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(Created page with "{{f5samples |id=FF:10451-106G1 |name=embryonic kidney cell line: HEK293/SLAM infection, 24hr, biol_rep1 |sample_id=10451 |rna_tube_id=106G1 |rna_box=106 |rna_position=G1...")
 
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{{f5samples
{{f5samples
|id=FF:10451-106G1
|DRA_sample_Accession=CAGE@SAMD00005447
|name=embryonic kidney cell line: HEK293/SLAM infection, 24hr, biol_rep1
|accession_numbers=CAGE;DRX007870;DRR008742;DRZ000167;DRZ001552;DRZ011517;DRZ012902
|sample_id=10451
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002113,UBERON:0002100,UBERON:0000062,UBERON:0000475,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0005173,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0000916
|rna_tube_id=106G1
|rna_box=106
|rna_position=G1
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.20000
|rna_od260/230=0.90000
|rna_od260/280=2.08000
|sample_cell_type=unclassifiable
|sample_cell_line=HEK293/SLAM
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=8.10900
|rna_concentration=0.32436
|sample_note=
|profile_hcage=CNhs11047,LSID722,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0001008,UBERON:0001062,UBERON:0002100,UBERON:0002113,UBERON:0002417,UBERON:0003103,UBERON:0005095,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005423,UBERON:0006554,UBERON:0007687
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100067,FF:0102733,FF:0100669,FF:0100007
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chrX:84498989..84499003,+!p1@ZNF711!2.08!160.70!ZNF711;;chr12:8034651..8034657,+!p@chr12:8034651..8034657,+!1.92!82.68!NANOGP1;;chr7:28448965..28448994,+!p2@CREB5!1.71!171.37!CREB5;;chr15:76629123..76629151,+!p1@ISL2!1.68!51.41!ISL2;;chr2:172967621..172967637,-!p1@DLX2!1.59!97.86!DLX2;;chr8:81398682..81398697,+!p6@ZBTB10!1.55!45.40!ZBTB10;;chr7:28448995..28449011,+!p4@CREB5!1.54!46.75!CREB5;;chr1:935467..935484,-!p1@HES4!1.53!140.70!HES4;;chr19:23941647..23941672,-!p2@ZNF681!1.52!52.46!ZNF681;;chr7:28449026..28449037,+!p8@CREB5!1.50!30.67!CREB5;;chr1:212782094..212782109,+!p1@ATF3!1.49!776.72!ATF3;;chr22:21356345..21356367,-!p3@THAP7!1.48!38.93!THAP7;;chr6:20402102..20402152,+!p1@E2F3!1.47!113.49!E2F3;;chr11:615570..615721,-!p2@IRF7!1.47!55.47!IRF7;;chr1:227751231..227751273,+!p1@ZNF678!1.40!148.82!ZNF678;;chr7:27205136..27205164,-!p1@HOXA9!1.40!24.20!HOXA9;;chr17:46703942..46703964,-!p4@HOXB9!1.40!24.20!HOXB9;;chr6:19837592..19837621,+!p1@ID4!1.38!134.99!ID4;;chr11:615942..615957,-!p1@IRF7!1.37!204.74!IRF7;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!1.37!22.70!EN2;;chr17:46703687..46703740,-!p1@HOXB9!1.36!21.80!HOXB9;;chr21:34398234..34398250,+!p1@OLIG2!1.34!21.05!OLIG2;;chr5:172662197..172662216,-!p1@NKX2-5!1.34!20.89!NKX2-5;;chr7:99680302..99680329,-!p5@ZNF3!1.34!20.89!ZNF3;;chr17:46620898..46620927,-!p9@HOXB2!1.31!22.85!HOXB2;;chr10:124768217..124768228,-!p2@IKZF5!1.31!19.24!IKZF5;;chr17:8027418..8027432,-!p1@HES7!1.30!19.09!HES7;;chr20:42295713..42295738,+!p2@MYBL2!1.29!106.73!MYBL2;;chr1:935496..935509,-!p3@HES4!1.29!27.81!HES4;;chr7:28449015..28449024,+!p6@CREB5!1.28!18.04!CREB5;;chr19:23433144..23433204,-!p1@ZNF724P!1.26!76.82!ZNF724P;;chr19:33793430..33793447,-!p1@CEBPA!1.26!70.65!CEBPA;;chr15:76629007..76629012,+!p4@ISL2!1.26!17.29!ISL2;;chr6:90929475..90929486,-!p8@BACH2!1.26!17.14!BACH2;;chr6:44355499..44355514,+!p3@CDC5L!1.25!18.49!CDC5L;;chr6:56954867..56954882,+!p2@ZNF451!1.24!47.80!ZNF451;;chr12:108154309..108154359,-!p6@PRDM4!1.24!16.23!PRDM4;;chr6:126070769..126070801,+!p1@HEY2!1.23!18.19!HEY2;;chr2:223163706..223163730,-!p1@PAX3!1.23!16.08!PAX3;;chr6:90929463..90929474,-!p9@BACH2!1.22!15.63!BACH2;;chr19:21265028..21265052,+!p2@ZNF714!1.21!27.06!ZNF714;;chr19:11750566..11750627,+!p1@ZNF833P!1.21!20.59!ZNF833P;;chr5:43121586..43121601,+!p10@ZNF131!1.21!17.29!ZNF131;;chr19:21106081..21106115,+!p2@ZNF85!1.19!42.39!ZNF85;;chr2:122042770..122042785,-!p1@TFCP2L1!1.19!14.58!TFCP2L1;;chr7:35293685..35293718,-!p1@TBX20!1.18!14.28!TBX20;;chr12:54393880..54393962,+!p1@HOXC9!1.18!14.13!HOXC9;;chr5:134369905..134369972,-!p1@PITX1!1.16!20.44!PITX1;;chrX:84499081..84499115,+!p2@ZNF711!1.16!19.99!ZNF711;;chr1:91487774..91487802,-!p2@ZNF644!1.15!34.72!ZNF644;;chr1:227751287..227751298,+!p2@ZNF678!1.15!13.23!ZNF678;;chr7:64838786..64838809,+!p2@ZNF92!1.14!72.76!ZNF92;;chr7:27205106..27205134,-!p2@HOXA9!1.14!12.78!HOXA9;;chr17:46667594..46667619,-!p1@HOXB3!1.14!12.78!HOXB3;;chr1:91487836..91487854,-!p3@ZNF644!1.12!27.66!ZNF644;;chr17:4890649..4890664,-!p5@CAMTA2!1.12!12.33!CAMTA2;;chr19:21264991..21265026,+!p1@ZNF714!1.11!78.17!ZNF714;;chr2:200322654..200322707,-!p2@SATB2!1.11!17.29!SATB2;;chr3:40547564..40547616,+!p1@ZNF620!1.11!16.84!ZNF620;;chr10:8095593..8095625,+!p3@GATA3!1.11!13.83!GATA3;;chr14:37131058..37131139,+!p1@PAX9!1.11!12.03!PAX9;;chr20:42295745..42295765,+!p1@MYBL2!1.10!190.46!MYBL2;;chr10:104155480..104155534,+!p2@NFKB2!1.10!74.71!NFKB2;;chr19:22034809..22034878,-!p2@ZNF43!1.10!40.59!ZNF43;;chr19:21950332..21950356,-!p2@ZNF100!1.10!24.50!ZNF100;;chr19:24097706..24097731,+!p2@ZNF726!1.10!22.40!ZNF726;;chr10:97889464..97889494,+!p3@ZNF518A!1.10!21.65!ZNF518A;;chr8:81397820..81397836,+!p2@ZBTB10!1.10!14.73!ZBTB10;;chr7:28725715..28725727,+!p3@CREB5!1.10!13.68!CREB5;;chr17:38020392..38020477,-!p1@IKZF3!1.10!11.73!IKZF3;;chr1:59249645..59249656,-!p4@JUN!1.09!28.41!JUN;;chr8:80679993..80680011,-!p1@HEY1!1.09!16.39!HEY1;;chr7:27192185..27192209,-!p1@HOXA3!1.09!11.42!HOXA3;;chr16:29819403..29819442,+!p5@MAZ!1.08!90.65!MAZ;;chr16:29818160..29818188,+!p6@MAZ!1.08!52.16!MAZ;;chr16:30621615..30621660,-!p2@ZNF689!1.08!20.29!ZNF689;;chrX:148841186..148841193,+!p@chrX:148841186..148841193,+!1.08!10.97!HSFX1;;chr8:81397846..81397860,+!p3@ZBTB10!1.07!13.38!ZBTB10;;chr1:149858461..149858479,+!p1@BOLA1!1.06!4140.06!BOLA1;;chr19:21203481..21203504,+!p2@ZNF430!1.06!24.65!ZNF430;;chr7:64126535..64126559,+!p2@ZNF107!1.06!22.70!ZNF107;;chr2:176969228..176969260,+!p1@HOXD11!1.06!10.37!HOXD11;;chr19:45004556..45004581,-!p1@ZNF180!1.05!62.38!ZNF180;;chr19:21512115..21512135,-!p3@ZNF708!1.05!21.05!ZNF708;;chr10:104154246..104154347,+!p3@NFKB2!1.04!61.93!NFKB2;;chr19:45504688..45504782,+!p1@RELB!1.04!60.58!RELB;;chr18:77155922..77155939,+!p1@NFATC1!1.04!27.66!NFATC1;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!1.03!62.08!SNAPC4;;chr19:58694421..58694485,+!p1@ZNF274!1.03!52.46!ZNF274;;chr7:64023410..64023428,-!p2@ZNF680!1.03!15.63!ZNF680;;chr17:4890672..4890692,-!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|ffid_belonging_in_development=UBERON:0003104,UBERON:0003918,UBERON:0007687
|fonse_cell_line=FF:0100067,FF:0100669
|fonse_cell_line=FF:0100067,FF:0100669
|fonse_cell_line_closure=FF:0100067,FF:0100669
|fonse_cell_line_closure=FF:0100067,FF:0100669
Line 67: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520kidney%2520cell%2520line%253a%2520HEK293%252fSLAM%2520infection%252c%252024hr.CNhs11047.10451-106G1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520kidney%2520cell%2520line%253a%2520HEK293%252fSLAM%2520infection%252c%252024hr.CNhs11047.10451-106G1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520kidney%2520cell%2520line%253a%2520HEK293%252fSLAM%2520infection%252c%252024hr.CNhs11047.10451-106G1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520kidney%2520cell%2520line%253a%2520HEK293%252fSLAM%2520infection%252c%252024hr.CNhs11047.10451-106G1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520kidney%2520cell%2520line%253a%2520HEK293%252fSLAM%2520infection%252c%252024hr.CNhs11047.10451-106G1.hg38.nobarcode.ctss.bed.gz
|id=FF:10451-106G1
|is_a=EFO:0002091;;FF:0000210;;FF:0100007
|is_obsolete=
|library_id=CNhs11047
|library_id_phase_based=2:CNhs11047
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10451
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10451
|name=embryonic kidney cell line: HEK293/SLAM infection, 24hr
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11047,LSID722,release008,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=106
|rna_catalog_number=
|rna_concentration=0.32436
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=0.9
|rna_od260/280=2.08
|rna_position=G1
|rna_rin=9.2
|rna_sample_type=total RNA
|rna_tube_id=106G1
