324 DRZ012361 DRZ013746
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.339
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.854
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.309
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.288
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.436
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0634
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.119
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0489
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.119
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.252
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.119
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.187
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.799
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0634
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0501
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0441
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.119
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0138
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0634
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.869
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0987
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.212
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0634
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0634
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.212
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.505
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.252
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.00596
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0522
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.6
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0321
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.0634
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.383
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.582
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.494
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.813
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.0634
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.119
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.649
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.252
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.867
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.338
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0431
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.436
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12324

Jaspar motifP-value
MA0002.20.0083
MA0003.10.255
MA0004.10.438
MA0006.10.248
MA0007.10.33
MA0009.10.257
MA0014.10.753
MA0017.10.00185
MA0018.20.19
MA0019.10.603
MA0024.10.947
MA0025.10.579
MA0027.10.372
MA0028.10.0984
MA0029.10.0254
MA0030.10.92
MA0031.10.479
MA0035.20.0104
MA0038.10.232
MA0039.20.144
MA0040.10.788
MA0041.10.613
MA0042.10.993
MA0043.10.66
MA0046.10.00728
MA0047.20.0207
MA0048.10.176
MA0050.10.00718
MA0051.10.0412
MA0052.10.525
MA0055.10.00252
MA0057.10.872
MA0058.10.366
MA0059.10.104
MA0060.10.492
MA0061.10.00702
MA0062.20.00559
MA0065.29.57843e-4
MA0066.10.0215
MA0067.10.634
MA0068.10.877
MA0069.10.804
MA0070.10.443
MA0071.10.0166
MA0072.10.149
MA0073.10.286
MA0074.10.303
MA0076.10.247
MA0077.10.471
MA0078.10.697
MA0079.20.534
MA0080.23.01016e-10
MA0081.10.0204
MA0083.10.0101
MA0084.10.815
MA0087.10.809
MA0088.10.204
MA0090.10.171
MA0091.10.137
MA0092.10.249
MA0093.10.444
MA0099.23.59434e-17
MA0100.10.758
MA0101.10.00496
MA0102.20.219
MA0103.10.355
MA0104.20.53
MA0105.10.00258
MA0106.10.0156
MA0107.10.00488
MA0108.20.0881
MA0111.10.55
MA0112.28.84245e-4
MA0113.10.423
MA0114.10.00284
MA0115.10.859
MA0116.10.0117
MA0117.10.826
MA0119.10.0638
MA0122.10.611
MA0124.10.861
MA0125.10.344
MA0131.10.994
MA0135.10.0545
MA0136.18.07754e-14
MA0137.20.804
MA0138.20.551
MA0139.10.373
MA0140.10.00194
MA0141.10.00846
MA0142.10.89
MA0143.10.831
MA0144.10.421
MA0145.10.107
MA0146.10.0158
MA0147.10.411
MA0148.10.0202
MA0149.10.0133
MA0150.12.50392e-4
MA0152.10.809
MA0153.10.414
MA0154.10.041
MA0155.10.644
MA0156.16.88006e-8
MA0157.10.141
MA0159.10.019
MA0160.10.0171
MA0162.10.122
MA0163.17.0597e-5
MA0164.10.753
MA0258.10.0138
MA0259.10.981



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12324

Novel motifP-value
10.0668
100.0449
1000.34
1010.378
1020.66
1030.132
1040.134
1050.125
1060.0244
1070.0954
1080.94
1090.00515
110.0152
1100.0561
1110.199
1120.452
1130.631
1140.204
1150.735
1160.18
1170.0113
1180.188
1190.146
120.831
1200.171
1210.236
1220.96
1230.712
1240.165
1250.47
1260.0289
1270.298
1280.163
1290.411
130.00154
1300.279
1310.125
1320.723
1330.00964
1340.715
1350.346
1360.0114
1370.556
1380.919
1390.198
140.783
1400.612
1410.469
1420.768
1430.0195
1440.84
1450.152
1460.308
1470.988
1480.111
1490.245
150.0746
1500.144
1510.521
1520.0674
1530.734
1540.352
1550.765
1560.47
1570.414
1580.664
1590.0589
160.0684
1600.215
1610.295
1620.83
1630.933
1640.0345
1650.0426
1660.942
1670.86
1680.221
1690.00969
170.117
180.168
190.113
20.768
200.179
210.144
220.147
230.22
240.0478
250.461
262.46237e-4
270.643
280.767
290.0186
30.0544
300.99
310.769
320.0343
330.0609
340.621
350.816
360.128
370.0385
380.293
390.231
40.751
400.026
410.346
420.285
430.0973
440.255
450.597
460.0773
470.0685
480.0556
490.168
50.372
500.28
510.469
520.433
530.956
540.382
550.41
560.494
570.31
580.297
590.0684
60.944
600.0472
610.12
620.162
630.17
640.184
650.185
660.147
670.31
680.122
690.359
70.0504
700.046
710.0101
720.361
730.0275
740.653
750.0388
760.517
770.132
780.00207
790.231
80.062
800.503
810.639
820.587
830.0667
840.892
850.196
860.225
878.58404e-4
880.797
890.481
90.347
900.0723
910.407
920.471
930.954
940.239
950.0239
960.783
970.66
980.258
990.537



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12324


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001874 (putamen)
0000369 (corpus striatum)
0002435 (striatum)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009663 (telencephalic nucleus)
0002420 (basal ganglion)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0000125 (neural nucleus)
0002020 (gray matter)
0007245 (nuclear complex of neuraxis)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0010009 (aggregate regional part of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0005383 (caudate-putamen)
0010011 (collection of basal ganglia)
0000204 (ventral part of telencephalon)
0005382 (dorsal striatum)
0000454 (cerebral subcortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010087 (human putamen - adult donor sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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