FF:11609-120I7: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (23 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005741 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008320;DRR009192;DRZ000617;DRZ002002;DRZ011967;DRZ013352 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005389,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0010317,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000255,CL:0000306,CL:0002222,CL:0002224 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000085 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11609-120I7 | |id=FF:11609-120I7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000085 | ||
|is_obsolete= | |||
|library_id=CNhs12568 | |||
|library_id_phase_based=2:CNhs12568 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11609 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11609 | |||
|name=Lens Epithelial Cells, donor2 | |name=Lens Epithelial Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12568,LSID917,release011,COMPLETED | |profile_hcage=CNhs12568,LSID917,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.069000877539376,0.0476371106609188,-0.0762718696823314,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,-0.105685899687509,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,-0.110726369286027,0,0,0,0,0,0,0,0,0.0210657983510445,0,0.0130697214268016,0.0476371106609188,0.165458487625984,0,0.0838985000097947,0,-0.0969923612426051,0,0,-0.0497065165521781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0.0238185553304594,0,0,0,0,0.0476371106609188,0.0014746092548551,0.0238185553304594,0,0.0055236136556136,0.294563207630829,0.0404155745537284,0,0.129622621258172,0,0.0476371106609188,0.131283556388056,-0.114658645470436,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0938095785321705,-0.216391930154351,0,0,-0.0364132912814638,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.131283556388056,0,0.0476371106609188,0,0,0.0476371106609188,0,0.0476371106609188,0.0476371106609188,0.129622621258172,0,0,-0.0178599676598023,0.24479978840238,0.692633558655334,-0.143515142523472,0.0238185553304594,0,0.0961148039319257,0,0.310347787595302,0,0,0.0476371106609188,0.0476371106609188,0.0476371106609188,0,0.0476371106609188,0.0373386206734196,0,0.234569046026368,0.0238185553304594,0,0,0,0.0051932742466088,-0.21491059197065,0,0.114621631442809,-0.0683442610773682,0,0,0,0,-0.163692870190873,0,0.0445790038322437,-0.0827201683234173,0.781260322391365,0.324794631173486,-0.00807538612026315,0,0,0,0.197475795718094,-0.367303344352916,0,0,0.121900309770757,0.305649202896839,0,0,-0.106062983935951,1.22743587042111,0.138835130980863,0.0461080572465812,0,0,0,0,0,0,0.147540554442078,0,0,0.0476371106609188,0,0,0.165458487625984,0.285713761395139,0.223297117316726,0.0476371106609188,0.129622621258172,0.165458487625984,0,-0.0964985385952326,0.00281172036921079,0.0905616389277576,0.230311826017137,0.0262149041950059,0.0585159041328311,0.235610357311639,0.0630190184739565,0.218566241797254,0.0556149164123814,0.347573416736081,-0.0384412647334897,0.32547403418314,0.603589942373727,0.129622621258172,-0.024258900979705,0.32956286261172,0.114463952147469,0.00018570795802697,0.0328552889824003,0.0331628475005605,0.0272386501297277,0,0.437585067412616,0,0.0817115124279025,0.014702943262066,-0.024208835107179,-0.133088558693624,-0.0826284784574055,0.138605278826834,-0.0290804822487485,0.133078984223378,-0.0599437221678243,0.625034031278232,0.146161529077109,0.00395196833747335,0.257093738477441,0.218333325115822,0,0,0.212442749618739,0.046374508015422,-0.178241105766063,0.0197959594211062,0.0055236136556136,-0.0683442610773682,0.373003828872778,0.131367808450113,-0.025549469611341,0.198561428523759,0.053581548146473,-0.0892761554048177,0,0,0,0.0476371106609188,0.0905616389277576,0.135843863507933,-0.140321306424542,-0.0342941330317857,0.00539964103485,0.0835936862946209,-0.046062693071739,0.0283314659647249,0.00803080078457675,0.0931420565742198,-0.0554482585296366,0.198561428523759,0.117701676725346,0.0362866150613608,0.057024020567173,-0.438620453528614,0.00453107269010045,0.0331940384465381,0.922866544222377,-0