|rna_weight_ug=8.109
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=HEK293/SLAM
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Chieko Kai (University of Tokyo)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0044424;intracellular part;0!GO:0005622;intracellular;0!GO:0043231;intracellular membrane-bound organelle;5.73790623542819e-297!GO:0043227;membrane-bound organelle;5.89424510118049e-297!GO:0043226;organelle;6.0091159393086e-294!GO:0043229;intracellular organelle;1.82871352095155e-293!GO:0005634;nucleus;4.69949155865039e-191!GO:0044422;organelle part;5.24572592979331e-164!GO:0044446;intracellular organelle part;1.51730306823845e-162!GO:0005737;cytoplasm;2.81834342780714e-150!GO:0044237;cellular metabolic process;9.40369410932629e-149!GO:0043170;macromolecule metabolic process;4.16681521229944e-146!GO:0044238;primary metabolic process;2.75521640806534e-145!GO:0043283;biopolymer metabolic process;8.48172092254015e-119!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.15454147795221e-117!GO:0032991;macromolecular complex;4.31584606338707e-117!GO:0010467;gene expression;1.6005683817933e-109!GO:0044428;nuclear part;8.87355694850534e-109!GO:0030529;ribonucleoprotein complex;7.38902190091759e-104!GO:0003723;RNA binding;4.96957357087531e-100!GO:0003676;nucleic acid binding;8.77099343461593e-97!GO:0043233;organelle lumen;8.77099343461593e-97!GO:0031974;membrane-enclosed lumen;8.77099343461593e-97!GO:0044444;cytoplasmic part;4.82711690170699e-96!GO:0016070;RNA metabolic process;2.01731455992678e-72!GO:0006396;RNA processing;2.29041330280117e-72!GO:0031981;nuclear lumen;3.93340009115888e-69!GO:0005739;mitochondrion;4.91501631408274e-68!GO:0005515;protein binding;1.26128246524809e-62!GO:0005840;ribosome;8.73851651337049e-58!GO:0006412;translation;3.16274602002341e-57!GO:0043234;protein complex;7.85189208330964e-57!GO:0006259;DNA metabolic process;9.01597754460629e-56!GO:0003735;structural constituent of ribosome;1.09289521090046e-48!GO:0016043;cellular component organization and biogenesis;8.30918269258321e-48!GO:0043228;non-membrane-bound organelle;2.06631255891156e-47!GO:0043232;intracellular non-membrane-bound organelle;2.06631255891156e-47!GO:0016071;mRNA metabolic process;3.63153984360735e-47!GO:0008380;RNA splicing;5.85563773581036e-45!GO:0044249;cellular biosynthetic process;8.15319992264992e-44!GO:0019538;protein metabolic process;3.06837049433578e-43!GO:0007049;cell cycle;4.26683665524823e-43!GO:0006397;mRNA processing;1.88673848359674e-42!GO:0006996;organelle organization and biogenesis;2.41318114253494e-42!GO:0033279;ribosomal subunit;3.21914768001212e-42!GO:0015031;protein transport;2.4770581841285e-41!GO:0033036;macromolecule localization;2.5387419844495e-41!GO:0005654;nucleoplasm;1.21220836849623e-40!GO:0044429;mitochondrial part;1.21220836849623e-40!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.24737408765732e-40!GO:0009058;biosynthetic process;3.19692406856181e-40!GO:0000166;nucleotide binding;2.18378151367234e-39!GO:0044267;cellular protein metabolic process;2.36860256298466e-39!GO:0006974;response to DNA damage stimulus;4.27529365587334e-39!GO:0031967;organelle envelope;7.59288691127389e-39!GO:0031975;envelope;1.17727070313331e-38!GO:0044260;cellular macromolecule metabolic process;2.67905208415461e-38!GO:0031090;organelle membrane;1.17712935221377e-37!GO:0009059;macromolecule biosynthetic process;1.31502764297156e-37!GO:0008104;protein localization;4.77987806972265e-37!GO:0065003;macromolecular complex assembly;1.12702795599162e-36!GO:0045184;establishment of protein localization;2.93426380094455e-36!GO:0046907;intracellular transport;6.16654600557149e-36!GO:0022402;cell cycle process;1.03603725059224e-34!GO:0006281;DNA repair;1.37958839173302e-34!GO:0044451;nucleoplasm part;7.08668999600376e-33!GO:0022607;cellular component assembly;8.8780656226146e-33!GO:0005681;spliceosome;8.9187872321442e-33!GO:0005730;nucleolus;3.33269865123124e-32!GO:0005694;chromosome;2.39854139609305e-30!GO:0006886;intracellular protein transport;2.57039659647945e-30!GO:0005829;cytosol;4.96983742283e-30!GO:0000278;mitotic cell cycle;9.07867814131412e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.38440882799942e-29!GO:0032553;ribonucleotide binding;1.02368417415603e-28!GO:0032555;purine ribonucleotide binding;1.02368417415603e-28!GO:0017076;purine nucleotide binding;2.22448520339459e-27!GO:0019222;regulation of metabolic process;2.9938337209804e-27!GO:0016874;ligase activity;3.14173796616115e-27!GO:0006350;transcription;1.076802435172e-26!GO:0006260;DNA replication;1.81731111841904e-26!GO:0003677;DNA binding;3.55803307530579e-26!GO:0005524;ATP binding;9.0330823510625e-26!GO:0009719;response to endogenous stimulus;1.99360201569281e-25!GO:0044427;chromosomal part;2.33725075079696e-25!GO:0032559;adenyl ribonucleotide binding;2.51035237046533e-25!GO:0006512;ubiquitin cycle;2.68862132248732e-25!GO:0016462;pyrophosphatase activity;4.41237284283723e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.92958324829328e-25!GO:0050794;regulation of cellular process;6.74825641317809e-25!GO:0031323;regulation of cellular metabolic process;6.81351217931625e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;7.32665005693883e-25!GO:0051649;establishment of cellular localization;9.56047671141905e-25!GO:0019866;organelle inner membrane;1.18212394822875e-24!GO:0017111;nucleoside-triphosphatase activity;1.25967908107841e-24!GO:0022403;cell cycle phase;1.32747131788842e-24!GO:0000087;M phase of mitotic cell cycle;1.38557402367214e-24!GO:0007067;mitosis;2.58312900106245e-24!GO:0005740;mitochondrial envelope;4.67308594843891e-24!GO:0032774;RNA biosynthetic process;6.00638123972918e-24!GO:0051641;cellular localization;6.09969296846812e-24!GO:0030554;adenyl nucleotide binding;9.86280221758493e-24!GO:0006351;transcription, DNA-dependent;1.08508450416536e-23!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.93739216113027e-23!GO:0010468;regulation of gene expression;3.67268205730821e-23!GO:0051276;chromosome organization and biogenesis;3.8661089611355e-23!GO:0015934;large ribosomal subunit;8.56297493984169e-23!GO:0031966;mitochondrial membrane;9.44774286912577e-23!GO:0044445;cytosolic part;1.55303473919352e-22!GO:0005743;mitochondrial inner membrane;1.62058216272686e-22!GO:0000279;M phase;1.5789995274582e-21!GO:0042254;ribosome biogenesis and assembly;1.77996340923431e-21!GO:0031980;mitochondrial lumen;1.16367777312636e-20!GO:0005759;mitochondrial matrix;1.16367777312636e-20!GO:0004386;helicase activity;1.43660749213358e-20!GO:0045449;regulation of transcription;1.45650587251848e-20!GO:0015935;small ribosomal subunit;1.63122717319156e-20!GO:0006457;protein folding;2.42800448755122e-20!GO:0019941;modification-dependent protein catabolic process;2.55785698914538e-20!GO:0043632;modification-dependent macromolecule catabolic process;2.55785698914538e-20!GO:0006399;tRNA metabolic process;3.37342626443969e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;3.48285850386963e-20!GO:0051301;cell division;5.1682230334735e-20!GO:0006511;ubiquitin-dependent protein catabolic process;7.06679898384849e-20!GO:0006355;regulation of transcription, DNA-dependent;1.38557517184286e-19!GO:0044257;cellular protein catabolic process;1.47877414256872e-19!GO:0022618;protein-RNA complex assembly;1.54891146421147e-19!GO:0006119;oxidative phosphorylation;2.23771421737624e-19!GO:0008134;transcription factor binding;8.15625151236085e-19!GO:0044265;cellular macromolecule catabolic process;1.08393229734737e-18!GO:0044455;mitochondrial membrane part;2.50924671862894e-18!GO:0006366;transcription from RNA polymerase II promoter;4.58307004010591e-18!GO:0051726;regulation of cell cycle;4.71848339102721e-18!GO:0031965;nuclear membrane;9.61058292559206e-18!GO:0000074;regulation of progression through cell cycle;1.02873966509641e-17!GO:0006605;protein targeting;1.36957325452271e-17!GO:0050789;regulation of biological process;1.38533228187559e-17!GO:0044453;nuclear membrane part;1.65168921310281e-17!GO:0016887;ATPase activity;1.74756018756084e-17!GO:0043285;biopolymer catabolic process;1.77731365144035e-17!GO:0042623;ATPase activity, coupled;2.03681507541796e-17!GO:0005761;mitochondrial ribosome;4.07641006109765e-17!GO:0000313;organellar ribosome;4.07641006109765e-17!GO:0043412;biopolymer modification;5.01394387367434e-17!GO:0016604;nuclear body;1.02727181140053e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.11933394199429e-16!GO:0008026;ATP-dependent helicase activity;1.35516479521946e-16!GO:0005643;nuclear pore;2.43772562263094e-16!GO:0008135;translation factor activity, nucleic acid binding;3.87389715189842e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.52845989512603e-16!GO:0000375;RNA splicing, via transesterification reactions;5.52845989512603e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.52845989512603e-16!GO:0006323;DNA packaging;5.84165934909743e-16!GO:0030163;protein catabolic process;1.08402822380592e-15!GO:0005635;nuclear envelope;2.20515819051689e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.92254577610887e-15!GO:0009057;macromolecule catabolic process;8.50781779963225e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.07180385476653e-14!GO:0015630;microtubule cytoskeleton;1.20936555763109e-14!GO:0006913;nucleocytoplasmic transport;1.6346265167006e-14!GO:0006364;rRNA processing;2.19077515505574e-14!GO:0016072;rRNA metabolic process;2.77645695370086e-14!GO:0051082;unfolded protein binding;2.87379902164312e-14!GO:0065004;protein-DNA complex assembly;3.47571184838072e-14!GO:0051169;nuclear transport;4.3330817253134e-14!GO:0043687;post-translational protein modification;4.60834640517297e-14!GO:0006464;protein modification process;6.87048014898706e-14!GO:0005746;mitochondrial respiratory chain;7.31510587547401e-14!GO:0012505;endomembrane system;2.10327889530455e-13!GO:0006403;RNA localization;4.01863473739981e-13!GO:0050657;nucleic acid transport;4.33575552561866e-13!GO:0051236;establishment of RNA localization;4.33575552561866e-13!GO:0050658;RNA transport;4.33575552561866e-13!GO:0006333;chromatin assembly or disassembly;5.07060996965595e-13!GO:0000785;chromatin;6.37622403095672e-13!GO:0051186;cofactor metabolic process;6.86880655067521e-13!GO:0065002;intracellular protein transport across a membrane;6.96524615066421e-13!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.33669769220681e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.02554253955652e-12!GO:0044248;cellular catabolic process;1.17764375922478e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.19274426435434e-12!GO:0003954;NADH dehydrogenase activity;1.19274426435434e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.19274426435434e-12!GO:0016607;nuclear speck;1.25987073209997e-12!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.30130549088998e-12!GO:0004812;aminoacyl-tRNA ligase activity;1.30130549088998e-12!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.30130549088998e-12!GO:0046930;pore complex;1.46385065938121e-12!GO:0008639;small protein conjugating enzyme activity;1.87767934902101e-12!GO:0003743;translation initiation factor activity;2.0126779058021e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.22663890400067e-12!GO:0006261;DNA-dependent DNA replication;3.41741086835525e-12!GO:0004842;ubiquitin-protein ligase activity;3.78144473484892e-12!GO:0017038;protein import;4.23751742894812e-12!GO:0043038;amino acid activation;5.68170458465412e-12!GO:0006418;tRNA aminoacylation for protein translation;5.68170458465412e-12!GO:0043039;tRNA aminoacylation;5.68170458465412e-12!GO:0019787;small conjugating protein ligase activity;7.72443657258066e-12!GO:0016779;nucleotidyltransferase activity;1.26795316957683e-11!GO:0006413;translational initiation;2.21026365506312e-11!GO:0003712;transcription cofactor activity;2.26498037642844e-11!GO:0008565;protein transporter activity;2.28124517018869e-11!GO:0006732;coenzyme metabolic process;2.84014773790652e-11!GO:0006446;regulation of translational initiation;3.55420191070629e-11!GO:0051028;mRNA transport;4.25969500442501e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.72712953533361e-11!GO:0042773;ATP synthesis coupled electron transport;4.72712953533361e-11!GO:0030964;NADH dehydrogenase complex (quinone);7.48896990948956e-11!GO:0045271;respiratory chain complex I;7.48896990948956e-11!GO:0005747;mitochondrial respiratory chain complex I;7.48896990948956e-11!GO:0008270;zinc ion binding;8.68708953052644e-11!GO:0031497;chromatin assembly;9.59638968878418e-11!GO:0016881;acid-amino acid ligase activity;1.37818144139104e-10!GO:0048193;Golgi vesicle transport;1.41702271348362e-10!GO:0006334;nucleosome assembly;2.19214969784683e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.30169564751668e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.63629219779176e-10!GO:0065007;biological regulation;3.59563151763241e-10!GO:0043566;structure-specific DNA binding;3.98021465696952e-10!GO:0005813;centrosome;7.92409321908681e-10!GO:0000775;chromosome, pericentric region;8.91897399241446e-10!GO:0009259;ribonucleotide metabolic process;9.65736166309437e-10!GO:0006163;purine nucleotide metabolic process;1.10167936901747e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.31033460805177e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.45721934203592e-09!GO:0008033;tRNA processing;1.60626815159287e-09!GO:0031324;negative regulation of cellular metabolic process;1.91096835737619e-09!GO:0016568;chromatin modification;2.01422974191838e-09!GO:0051188;cofactor biosynthetic process;2.12173481529419e-09!GO:0012501;programmed cell death;2.12776977131033e-09!GO:0006915;apoptosis;2.38391654002339e-09!GO:0005815;microtubule organizing center;2.75156267344808e-09!GO:0005819;spindle;3.38916630360286e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.79519630705008e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.59164705873056e-09!GO:0016740;transferase activity;4.89651089654667e-09!GO:0044432;endoplasmic reticulum part;5.45895270177868e-09!GO:0006461;protein complex assembly;5.86484183796692e-09!GO:0006164;purine nucleotide biosynthetic process;7.68036126231514e-09!GO:0051329;interphase of mitotic cell cycle;7.69382292381605e-09!GO:0005667;transcription factor complex;8.01914583718984e-09!GO:0016564;transcription repressor activity;8.93492946404801e-09!GO:0048770;pigment granule;1.12857398645597e-08!GO:0042470;melanosome;1.12857398645597e-08!GO:0009150;purine ribonucleotide metabolic process;1.27044354682082e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.43705033613957e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.5737033325603e-08!GO:0005783;endoplasmic reticulum;1.62320620051481e-08!GO:0009260;ribonucleotide biosynthetic process;1.82591853724031e-08!GO:0000075;cell cycle checkpoint;2.38095858409752e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.82319983963409e-08!GO:0043623;cellular protein complex assembly;3.54991195493942e-08!GO:0007005;mitochondrion organization and biogenesis;3.72564493533419e-08!GO:0009108;coenzyme biosynthetic process;3.74060648973107e-08!GO:0051325;interphase;4.01827610337547e-08!GO:0046914;transition metal ion binding;4.37468010932578e-08!GO:0008094;DNA-dependent ATPase activity;4.70223287411282e-08!GO:0003697;single-stranded DNA binding;5.49470180343615e-08!GO:0008219;cell death;6.53753781404167e-08!GO:0016265;death;6.53753781404167e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.01581083845105e-08!GO:0048523;negative regulation of cellular process;8.42697709928263e-08!GO:0009892;negative regulation of metabolic process;8.53742387882526e-08!GO:0009199;ribonucleoside triphosphate metabolic process;8.65216656273562e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.81474899756942e-08!GO:0015986;ATP synthesis coupled proton transport;9.11702719302718e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.11702719302718e-08!GO:0005794;Golgi apparatus;1.11957145382849e-07!GO:0003899;DNA-directed RNA polymerase activity;1.28085571811531e-07!GO:0009141;nucleoside triphosphate metabolic process;1.3016862376141e-07!GO:0000245;spliceosome assembly;1.35429162489109e-07!GO:0051170;nuclear import;1.45834706292596e-07!GO:0006606;protein import into nucleus;1.49604211794536e-07!GO:0016563;transcription activator activity;1.59013748301668e-07!GO:0003724;RNA helicase activity;1.78951550795577e-07!GO:0051427;hormone receptor binding;1.84956523137885e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.92540828822612e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.92540828822612e-07!GO:0009055;electron