.152712548591092,-0.104782669776622,-0.0027006130447238,-0.478592077194924,0.198561428523759,0.688937860249791,0.0476371106609188,-0.0981481518568823,-0.0759001496478203,0,0.140594787554913,0.0905616389277576,-0.00205991600928779,0,-0.144677675407488,0.00942903218290215,-0.137925902896967,-0.0509326760066459,0.138470010603953,-0.377698729205979,0.0476371106609188,0.0560955052300627,0.208671386006986,0.0905616389277576,0.103918539071421,0.0802929578402662,0.0476371106609188,0.385501306263527,-0.0246959946155618,0.126771550213396,0.217825672949693,0,0.0567751412756753,0,0.165458487625984,0.051477410898145,-0.00615713013862657,0,-0.0903133772107969,0.0743577081127373,0.235416002807916,0.013651547823238,0,0,0.385229290787706,0,0.0476371106609188,0.5969693501316,0.157823234285958,0.317303406013712,-0.162764702558998,-0.0031025797542108,0.520232860098379,0,0.129622621258172,-0.0479051447070036,0,0.2063629128929,0,0,0.379919937953486,-0.068991002329214,0,0.31399262047326,1.05818817733041,0,0,0,0.129622621258172,0,0,0,0.000882543077845875,-0.259926315261223,0.100755513621828,0,-0.108752454451899,0,0,0,0,0.0476371106609188,-0.0242913703004594,0.105546166766342,0,-0.661103076831915,0.154666649459514,-0.0753803050155014,0.0452808194638788,0,0,0,0.33456231144222,0.0260823455310384,0.0476371106609188,0.0335957811283526,0,0,0,0,-0.0385038791282925,0,0,0,0,-0.057730457053664,0.0629319764666194,0,0,0,-0.229317290940872,0.0476371106609188,0,0,0.0178010104097187,0.068016828714861,0,0.0476371106609188,0.333321341758249,0.00681578750966011,0.156545605504978,0.678323561485003,0.0476371106609188,-0.0111073559347095,0.437350287136941,0.591297171345404,0,0,0.117262387943695,0,0,-0.0442438488275202,0,0,0.0856230231973344,0,0,0,0,0,0,0.164295007333827,0,0,0,0,0,0.165458487625984,0,0.0476371106609188,0,0,0.0905616389277576,-0.0828068658548455,0.0732344309674739,0.0476371106609188,0,0.0476371106609188,0.0476371106609188,0,0,0.0476371106609188,-0.0241060230789031,0.0496432055427799,0.0452808194638788,0,0,0,0,0,0,0,-0.213384524243743,0,0,0.356461659503528,0,0.0476371106609188,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,0.0076194654221693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134722329384051,-0.240879358929064,0,0.0476371106609188,0,0,0,0.0476371106609188,0,-0.0762718696823314,0,0,0,0,2.02095137015875,0,0,0,0.0937650437346026,0,0.069000877539376,0,0,0.258041415419499,0.0238185553304594,0,0,0,0,0,0,0.198561428523759,0.0238185553304594,0,0,0,0,0,0,0.0238185553304594,0,0.0465560116901034,0.129351438212734,0,0.201545751152783,-0.035372635448845,0,0,0.133783773887261,0,0,0,0,0,0,-0.00752186869806765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,-0.011039488474629,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.105355887825347,0,0,0,0,0,0.0476371106609188,-0.0641829433012557,0.0294778480996316,0.208401693365491,0,0,0,0.258829441780507,0.165458487625984,0.0350727361252816,0.0905616389277576,0,0.243570400176401,0,0,0,0,0,0,0.378609519733582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.105685899687509,0,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0.328606126012562,0,0,0,0,0.0238185553304594,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0.0136257473855023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.122524590729286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.206867438426636,0,0,0,0,0,0,0,0,0.0476371106609188,0,0.00993199035740727,0,0,-0.0482220752390542,0,0.0810818553959572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.459942403587955,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.110726369286027,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,0.0421315967020889,0,0.0238185553304594,0,0.0476371106609188,0,0,0,0,0.455588843838276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,-0.105725545243415,-0.216391930154351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.118286134330259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.015583897091203,0,0,0.0238185553304594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458487625984,0.0476371106609188,0,0,0,0,0,-0.0561566557207887,0,0,0,0,0.0476371106609188,0,0,0,0.129622621258172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0.258041415419499,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0.0099204853502298,0,0,0,0,0,0,0,0.00692662426117113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458487625984,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,7.87718128975255e-05,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0.0973041216613662,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0497065165521781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00465716305770761,0.0452808194638788,0,0,0,0,0,0,0,0,0,0.00403072793607154,0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0293153648870894,0,0.0886298659595454,0.997919746121474,0,-0.113842407291654,-0.0268805587166867,0,0,0,0,0,0.0562976485890258,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0.0905616389277576,0,0.063116210837636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238185553304594,0,0,0,0,0,0,0,-0.280072095322966,0,-0.139237773478507,-0.0867269009267123,0,0,-0.170631141730127,0,0,-0.0367311208382308,0,0,-0.174992895090299,-0.50658983936583,0,0,0,0,0.129622621258172,0,0,0,0,0,0,0,0,0,0.0430821044068887,0.0476371106609188,0,0,-0.0568589461625992,-0.178913996666812,0.0905616389277576,-0.0938546567347406,0,0,-0.192075499994218,0,0,0,-0.0959594073735869 | |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number=SC6555 | |rna_catalog_number=SC6555 | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.11217466408709e-242!GO:0005737;cytoplasm;1.65562217830587e-191!GO:0043226;organelle;4.71217519192552e-191!GO:0043229;intracellular organelle;9.02031497244745e-191!GO:0043231;intracellular membrane-bound organelle;1.07676529275933e-189!GO:0043227;membrane-bound organelle;2.43959706056019e-189!GO:0044422;organelle part;1.10124363740392e-138!GO:0044446;intracellular organelle part;3.02581538974919e-137!GO:0044444;cytoplasmic part;7.28061788919913e-130!GO:0032991;macromolecular complex;1.57593307005258e-97!GO:0030529;ribonucleoprotein complex;2.93904716813774e-80!GO:0044238;primary metabolic process;5.51583696228987e-79!GO:0044237;cellular metabolic process;5.51583696228987e-79!GO:0005515;protein binding;6.37883180818932e-79!GO:0005634;nucleus;4.92969796973485e-74!GO:0043170;macromolecule metabolic process;2.00822928767616e-70!GO:0043233;organelle lumen;3.85993744564777e-67!GO:0031974;membrane-enclosed lumen;3.85993744564777e-67!GO:0044428;nuclear part;6.74249696927158e-66!GO:0003723;RNA binding;2.51541959186951e-64!GO:0016043;cellular component organization and biogenesis;4.4617760370526e-59!GO:0005739;mitochondrion;4.81770124664255e-59!GO:0043234;protein complex;2.20411507522096e-50!GO:0031090;organelle membrane;4.09114545691358e-49!GO:0005840;ribosome;3.7316519833625e-47!GO:0033036;macromolecule localization;3.17339293920234e-45!GO:0015031;protein transport;1.21213043157287e-44!GO:0006396;RNA processing;1.06874427766971e-41!GO:0044429;mitochondrial part;2.09456668534789e-41!GO:0008104;protein localization;2.6235310806593e-41!GO:0003735;structural constituent of ribosome;2.83229673718667e-41!GO:0045184;establishment of protein localization;5.17143921299316e-41!GO:0043283;biopolymer metabolic process;7.99605294492998e-41!GO:0006412;translation;2.00116575195787e-40!GO:0019538;protein metabolic process;7.36010450155622e-40!GO:0031981;nuclear lumen;3.0273607710208e-39!GO:0016071;mRNA metabolic process;7.95447915028934e-39!GO:0031967;organelle envelope;1.89093713763274e-37!GO:0031975;envelope;3.40834472063426e-37!GO:0010467;gene expression;6.15424087909082e-37!GO:0033279;ribosomal subunit;6.47925123062996e-37!GO:0008380;RNA splicing;1.99349302336895e-36!GO:0005829;cytosol;5.58339822778053e-36!GO:0046907;intracellular transport;8.64878302627076e-36!GO:0044260;cellular macromolecule metabolic process;2.16439715836477e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.26720582147631e-35!GO:0009058;biosynthetic process;4.92486550524039e-35!GO:0006996;organelle organization and biogenesis;6.87995514092423e-35!GO:0044267;cellular protein metabolic process;9.28569286965865e-35!GO:0065003;macromolecular complex assembly;1.91751758924788e-33!GO:0006397;mRNA