carrier activity;2.04616032612493e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.14034353020362e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.14034353020362e-07!GO:0032446;protein modification by small protein conjugation;2.14933554235941e-07!GO:0006302;double-strand break repair;2.1960286021856e-07!GO:0045786;negative regulation of progression through cell cycle;2.37771761148212e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.93697788797389e-07!GO:0016567;protein ubiquitination;3.08452571932554e-07!GO:0007051;spindle organization and biogenesis;3.22386146917672e-07!GO:0005657;replication fork;3.77640208802105e-07!GO:0044452;nucleolar part;4.50236902545871e-07!GO:0035257;nuclear hormone receptor binding;4.68434524591307e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.94185222509021e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.94185222509021e-07!GO:0016192;vesicle-mediated transport;5.49263252419091e-07!GO:0005762;mitochondrial large ribosomal subunit;5.70252022043228e-07!GO:0000315;organellar large ribosomal subunit;5.70252022043228e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.08129319130322e-07!GO:0016363;nuclear matrix;6.46202513048297e-07!GO:0006793;phosphorus metabolic process;6.462964398507e-07!GO:0006796;phosphate metabolic process;6.462964398507e-07!GO:0004527;exonuclease activity;6.96683246355715e-07!GO:0051052;regulation of DNA metabolic process;7.47196035346415e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.47196035346415e-07!GO:0000079;regulation of cyclin-dependent protein kinase activity;7.62820713308266e-07!GO:0016481;negative regulation of transcription;8.05175966944632e-07!GO:0006310;DNA recombination;8.44934574729508e-07!GO:0003714;transcription corepressor activity;9.2186163493725e-07!GO:0009117;nucleotide metabolic process;1.0180445552866e-06!GO:0006752;group transfer coenzyme metabolic process;1.0195663956162e-06!GO:0042981;regulation of apoptosis;1.0195663956162e-06!GO:0003678;DNA helicase activity;1.11984853188898e-06!GO:0005789;endoplasmic reticulum membrane;1.24482209965643e-06!GO:0005768;endosome;1.2680275486477e-06!GO:0046034;ATP metabolic process;1.39301150092479e-06!GO:0016741;transferase activity, transferring one-carbon groups;1.46975811709658e-06!GO:0009056;catabolic process;1.51144810134169e-06!GO:0043067;regulation of programmed cell death;1.62163642368219e-06!GO:0008168;methyltransferase activity;1.71442241507271e-06!GO:0005874;microtubule;1.72549038159418e-06!GO:0008654;phospholipid biosynthetic process;1.75444912427599e-06!GO:0019829;cation-transporting ATPase activity;1.85814882838152e-06!GO:0006754;ATP biosynthetic process;3.16065907450433e-06!GO:0006753;nucleoside phosphate metabolic process;3.16065907450433e-06!GO:0007088;regulation of mitosis;3.73636521477188e-06!GO:0003690;double-stranded DNA binding;4.17091999441039e-06!GO:0051168;nuclear export;4.41585476079955e-06!GO:0000049;tRNA binding;4.67070327310026e-06!GO:0048519;negative regulation of biological process;4.7413648208312e-06!GO:0007017;microtubule-based process;5.1743299677395e-06!GO:0003684;damaged DNA binding;6.14214451225476e-06!GO:0000786;nucleosome;6.24129591356797e-06!GO:0045259;proton-transporting ATP synthase complex;7.07959135256841e-06!GO:0004518;nuclease activity;7.09841609241882e-06!GO:0016310;phosphorylation;7.79139425452167e-06!GO:0005793;ER-Golgi intermediate compartment;1.01597386424674e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.04456206982765e-05!GO:0003682;chromatin binding;1.05272032612779e-05!GO:0000059;protein import into nucleus, docking;1.05895791406821e-05!GO:0003713;transcription coactivator activity;1.11839000181761e-05!GO:0008186;RNA-dependent ATPase activity;1.15313461927933e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.23592908125463e-05!GO:0009060;aerobic respiration;1.55977554367593e-05!GO:0006383;transcription from RNA polymerase III promoter;1.59329739681049e-05!GO:0006916;anti-apoptosis;1.84332750721538e-05!GO:0016853;isomerase activity;2.22154844601686e-05!GO:0005525;GTP binding;2.47834220303924e-05!GO:0030880;RNA polymerase complex;2.70577854544821e-05!GO:0000151;ubiquitin ligase complex;2.82673901968633e-05!GO:0007059;chromosome segregation;2.82673901968633e-05!GO:0045333;cellular respiration;3.24492567790475e-05!GO:0045892;negative regulation of transcription, DNA-dependent;3.28618922283953e-05!GO:0048475;coated membrane;3.53976887981037e-05!GO:0030117;membrane coat;3.53976887981037e-05!GO:0004004;ATP-dependent RNA helicase activity;3.71086901510701e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.88051931243606e-05!GO:0019783;small conjugating protein-specific protease activity;4.28087389650999e-05!GO:0043069;negative regulation of programmed cell death;4.90421725967691e-05!GO:0051246;regulation of protein metabolic process;5.12729853551805e-05!GO:0006352;transcription initiation;5.31744488566397e-05!GO:0045941;positive regulation of transcription;5.31744488566397e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.48117691663535e-05!GO:0004674;protein serine/threonine kinase activity;5.56474106848117e-05!GO:0004843;ubiquitin-specific protease activity;5.56661877006507e-05!GO:0043021;ribonucleoprotein binding;5.9181227532083e-05!GO:0043066;negative regulation of apoptosis;6.01479448887048e-05!GO:0044440;endosomal part;6.37193214564007e-05!GO:0010008;endosome membrane;6.37193214564007e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;6.61822254891805e-05!GO:0016859;cis-trans isomerase activity;6.77787735807774e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.82987903272707e-05!GO:0055029;nuclear DNA-directed RNA polymerase complex;7.66670450854352e-05!GO:0000428;DNA-directed RNA polymerase complex;7.66670450854352e-05!GO:0032200;telomere organization and biogenesis;7.70858193922908e-05!GO:0000723;telomere maintenance;7.70858193922908e-05!GO:0006099;tricarboxylic acid cycle;8.82386475227269e-05!GO:0046356;acetyl-CoA catabolic process;8.82386475227269e-05!GO:0000314;organellar small ribosomal subunit;9.06101372188198e-05!GO:0005763;mitochondrial small ribosomal subunit;9.06101372188198e-05!GO:0005839;proteasome core complex (sensu Eukaryota);9.08179553908566e-05!GO:0006414;translational elongation;9.89048495690835e-05!GO:0006626;protein targeting to mitochondrion;0.000102804815506025!GO:0007093;mitotic cell cycle checkpoint;0.000102804815506025!GO:0016787;hydrolase activity;0.000105967432970405!GO:0030120;vesicle coat;0.000113708669279522!GO:0030662;coated vesicle membrane;0.000113708669279522!GO:0006084;acetyl-CoA metabolic process;0.000114121952761297!GO:0003702;RNA polymerase II transcription factor activity;0.000114424606994165!GO:0007052;mitotic spindle organization and biogenesis;0.000115855623299264!GO:0032508;DNA duplex unwinding;0.000120654508077903!GO:0032392;DNA geometric change;0.000120654508077903!GO:0005770;late endosome;0.00013257564251484!GO:0004221;ubiquitin thiolesterase activity;0.000135006771291184!GO:0000776;kinetochore;0.000146569868270641!GO:0006613;cotranslational protein targeting to membrane;0.00015874920364809!GO:0003924;GTPase activity;0.000168010419158052!GO:0043681;protein import into mitochondrion;0.000175793452136145!GO:0042770;DNA damage response, signal transduction;0.000191870639849421!GO:0046489;phosphoinositide biosynthetic process;0.000205506211580739!GO:0009451;RNA modification;0.00020785582422194!GO:0031570;DNA integrity checkpoint;0.000238216142785278!GO:0032561;guanyl ribonucleotide binding;0.000241305373605936!GO:0019001;guanyl nucleotide binding;0.000241305373605936!GO:0048471;perinuclear region of cytoplasm;0.000245588059949023!GO:0006275;regulation of DNA replication;0.000252900288989376!GO:0015631;tubulin binding;0.000258171102143826!GO:0006401;RNA catabolic process;0.000272047358014994!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000282973674461236!GO:0046474;glycerophospholipid biosynthetic process;0.000286746660068657!GO:0045893;positive regulation of transcription, DNA-dependent;0.000333670507597319!GO:0000781;chromosome, telomeric region;0.000343236214803929!GO:0006402;mRNA catabolic process;0.000356049283885443!GO:0004298;threonine endopeptidase activity;0.000356304514071768!