processing;2.75854786728012e-33!GO:0044249;cellular biosynthetic process;3.44828276648654e-32!GO:0043228;non-membrane-bound organelle;2.51997119421858e-31!GO:0043232;intracellular non-membrane-bound organelle;2.51997119421858e-31!GO:0009059;macromolecule biosynthetic process;2.53689827339956e-31!GO:0022607;cellular component assembly;3.72589775525014e-30!GO:0006886;intracellular protein transport;8.68858631407056e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.49054291183247e-27!GO:0006259;DNA metabolic process;3.5224156913184e-26!GO:0005740;mitochondrial envelope;5.31162085172769e-26!GO:0005654;nucleoplasm;1.98700618790361e-25!GO:0005681;spliceosome;3.35595947864681e-25!GO:0019866;organelle inner membrane;1.80685490628499e-24!GO:0031966;mitochondrial membrane;2.14248964933386e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.63415443563142e-24!GO:0051641;cellular localization;4.81187975082066e-24!GO:0051649;establishment of cellular localization;5.21229435784232e-24!GO:0005743;mitochondrial inner membrane;2.60299769191674e-22!GO:0006119;oxidative phosphorylation;2.85590354483632e-22!GO:0044445;cytosolic part;7.80692502152037e-22!GO:0006457;protein folding;1.64105786508343e-21!GO:0003676;nucleic acid binding;2.52415805638513e-21!GO:0044451;nucleoplasm part;2.89707971199872e-21!GO:0012505;endomembrane system;3.13632721981965e-21!GO:0048770;pigment granule;6.29583366394318e-20!GO:0042470;melanosome;6.29583366394318e-20!GO:0007049;cell cycle;4.11153466893784e-19!GO:0015935;small ribosomal subunit;6.45146770434902e-19!GO:0044455;mitochondrial membrane part;7.22301956610197e-19!GO:0015934;large ribosomal subunit;7.37488092958658e-19!GO:0031980;mitochondrial lumen;3.13058710768357e-18!GO:0005759;mitochondrial matrix;3.13058710768357e-18!GO:0000166;nucleotide binding;3.80857242850644e-18!GO:0005783;endoplasmic reticulum;4.54959843895392e-18!GO:0016462;pyrophosphatase activity;5.58403161651172e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.77503920418406e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;8.02556229676347e-18!GO:0022618;protein-RNA complex assembly;1.64595237010481e-17!GO:0017111;nucleoside-triphosphatase activity;4.03593550331097e-17!GO:0005794;Golgi apparatus;5.19879575531796e-17!GO:0016070;RNA metabolic process;2.33326048082007e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.43217262708108e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.4084411569716e-16!GO:0005746;mitochondrial respiratory chain;7.11072341229646e-16!GO:0044265;cellular macromolecule catabolic process;7.11072341229646e-16!GO:0051276;chromosome organization and biogenesis;7.11072341229646e-16!GO:0016874;ligase activity;4.43517045088833e-15!GO:0006512;ubiquitin cycle;7.2227314660605e-15!GO:0051082;unfolded protein binding;1.02353778204506e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.02353778204506e-14!GO:0003954;NADH dehydrogenase activity;1.02353778204506e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.02353778204506e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.18328802060929e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.32580961678307e-14!GO:0044432;endoplasmic reticulum part;1.34952895489493e-14!GO:0000278;mitotic cell cycle;2.10364834526092e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.16630121994844e-14!GO:0005694;chromosome;2.45555087669365e-14!GO:0019941;modification-dependent protein catabolic process;2.64057072992e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.64057072992e-14!GO:0016192;vesicle-mediated transport;3.38985319991863e-14!GO:0044257;cellular protein catabolic process;4.32484569226765e-14!GO:0006323;DNA packaging;6.0571379133272e-14!GO:0044248;cellular catabolic process;7.42049640738426e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.63439786480281e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.549250221935e-14!GO:0008135;translation factor activity, nucleic acid binding;9.76788165511982e-14!GO:0005761;mitochondrial ribosome;1.01141754942972e-13!GO:0000313;organellar ribosome;1.01141754942972e-13!GO:0022402;cell cycle process;1.47655946953985e-13!GO:0009057;macromolecule