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000374984495646517!GO:0006839;mitochondrial transport;0.000377551549155019!GO:0006289;nucleotide-excision repair;0.00041427766392645!GO:0006520;amino acid metabolic process;0.000415316123658783!GO:0051053;negative regulation of DNA metabolic process;0.000428042531053342!GO:0032259;methylation;0.000432120565481224!GO:0003729;mRNA binding;0.00046468114399939!GO:0005048;signal sequence binding;0.000478162169693397!GO:0009109;coenzyme catabolic process;0.000483298113876541!GO:0006268;DNA unwinding during replication;0.000515706998515452!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000538637164766161!GO:0006611;protein export from nucleus;0.000572656424134619!GO:0046467;membrane lipid biosynthetic process;0.000577085440762853!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000577968744171079!GO:0009165;nucleotide biosynthetic process;0.000609992138970276!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000635070602084025!GO:0040029;regulation of gene expression, epigenetic;0.000636356414522441!GO:0004532;exoribonuclease activity;0.000680894710742388!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.000680894710742388!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000681928082780953!GO:0006400;tRNA modification;0.000704641846539368!GO:0016790;thiolester hydrolase activity;0.000816168096241527!GO:0005769;early endosome;0.000841437801626046!GO:0051187;cofactor catabolic process;0.000847158984779719!GO:0008408;3'-5' exonuclease activity;0.00086979084005929!GO:0007050;cell cycle arrest;0.000896228144078605!GO:0045454;cell redox homeostasis;0.000901723198557021!GO:0035258;steroid hormone receptor binding;0.000904432506910395!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.000939162565851191!GO:0051920;peroxiredoxin activity;0.000942285528037575!GO:0006270;DNA replication initiation;0.000960344789519793!GO:0000922;spindle pole;0.000995010490286679!GO:0000228;nuclear chromosome;0.00100876320782154!GO:0006612;protein targeting to membrane;0.00103963614422327!GO:0046966;thyroid hormone receptor binding;0.00105686880712634!GO:0005798;Golgi-associated vesicle;0.0011541394380086!GO:0007006;mitochondrial membrane organization and biogenesis;0.00115505137959654!GO:0006405;RNA export from nucleus;0.00116153868802526!GO:0008022;protein C-terminus binding;0.00121368358965803!GO:0051087;chaperone binding;0.00121451576540096!GO:0005684;U2-dependent spliceosome;0.00123988001488123!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00132030036618969!GO:0008139;nuclear localization sequence binding;0.00132781826452534!GO:0000086;G2/M transition of mitotic cell cycle;0.00133943646285685!GO:0000082;G1/S transition of mitotic cell cycle;0.00138874192144278!GO:0006284;base-excision repair;0.00155925717837693!GO:0019899;enzyme binding;0.00155925717837693!GO:0005788;endoplasmic reticulum lumen;0.00160230879802096!GO:0007004;telomere maintenance via telomerase;0.00160748271369153!GO:0003711;transcription elongation regulator activity;0.00162847563452505!GO:0004003;ATP-dependent DNA helicase activity;0.00165873389089626!GO:0000077;DNA damage checkpoint;0.00166004133200893!GO:0006730;one-carbon compound metabolic process;0.00166004133200893!GO:0043414;biopolymer methylation;0.00170813041383047!GO:0030867;rough endoplasmic reticulum membrane;0.00174971227866581!GO:0000178;exosome (RNase complex);0.00199075076388824!GO:0000792;heterochromatin;0.0020477569711719!GO:0000725;recombinational repair;0.00212379778036885!GO:0000724;double-strand break repair via homologous recombination;0.00212379778036885!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00217413546783378!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00220914360517573!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00220914360517573!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00220914360517573!GO:0030521;androgen receptor signaling pathway;0.00226720076191748!GO:0048487;beta-tubulin binding;0.00230589165055574!GO:0016251;general RNA polymerase II transcription factor activity;0.00232487776969007!GO:0005876;spindle microtubule;0.00237972007928398!GO:0000096;sulfur amino acid metabolic process;0.00262230361805639!GO:0008250;oligosaccharyl transferase complex;0.00262230361805639!GO:0000209;protein polyubiquitination;0.00273207161109851!GO:0051789;response to protein stimulus;0.00278246359720604!GO:0006986;response to unfolded protein;0.00278246359720604!GO:0008156;negative regulation of DNA replication;0.00284756662706394!GO:0005637;nuclear inner membrane;0.0028519818912702!GO:0044450;microtubule organizing center part;0.00303604886382006!GO:0000175;3'-5'-exoribonuclease activity;0.00322284535109454!GO:0000819;sister chromatid segregation;0.00322885593846867!GO:0006144;purine base metabolic process;0.00327412956344532!GO:0051540;metal cluster binding;0.00328975070443919!GO:0051536;iron-sulfur cluster binding;0.00328975070443919!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00330569270909654!GO:0000097;sulfur amino acid biosynthetic process;0.00330569270909654!GO:0009116;nucleoside metabolic process;0.00343374118870558!GO:0043596;nuclear replication fork;0.00347456466231746!GO:0048500;signal recognition particle;0.00352854654252526!GO:0006891;intra-Golgi vesicle-mediated transport;0.00356768056297843!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00357620665472852!GO:0005669;transcription factor TFIID complex;0.00375838469854119!GO:0042393;histone binding;0.00385832889730859!GO:0008652;amino acid biosynthetic process;0.00390787470046637!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0039556527422691!GO:0006278;RNA-dependent DNA replication;0.00403497999536323!GO:0008017;microtubule binding;0.00419993902005008!GO:0008312;7S RNA binding;0.00426565577597201!GO:0019843;rRNA binding;0.00426918959070295!GO:0051059;NF-kappaB binding;0.0043239490111082!GO:0007010;cytoskeleton organization and biogenesis;0.00433105933900748!GO:0003887;DNA-directed DNA polymerase activity;0.0043840496552111!GO:0044431;Golgi apparatus part;0.00443514837734543!GO:0030118;clathrin coat;0.00452207181359635!GO:0000070;mitotic sister chromatid segregation;0.00453711568870046!GO:0031072;heat shock protein binding;0.00455329273492848!GO:0051252;regulation of RNA metabolic process;0.0047104101715495!GO:0016272;prefoldin complex;0.00475111634820164!GO:0006506;GPI anchor biosynthetic process;0.00494438187219416!GO:0001824;blastocyst development;0.00496245072592043!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00509569821238844!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00527446449056092!GO:0015399;primary active transmembrane transporter activity;0.00527446449056092!GO:0016584;nucleosome positioning;0.00547560675795428!GO:0007021;tubulin folding;0.00581880996295249!GO:0004576;oligosaccharyl transferase activity;0.00586680465922173!GO:0006505;GPI anchor metabolic process;0.00628226069200032!GO:0046983;protein dimerization activity;0.00639693134955346!GO:0018196;peptidyl-asparagine modification;0.00639693134955346!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00639693134955346!GO:0005732;small nucleolar ribonucleoprotein complex;0.00692782197326955!GO:0005832;chaperonin-containing T-complex;0.00709488657611078!GO:0006497;protein amino acid lipidation;0.00713224393292396!GO:0031124;mRNA 3'-end processing;0.0071574247157263!GO:0003746;translation elongation factor activity;0.00730750616587635!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00736092832776883!GO:0008632;apoptotic program;0.00737249698802929!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0076376167526409!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00769590463755403!GO:0009112;nucleobase metabolic process;0.00781565653947378!GO:0033673;negative regulation of kinase activity;0.00781565653947378!GO:0006469;negative regulation of protein kinase activity;0.00781565653947378!GO:0006595;polyamine metabolic process;0.00809360446573188!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00811192093770606!GO:0043065;positive regulation of apoptosis;0.00831039259534355!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00845111727502406!GO:0000152;nuclear ubiquitin ligase complex;0.00883079865517932!