catabolic process;1.69096971876696e-13!GO:0044427;chromosomal part;1.77995868861515e-13!GO:0043285;biopolymer catabolic process;2.05495084338624e-13!GO:0008134;transcription factor binding;3.0813755683737e-13!GO:0048193;Golgi vesicle transport;4.41308949371667e-13!GO:0051186;cofactor metabolic process;6.5407462901414e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.89162960872664e-13!GO:0042773;ATP synthesis coupled electron transport;6.89162960872664e-13!GO:0005730;nucleolus;7.72612963437663e-13!GO:0030964;NADH dehydrogenase complex (quinone);8.73619472661661e-13!GO:0045271;respiratory chain complex I;8.73619472661661e-13!GO:0005747;mitochondrial respiratory chain complex I;8.73619472661661e-13!GO:0006605;protein targeting;1.21461054516767e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.21461054516767e-12!GO:0005635;nuclear envelope;1.37784027599944e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.55524224166061e-12!GO:0000375;RNA splicing, via transesterification reactions;1.55524224166061e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.55524224166061e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.31408974819199e-12!GO:0030163;protein catabolic process;2.91355510259846e-12!GO:0032553;ribonucleotide binding;5.34783404782816e-12!GO:0032555;purine ribonucleotide binding;5.34783404782816e-12!GO:0006974;response to DNA damage stimulus;6.36777192762667e-12!GO:0031965;nuclear membrane;1.06948207258152e-11!GO:0065004;protein-DNA complex assembly;2.19698215465116e-11!GO:0006413;translational initiation;2.90319428607046e-11!GO:0017076;purine nucleotide binding;3.60828482180776e-11!GO:0006333;chromatin assembly or disassembly;4.67883836067325e-11!GO:0003743;translation initiation factor activity;5.24211647967071e-11!GO:0000087;M phase of mitotic cell cycle;5.30518749209615e-11!GO:0043412;biopolymer modification;7.48616101273266e-11!GO:0007067;mitosis;8.51691679457692e-11!GO:0044453;nuclear membrane part;8.8645178723282e-11!GO:0051301;cell division;8.9304720819844e-11!GO:0000785;chromatin;1.08265187565343e-10!GO:0006163;purine nucleotide metabolic process;1.19395923570265e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.21783496408762e-10!GO:0006732;coenzyme metabolic process;1.45184620642707e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.61176970832417e-10!GO:0016604;nuclear body;1.61915087927031e-10!GO:0009259;ribonucleotide metabolic process;2.36711638794963e-10!GO:0008565;protein transporter activity;3.29551187165719e-10!GO:0006164;purine nucleotide biosynthetic process;3.29551187165719e-10!GO:0005789;endoplasmic reticulum membrane;3.91251210807405e-10!GO:0006446;regulation of translational initiation;3.93101883945908e-10!GO:0009150;purine ribonucleotide metabolic process;4.23493227119058e-10!GO:0006281;DNA repair;5.96170045375937e-10!GO:0006464;protein modification process;6.02418253484289e-10!GO:0005793;ER-Golgi intermediate compartment;8.45820832741711e-10!GO:0022403;cell cycle phase;9.43248603090224e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.11770283766934e-09!GO:0009055;electron carrier activity;1.21517749476237e-09!GO:0015630;microtubule cytoskeleton;1.21677574040598e-09!GO:0006334;nucleosome assembly;1.41094216035438e-09!GO:0003924;GTPase activity;1.46416243130413e-09!GO:0048475;coated membrane;1.60883760439283e-09!GO:0030117;membrane coat;1.60883760439283e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42392344283115e-09!GO:0009260;ribonucleotide biosynthetic process;2.53323354085505e-09!GO:0031497;chromatin assembly;5.3157972602902e-09!GO:0048523;negative regulation of cellular process;6.8069682029516e-09!GO:0016607;nuclear speck;7.429365304456e-09!GO:0006461;protein complex assembly;7.63587858021505e-09!GO:0009060;aerobic respiration;8.15377934925133e-09!GO:0009719;response to endogenous stimulus;8.15377934925133e-09!GO:0006913;nucleocytoplasmic transport;9.01899386753146e-09!GO:0031988;membrane-bound vesicle;9.58815130640551e-09!GO:0045333;cellular respiration;1.00448885865457e-08!GO:0016023;cytoplasmic membrane-bound vesicle;1.01970478690962e-08!GO:0050794;regulation of cellular process;1.07351636818675e-08!GO:0015986;ATP