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00888428256051902!GO:0043022;ribosome binding;0.00896917166365708!GO:0008173;RNA methyltransferase activity;0.00913739880474362!GO:0006376;mRNA splice site selection;0.00931000151561916!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00931000151561916!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00939404103368492!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00939829086928459!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00962084618675403!GO:0048522;positive regulation of cellular process;0.00963498053998438!GO:0045045;secretory pathway;0.00977313014843541!GO:0006650;glycerophospholipid metabolic process;0.00978253796033338!GO:0006338;chromatin remodeling;0.00990135958489172!GO:0046483;heterocycle metabolic process;0.0101179357579098!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0101669118446804!GO:0016407;acetyltransferase activity;0.0101713649000467!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0103589659335654!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0103589659335654!GO:0030384;phosphoinositide metabolic process;0.0104322469641015!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0107078841089717!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0107078841089717!GO:0045047;protein targeting to ER;0.0107078841089717!GO:0046426;negative regulation of JAK-STAT cascade;0.0107470044884853!GO:0033116;ER-Golgi intermediate compartment membrane;0.0107560215602735!GO:0042802;identical protein binding;0.0107629088380001!GO:0051539;4 iron, 4 sulfur cluster binding;0.0107866603523475!GO:0006519;amino acid and derivative metabolic process;0.010978073844605!GO:0008180;signalosome;0.0111966054749019!GO:0031252;leading edge;0.0113182137945829!GO:0032507;maintenance of cellular protein localization;0.0116038934414906!GO:0031902;late endosome membrane;0.0116287597657943!GO:0043068;positive regulation of programmed cell death;0.0119269413884618!GO:0008234;cysteine-type peptidase activity;0.0121227796600904!GO:0051348;negative regulation of transferase activity;0.0121596267348567!GO:0050681;androgen receptor binding;0.0122381896495553!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0123407056528334!GO:0000910;cytokinesis;0.0124196841510238!GO:0009396;folic acid and derivative biosynthetic process;0.0129420568877699!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0131497047959605!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0132615879226603!GO:0065009;regulation of a molecular function;0.0134801301431642!GO:0031577;spindle checkpoint;0.0137495577542841!GO:0008287;protein serine/threonine phosphatase complex;0.013771137867231!GO:0001522;pseudouridine synthesis;0.0139291852165795!GO:0030518;steroid hormone receptor signaling pathway;0.0142732399282323!GO:0000018;regulation of DNA recombination;0.0143074670743568!GO:0043130;ubiquitin binding;0.014590666015473!GO:0032182;small conjugating protein binding;0.014590666015473!GO:0006406;mRNA export from nucleus;0.0146821081032388!GO:0043601;nuclear replisome;0.0147868582288148!GO:0030894;replisome;0.0147868582288148!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0148092589608801!GO:0009615;response to virus;0.0150550156551058!GO:0003725;double-stranded RNA binding;0.0150846345130327!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0151480398191535!GO:0000930;gamma-tubulin complex;0.0152021103365226!GO:0008610;lipid biosynthetic process;0.0152691699159237!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0152854418310628!GO:0031123;RNA 3'-end processing;0.0154805697439937!GO:0044454;nuclear chromosome part;0.0154805697439937!GO:0008276;protein methyltransferase activity;0.0154960617167997!GO:0046982;protein heterodimerization activity;0.0162964585171972!GO:0009303;rRNA transcription;0.0164506777515093!GO:0005869;dynactin complex;0.0165529957385161!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0165529957385161!GO:0055083;monovalent inorganic anion homeostasis;0.0165529957385161!GO:0055064;chloride ion homeostasis;0.0165529957385161!GO:0030644;cellular chloride ion homeostasis;0.0165529957385161!GO:0006541;glutamine metabolic process;0.0166781040698874!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0166781040698874!GO:0010257;NADH dehydrogenase complex assembly;0.0166781040698874!GO:0033108;mitochondrial respiratory chain complex assembly;0.0166781040698874!GO:0016126;sterol biosynthetic process;0.016725555311814!GO:0006417;regulation of translation;0.0171399000627114!GO:0007346;regulation of progression through mitotic cell cycle;0.0175344761608669!GO:0005666;DNA-directed RNA polymerase III complex;0.0175433631589593!GO:0030132;clathrin coat of coated pit;0.0175922068431866!GO:0007243;protein kinase cascade;0.017801017425624!GO:0042158;lipoprotein biosynthetic process;0.0181264622055092!GO:0030176;integral to endoplasmic reticulum membrane;0.0181447996135245!GO:0016197;endosome transport;0.0188324824523199!GO:0006220;pyrimidine nucleotide metabolic process;0.0189068666544527!GO:0005680;anaphase-promoting complex;0.0189167225999321!GO:0045936;negative regulation of phosphate metabolic process;0.0190706889532988!GO:0031982;vesicle;0.0192134408154034!GO:0016579;protein deubiquitination;0.0195756444205945!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0196220498060521!GO:0005905;coated pit;0.0199211979356661!GO:0005663;DNA replication factor C complex;0.0200998471276981!GO:0004680;casein kinase activity;0.0214596707260857!GO:0008538;proteasome activator activity;0.0216602315500662!GO:0000726;non-recombinational repair;0.0218077938195345!GO:0004523;ribonuclease H activity;0.0221589448817348!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0222450816597416!GO:0045039;protein import into mitochondrial inner membrane;0.0222450816597416!GO:0031901;early endosome membrane;0.0223870288168801!GO:0051297;centrosome organization and biogenesis;0.0225161358114519!GO:0031023;microtubule organizing center organization and biogenesis;0.0225161358114519!GO:0017056;structural constituent of nuclear pore;0.0228509678187879!GO:0009124;nucleoside monophosphate biosynthetic process;0.0228871222104086!GO:0009123;nucleoside monophosphate metabolic process;0.0228871222104086!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.023110083102207!GO:0015002;heme-copper terminal oxidase activity;0.023110083102207!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.023110083102207!GO:0004129;cytochrome-c oxidase activity;0.023110083102207!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0235288546851851!GO:0030658;transport vesicle membrane;0.0236982196563297!GO:0031968;organelle outer membrane;0.024030342299852!GO:0007018;microtubule-based movement;0.0240434962699094!GO:0006607;NLS-bearing substrate import into nucleus;0.0242347900393575!GO:0019867;outer membrane;0.0243214001644189!GO:0042326;negative regulation of phosphorylation;0.0243935691969506!GO:0005658;alpha DNA polymerase:primase complex;0.0247513599517762!GO:0046128;purine ribonucleoside metabolic process;0.0247513599517762!GO:0042278;purine nucleoside metabolic process;0.0247513599517762!GO:0004540;ribonuclease activity;0.0248966873444416!GO:0016408;C-acyltransferase activity;0.0249027074712713!GO:0016417;S-acyltransferase activity;0.0249534482439498!GO:0009070;serine family amino acid biosynthetic process;0.0249534482439498!GO:0019887;protein kinase regulator activity;0.0251945495027449!GO:0031410;cytoplasmic vesicle;0.0251959395544038!GO:0001832;blastocyst growth;0.0253289465790607!GO:0043284;biopolymer biosynthetic process;0.0253289465790607!GO:0015980;energy derivation by oxidation of organic compounds;0.0255297450195094!GO:0008536;Ran GTPase binding;0.0258920724500033!GO:0007098;centrosome cycle;0.0260939823905778!GO:0005758;mitochondrial intermembrane space;0.0261155502001725!GO:0006360;transcription from RNA polymerase I promoter;0.0262099894630545!GO:0008625;induction of apoptosis via death domain receptors;0.0262515473906235!GO:0051651;maintenance of cellular localization;0.0263762328487625!GO:0043488;regulation of mRNA stability;0.0263762328487625!GO:0043487;regulation of RNA stability;0.0263762328487625!GO:0006818;hydrogen transport;0.0269701015774598!GO:0008097;5S rRNA binding;0.0269701015774598!GO:0019238;cyclohydrolase activity;0.0269701015774598!GO:0005875;microtubule associated complex;0.0270657949046026!GO:0015992;proton transport;0.0272051793098139!GO:0008361;regulation of cell size;0.0280426164382007!GO:0005652;nuclear lamina;0.0283742648631106!GO:0030515;snoRNA binding;0.0284778450748886!GO:0050178;phenylpyruvate tautomerase activity;0.0285552482756074!GO:0042769;DNA damage response, detection of DNA damage;0.0286931595421754!GO:0006695;cholesterol biosynthetic process;0.0292625297444064!GO:0000738;DNA catabolic process, exonucleolytic;0.0297270643583885!GO:0022884;macromolecule transmembrane transporter activity;0.0299784899583797!