synthesis coupled proton transport;1.17300511432237e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.17300511432237e-08!GO:0009141;nucleoside triphosphate metabolic process;1.74165322536564e-08!GO:0005768;endosome;1.95488015757887e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.11739604022531e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.29222039973106e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.29222039973106e-08!GO:0051169;nuclear transport;2.3479689806878e-08!GO:0043687;post-translational protein modification;2.72940488140062e-08!GO:0005643;nuclear pore;2.76728874546302e-08!GO:0005524;ATP binding;2.87992450010126e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.01445289222845e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.01445289222845e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.18241637891281e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.18241637891281e-08!GO:0003712;transcription cofactor activity;3.38958489090661e-08!GO:0012501;programmed cell death;3.74164613407204e-08!GO:0030120;vesicle coat;3.90848683653763e-08!GO:0030662;coated vesicle membrane;3.90848683653763e-08!GO:0006403;RNA localization;4.32623540609776e-08!GO:0042254;ribosome biogenesis and assembly;4.68690261510698e-08!GO:0009056;catabolic process;4.77550604911232e-08!GO:0050657;nucleic acid transport;4.7898188832145e-08!GO:0051236;establishment of RNA localization;4.7898188832145e-08!GO:0050658;RNA transport;4.7898188832145e-08!GO:0032559;adenyl ribonucleotide binding;5.18158007933018e-08!GO:0006915;apoptosis;5.21423433118644e-08!GO:0031982;vesicle;5.43524866250037e-08!GO:0042623;ATPase activity, coupled;5.61603483730905e-08!GO:0044431;Golgi apparatus part;5.69359108460943e-08!GO:0031410;cytoplasmic vesicle;6.13117892468206e-08!GO:0006260;DNA replication;6.82639687807968e-08!GO:0008639;small protein conjugating enzyme activity;6.87840529138843e-08!GO:0006366;transcription from RNA polymerase II promoter;7.34632140423143e-08!GO:0019829;cation-transporting ATPase activity;7.67991005544192e-08!GO:0000279;M phase;8.2897890360951e-08!GO:0004842;ubiquitin-protein ligase activity;8.83592910848752e-08!GO:0019787;small conjugating protein ligase activity;9.88829667656167e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.000883573001e-07!GO:0051726;regulation of cell cycle;1.04956210306917e-07!GO:0000074;regulation of progression through cell cycle;1.18432502642454e-07!GO:0016887;ATPase activity;1.27595740953444e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.51698768457409e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.5540318221981e-07!GO:0046034;ATP metabolic process;2.72089596539415e-07!GO:0030554;adenyl nucleotide binding;3.00235438528298e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.00235438528298e-07!GO:0006099;tricarboxylic acid cycle;3.14302597133712e-07!GO:0046356;acetyl-CoA catabolic process;3.14302597133712e-07!GO:0006754;ATP biosynthetic process;3.1721101340521e-07!GO:0006753;nucleoside phosphate metabolic process;3.1721101340521e-07!GO:0048519;negative regulation of biological process;3.23559153031781e-07!GO:0065002;intracellular protein transport across a membrane;3.9743214037976e-07!GO:0043566;structure-specific DNA binding;4.07562424734839e-07!GO:0008219;cell death;4.3384993844027e-07!GO:0016265;death;4.3384993844027e-07!GO:0017038;protein import;4.34711077098717e-07!GO:0004386;helicase activity;4.71848538740301e-07!GO:0050789;regulation of biological process;4.90335790469689e-07!GO:0005525;GTP binding;5.87059756879146e-07!GO:0005667;transcription factor complex;5.97356550003942e-07!GO:0016568;chromatin modification;7.38204664922106e-07!GO:0009117;nucleotide metabolic process;8.65715111223761e-07!GO:0016881;acid-amino acid ligase activity;9.43840334070716e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.05356514537762e-06!GO:0006084;acetyl-CoA metabolic process;1.10759460336051e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.17863601761486e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.23433579332166e-06!GO:0051028;mRNA transport;1.89055802887718e-06!GO:0003697;single-stranded DNA