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0299784899583797!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0300267806465873!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0300267806465873!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0300267806465873!GO:0051338;regulation of transferase activity;0.0301877698290054!GO:0043549;regulation of kinase activity;0.0310666253219991!GO:0051098;regulation of binding;0.0312697666084891!GO:0008320;protein transmembrane transporter activity;0.0314494168089613!GO:0030174;regulation of DNA replication initiation;0.0314541853304417!GO:0005881;cytoplasmic microtubule;0.0315575967185088!GO:0000387;spliceosomal snRNP biogenesis;0.0315575967185088!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0315688501984301!GO:0016301;kinase activity;0.031659911349394!GO:0016311;dephosphorylation;0.0324961318806945!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0327003414873191!GO:0000139;Golgi membrane;0.0327105375774704!GO:0019752;carboxylic acid metabolic process;0.0332632867542763!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0332632867542763!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0332632867542763!GO:0043433;negative regulation of transcription factor activity;0.0334806538021619!GO:0006892;post-Golgi vesicle-mediated transport;0.0338289918967728!GO:0006564;L-serine biosynthetic process;0.034298161770065!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0344710712467217!GO:0043624;cellular protein complex disassembly;0.0355175706488056!GO:0030911;TPR domain binding;0.0355209829180158!GO:0000287;magnesium ion binding;0.0360120612717172!GO:0032039;integrator complex;0.0360591532090621!GO:0003923;GPI-anchor transamidase activity;0.0362688154033819!GO:0016255;attachment of GPI anchor to protein;0.0362688154033819!GO:0042765;GPI-anchor transamidase complex;0.0362688154033819!GO:0008629;induction of apoptosis by intracellular signals;0.036339084226465!GO:0030508;thiol-disulfide exchange intermediate activity;0.0364677748392078!GO:0006082;organic acid metabolic process;0.0366845261802272!GO:0005741;mitochondrial outer membrane;0.0369338127542683!GO:0031988;membrane-bound vesicle;0.0371699038743456!GO:0030137;COPI-coated vesicle;0.0379951989506869!GO:0016049;cell growth;0.0381152995814011!GO:0035267;NuA4 histone acetyltransferase complex;0.0381889110192889!GO:0050662;coenzyme binding;0.0386267772162658!GO:0031970;organelle envelope lumen;0.0386645639689735!GO:0030663;COPI coated vesicle membrane;0.0388715211331761!GO:0030126;COPI vesicle coat;0.0388715211331761!GO:0030131;clathrin adaptor complex;0.0389719306897894!GO:0030433;ER-associated protein catabolic process;0.0389873734009175!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0389873734009175!GO:0008637;apoptotic mitochondrial changes;0.0392334285823163!GO:0016788;hydrolase activity, acting on ester bonds;0.0392560984753743!GO:0007569;cell aging;0.039423538019255!GO:0030496;midbody;0.0403537107502179!GO:0006013;mannose metabolic process;0.0403537107502179!GO:0006661;phosphatidylinositol biosynthetic process;0.0403783867962928!GO:0009161;ribonucleoside monophosphate metabolic process;0.0407992068118294!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0407992068118294!GO:0045859;regulation of protein kinase activity;0.0410945757303009!GO:0030119;AP-type membrane coat adaptor complex;0.0410945757303009!GO:0050811;GABA receptor binding;0.0415878789168757!GO:0030503;regulation of cell redox homeostasis;0.0417343912679555!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0419088767870951!GO:0000339;RNA cap binding;0.0423532028768454!GO:0030660;Golgi-associated vesicle membrane;0.0424257246607379!GO:0051287;NAD binding;0.0430078170643136!GO:0030134;ER to Golgi transport vesicle;0.0436479295563365!GO:0006378;mRNA polyadenylation;0.0437219382240765!GO:0006917;induction of apoptosis;0.0440824990791846!GO:0031529;ruffle organization and biogenesis;0.0449280982267269!GO:0043407;negative regulation of MAP kinase activity;0.0452270606789044!GO:0051320;S phase;0.0452270606789044!GO:0030145;manganese ion binding;0.0453037695333263!GO:0030125;clathrin vesicle coat;0.0453866093953901!GO:0030665;clathrin coated vesicle membrane;0.0453866093953901!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0454044066110371!GO:0006091;generation of precursor metabolites and energy;0.0458111846655361!GO:0016023;cytoplasmic membrane-bound vesicle;0.0458368317048766!GO:0043492;ATPase activity, coupled to movement of substances;0.0459662873430769!GO:0033205;cytokinesis during cell cycle;0.0462844463938218!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.046384403673381!GO:0044438;microbody part;0.0465736483564673!GO:0044439;peroxisomal part;0.0465736483564673!GO:0000123;histone acetyltransferase complex;0.0472793191512614!GO:0045185;maintenance of protein localization;0.0473427464583562!GO:0007025;beta-tubulin folding;0.04758014892802!GO:0000790;nuclear chromatin;0.0482244725000988!GO:0004659;prenyltransferase activity;0.0482684821228483!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0485895308678341!GO:0022406;membrane docking;0.0488995463474372!GO:0048278;vesicle docking;0.0488995463474372!GO:0050000;chromosome localization;0.0490431310267595!GO:0051303;establishment of chromosome localization;0.0490431310267595!GO:0031326;regulation of cellular biosynthetic process;0.0493568002582473!GO:0001836;release of cytochrome c from mitochondria;0.049932661143347!GO:0006368;RNA elongation from RNA polymerase II promoter;0.049932661143347!GO:0000793;condensed chromosome;0.049932661143347!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0499553267527588
|sample_id=10451
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=ZNF148:12.9174722064;NFIX:10.4661977566;ELK1,4_GABP{A,B1}:4.26892675928;NFY{A,B,C}:4.19957461269;ATF4:3.46529884941;STAT1,3:3.04089429242;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.81714809121;ZNF143:2.72670136976;NRF1:2.49182033983;YY1:2.42339114551;bHLH_family:2.39516656374;E2F1..5:2.05775412367;ATF2:1.9246730064;GFI1B:1.90947597376;JUN:1.67854612502;CREB1:1.67840144856;PBX1:1.67125262366;POU2F1..3:1.41216647319;RBPJ:1.34457119426;TFDP1:1.33068467675;MYB:1.29709353871;GFI1:1.23299005359;NFKB1_REL_RELA:1.12598005663;RFX1:0.900215217559;TBP:0.890876056262;IKZF1:0.824150160786;SOX{8,9,10}:0.794086796608;HOX{A6,A7,B6,B7}:0.782277075822;BREu{core}:0.765106893719;FOXN1:0.763372143624;ATF5_CREB3:0.751416672243;HIF1A:0.716504725014;EN1,2:0.573027510778;HOXA9_MEIS1:0.555280629835;BACH2:0.526496115491;IRF7:0.499615550384;ELF1,2,4:0.474506756084;ZEB1:0.40303227278;AHR_ARNT_ARNT2:0.355505162223;XCPE1{core}:0.319183647143;LMO2:0.317503019405;TFAP2B:0.301615971266;GTF2A1,2:0.29193794353;ESR1:0.266965388789;STAT5{A,B}:0.231739829708;PAX3,7:0.220342013973;NFE2:0.214548593451;NANOG:0.197722147053;SNAI1..3:0.18411921827;PRRX1,2:0.17342325524;FOS_FOS{B,L1}_JUN{B,D}:0.170410041487;MED-1{core}:0.161059679489;CEBPA,B_DDIT3:0.159100314289;REST:0.147604137919;LHX3,4:0.082227341347;PAX2:0.0760221582846;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0698871584706;ONECUT1,2:0.0611393147435;MYOD1:0.0431110456322;GZF1:0.0396854227304;EGR1..3:0.0362707362757;HIC1:0.0323745800729;MAFB:0.0216342479431;RXR{A,B,G}:0.0193607998077;RFX2..5_RFXANK_RFXAP:0.00423891432084;SP1:-0.000613637575182;T:-0.0113729093737;EVI1:-0.0374745148531;TP53:-0.0474409764761;ADNP_IRX_SIX_ZHX:-0.0639705842694;FOXP1:-0.111809574699;CDC5L:-0.118375170746;NR5A1,2:-0.12752618457;NKX2-1,4:-0.14314216199;HOX{A4,D4}:-0.164282042215;XBP1:-0.165237932567;NKX2-3_NKX2-5:-0.166322745934;PAX5:-0.170172496983;CRX:-0.194973064884;SOX17:-0.217824924163;FOSL2:-0.226251354351;HLF:-0.234120569519;HBP1_HMGB_SSRP1_UBTF:-0.247790948218;FOX{F1,F2,J1}:-0.253603623307;IRF1,2:-0.281275995499;NFE2L1:-0.29013083546;FOXM1:-0.290952572401;POU6F1:-0.306436047086;HNF1A:-0.310382647653;ATF6:-0.312854692053;SREBF1,2:-0.313534920482;RORA:-0.33185612859;HES1:-0.336434794692;TGIF1:-0.379674165719;CUX2:-0.407958415319;MTE{core}:-0.42922109894;MEF2{A,B,C,D}:-0.435754468903;MZF1:-0.448702655987;NANOG{mouse}:-0.450559480912;MYFfamily:-0.458199288511;SPI1:-0.496793268675;ZFP161:-0.502545937339;ZNF423:-0.511499858927;FOXQ1:-0.512822454361;TBX4,5:-0.521586605461;FOXL1:-0.546214175833;POU1F1:-0.553539706753;ZBTB6:-0.55984915526;HNF4A_NR2F1,2:-0.56056954592;LEF1_TCF7_TCF7L1,2:-0.570655947843;PAX8:-0.575575515953;VSX1,2:-0.589183034826;ZBTB16:-0.596552439277;OCT4_SOX2{dimer}:-0.608603408074;GATA6:-0.655639785376;UFEwm:-0.66270866122;SPIB:-0.677697171238;TFAP2{A,C}:-0.683295196582;CDX1,2,4:-0.68408448269;FOXD3:-0.68909674456;PITX1..3:-0.700279671759;DBP:-0.710665430773;HOX{A5,B5}:-0.72454878645;TEF:-0.764294828218;PAX1,9:-0.813486485254;PATZ1:-0.820405913361;SOX5:-0.862675025583;SOX2:-0.863256349122;SRF:-0.889558207629;TLX1..3_NFIC{dimer}:-0.894962263241;NR6A1:-0.905854930302;FOXA2:-0.923704209537;FOX{D1,D2}:-0.926116046714;MYBL2:-0.928360208785;TEAD1:-0.93634169344;NHLH1,2:-0.937996324868;RUNX1..3:-0.952034710997;NFIL3:-0.952805894829;ETS1,2:-0.953454899359;PAX6:-0.999349217183;STAT2,4,6:-1.00417145109;DMAP1_NCOR{1,2}_SMARC:-1.02751238255;GTF2I:-1.04005032603;ARID5B:-1.07569804633;NFE2L2:-1.0926825025;PRDM1:-1.1007327989;POU3F1..4:-1.10721020364;NKX3-1:-1.13489611988;ZIC1..3:-1.14782845042;AR:-1.20978829639;MTF1:-1.2347988671;MAZ:-1.28274260684;FOXO1,3,4:-1.30598627843;ZNF384:-1.39141587267;TLX2:-1.39889532923;NKX6-1,2:-1.40743033612;EBF1:-1.41056462657;PPARG:-1.49300594329;HSF1,2:-1.52011397544;IKZF2:-1.53120162416;PAX4:-1.5329395278;NKX2-2,8:-1.55400791797;NKX3-2:-1.55857706645;TFAP4:-1.56935490438;ESRRA:-1.57311425509;POU5F1:-1.58860682929;AIRE:-1.64931932381;PDX1:-1.66088570642;GCM1,2:-1.67491018879;ALX1:-1.68429533969;ZNF238:-1.68484968854;GLI1..3:-1.68684535512;BPTF:-1.70139214871;TOPORS:-1.71204487613;FOX{I1,J2}:-1.7267491586;NR1H4:-1.75874424429;FOXP3:-1.77941265099;ALX4:-1.81000193669;EP300:-1.83033326701;RREB1:-1.89976228773;HAND1,2:-1.93002118538;TFCP2:-2.07374382483;NFATC1..3:-2.0741900734;GATA4:-2.16591415152;NR3C1:-2.25360241544;SPZ1:-2.26923395836;HMX1:-2.2933631642;TAL1_TCF{3,4,12}:-2.40199089259;SMAD1..7,9:-2.4960856002;KLF4:-2.50792212176;RXRA_VDR{dimer}:-2.92681503683;HMGA1,2:-2.9671952067
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10451-106G1;search_select_hide=table117:FF:10451-106G1
}}
}}

Latest revision as of 14:03, 3 June 2020

Name:embryonic kidney cell line: HEK293/SLAM infection, 24hr
Species:Human (Homo sapiens)
Library ID:CNhs11047
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeunclassifiable
cell lineHEK293/SLAM
companyNA
collaborationChieko Kai (University of Tokyo)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005447
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11047 CAGE DRX007870 DRR008742
Accession ID Hg19

Library idBAMCTSS
CNhs11047 DRZ000167 DRZ001552
Accession ID Hg38

Library idBAMCTSS
CNhs11047 DRZ011517 DRZ012902
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.62
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0608
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.0608
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.048
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.101
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.23
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma1.056
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0336
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.00904
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0608
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.717
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.114
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.127
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0608
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.644
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.227
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11047

Jaspar motifP-value
MA0002.20.0395
MA0003.10.173
MA0004.10.322
MA0006.10.877
MA0007.10.827
MA0009.10.64
MA0014.10.914
MA0017.10.0582
MA0018.20.00113
MA0019.10.253
MA0024.10.0035
MA0025.10.4
MA0027.10.568
MA0028.12.22641e-5
MA0029.10.00662
MA0030.10.992
MA0031.10.0494
MA0035.28.11438e-4
MA0038.10.0375
MA0039.20.137
MA0040.10.735
MA0041.10.465
MA0042.10.835
MA0043.10.0408
MA0046.10.688
MA0047.20.716
MA0048.10.383
MA0050.10.692
MA0051.10.0394
MA0052.10.812
MA0055.10.187
MA0057.10.295
MA0058.10.234
MA0059.10.481
MA0060.11.18898e-32
MA0061.10.852
MA0062.21.37747e-7
MA0065.20.114
MA0066.10.07
MA0067.10.274
MA0068.10.379
MA0069.10.84
MA0070.10.127
MA0071.10.499
MA0072.10.0119
MA0073.10.982
MA0074.10.507
MA0076.17.91304e-7
MA0077.10.919
MA0078.10.473
MA0079.20.0519
MA0080.20.0286
MA0081.10.862
MA0083.10.0184
MA0084.10.603
MA0087.10.553
MA0088.10.289
MA0090.10.242
MA0091.10.213
MA0092.10.162
MA0093.10.234
MA0099.20.644
MA0100.10.57
MA0101.10.167
MA0102.20.522
MA0103.10.574
MA0104.20.119
MA0105.10.0169
MA0106.10.431
MA0107.10.0959
MA0108.20.137
MA0111.10.36
MA0112.25.99671e-6
MA0113.10.253
MA0114.10.213
MA0115.10.84
MA0116.10.00239
MA0117.10.512
MA0119.10.0289
MA0122.10.702
MA0124.10.86
MA0125.10.647
MA0131.10.403
MA0135.10.393
MA0136.10.749
MA0137.20.69
MA0138.20.103
MA0139.10.954
MA0140.12.26295e-8
MA0141.10.151
MA0142.10.433
MA0143.10.303
MA0144.10.4
MA0145.10.3
MA0146.10.201
MA0147.10.198
MA0148.10.471
MA0149.10.927
MA0150.10.31
MA0152.10.56
MA0153.10.619
MA0154.10.0037
MA0155.10.17
MA0156.10.133
MA0157.10.00386
MA0159.10.264
MA0160.10.369
MA0162.10.179
MA0163.10.02
MA0164.10.699
MA0258.10.00144
MA0259.10.283



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11047

Novel motifP-value
10.266
100.608
1000.55
1010.576
1020.633
1030.67
1040.834
1050.648
1060.00621
1070.0503
1080.718
1090.682
110.159
1100.247
1110.701
1121.40966e-4
1130.447
1140.0889
1150.961
1160.346
1170.915
1180.0526
1190.435
120.743
1200.638
1210.75
1220.505
1230.294
1240.019
1250.916
1260.975
1270.681
1280.0844
1290.678
130.778
1308.41019e-4
1310.654
1320.671
1330.841
1340.572
1350.232
1360.113
1370.353
1380.195
1390.358
140.215
1400.576
1410.688
1420.833
1430.102
1440.529
1450.46
1460.735
1470.35
1480.464
1490.313
150.27
1500.831
1510.093
1520.392
1530.815
1540.327
1550.734
1560.754
1570.977
1580.477
1590.656
160.226
1600.112
1610.875
1620.886
1630.76
1643.82654e-7
1650.6
1660.529
1670.599
1680.506
1699.81638e-4
170.19
180.437
190.0825
20.105
200.195
210.53
220.143
230.00638
240.868
250.887
260.387
270.038
280.745
290.999
30.0878
300.555
310.594
320.0697
330.76
340.238
350.513
360.595
370.685
380.334
390.938
40.00121
400.996
410.72
420.553
430.447
440.421
450.545
460.0925
470.308
480.24
490.467
50.695
500.647
510.376
520.25
530.473
540.323
550.533
560.603
570.188
580.428
590.393
60.72
600.0933
610.967
620.149
630.085
640.275
650.127
661.78811e-12
670.835
680.876
690.913
70.694
700.51
710.281
720.396
730.452
740.558
750.843
760.951
770.051
780.912
790.529
80.073
800.339
810.314
820.144
830.384
840.649
850.0323
860.601
870.157
880.52
890.05
90.109
900.397
910.00791
920.203
930.663
940.0684
950.843
960.236
970.595
980.398
990.497



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11047


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002113 (kidney)
0002100 (trunk)
0000062 (organ)
0000475 (organism subdivision)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0005173 (abdominal segment element)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100067 (kidney cell line sample)
0102733 (embryonic kidney cell line sample)
0100669 (embryonic cell line sample)
0100007 (HEK-293 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0003104 (mesenchyme)
UBERON:0003918 (kidney mesenchyme)
UBERON:0007687 (kidney field)

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