binding;2.25305603470324e-06!GO:0031252;leading edge;2.31703556489347e-06!GO:0016853;isomerase activity;2.40213543367481e-06!GO:0005788;endoplasmic reticulum lumen;2.41460545806354e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.86409813509141e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.86409813509141e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.86409813509141e-06!GO:0051188;cofactor biosynthetic process;3.03737799914669e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.12458085668928e-06!GO:0000245;spliceosome assembly;3.35131492644963e-06!GO:0046930;pore complex;3.59499326368629e-06!GO:0007005;mitochondrion organization and biogenesis;3.69516550617611e-06!GO:0044440;endosomal part;3.69722521588247e-06!GO:0010008;endosome membrane;3.69722521588247e-06!GO:0008026;ATP-dependent helicase activity;3.86952297626146e-06!GO:0043038;amino acid activation;4.02533561629905e-06!GO:0006418;tRNA aminoacylation for protein translation;4.02533561629905e-06!GO:0043039;tRNA aminoacylation;4.02533561629905e-06!GO:0009109;coenzyme catabolic process;4.18596673186719e-06!GO:0006399;tRNA metabolic process;4.7160565925416e-06!GO:0005798;Golgi-associated vesicle;4.83926343469805e-06!GO:0045259;proton-transporting ATP synthase complex;5.01435590875746e-06!GO:0016126;sterol biosynthetic process;5.56674737075009e-06!GO:0006916;anti-apoptosis;5.64459499934414e-06!GO:0015078;hydrogen ion transmembrane transporter activity;5.9514326640405e-06!GO:0043069;negative regulation of programmed cell death;6.01030036464032e-06!GO:0032561;guanyl ribonucleotide binding;6.6994250070564e-06!GO:0019001;guanyl nucleotide binding;6.6994250070564e-06!GO:0048471;perinuclear region of cytoplasm;7.02784237365645e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.47604004871015e-06!GO:0000139;Golgi membrane;7.59912503131381e-06!GO:0051187;cofactor catabolic process;7.96456232090936e-06!GO:0043066;negative regulation of apoptosis;8.0102071916826e-06!GO:0007010;cytoskeleton organization and biogenesis;8.02304662890874e-06!GO:0006613;cotranslational protein targeting to membrane;9.39377231474798e-06!GO:0051246;regulation of protein metabolic process;9.40131471223295e-06!GO:0005905;coated pit;1.05889071079038e-05!GO:0016859;cis-trans isomerase activity;1.07079956186194e-05!GO:0004298;threonine endopeptidase activity;1.08794355842606e-05!GO:0032446;protein modification by small protein conjugation;1.12095313578165e-05!GO:0030118;clathrin coat;1.2081558530648e-05!GO:0031324;negative regulation of cellular metabolic process;1.22396800649704e-05!GO:0006752;group transfer coenzyme metabolic process;1.25600713079466e-05!GO:0008654;phospholipid biosynthetic process;1.45443203516088e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.61101275282057e-05!GO:0005773;vacuole;1.71093443585588e-05!GO:0016567;protein ubiquitination;2.42657942772356e-05!GO:0043623;cellular protein complex assembly;2.70420861901945e-05!GO:0005770;late endosome;2.97441381452771e-05!GO:0006364;rRNA processing;3.37381710770088e-05!GO:0009892;negative regulation of metabolic process;3.69915016422606e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.17416752344685e-05!GO:0005762;mitochondrial large ribosomal subunit;4.22673592780586e-05!GO:0000315;organellar large ribosomal subunit;4.22673592780586e-05!GO:0016481;negative regulation of transcription;4.30248042915586e-05!GO:0003724;RNA helicase activity;4.56082795703546e-05!GO:0000786;nucleosome;4.56719031290469e-05!GO:0016564;transcription repressor activity;4.6246041508203e-05!GO:0042981;regulation of apoptosis;4.71119959693132e-05!GO:0006793;phosphorus metabolic process;4.79004420965706e-05!GO:0006796;phosphate metabolic process;4.79004420965706e-05!GO:0006695;cholesterol biosynthetic process;5.0895500727398e-05!GO:0043067;regulation of programmed cell death;5.18801998805768e-05!GO:0016072;rRNA metabolic process;5.22456901762232e-05!GO:0015980;energy derivation by oxidation of organic compounds;5.79627151847536e-05!GO:0005874;microtubule;5.96280017254805e-05!GO:0051427;hormone receptor binding;6.01385199467532e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.57503887799859e-05!GO:0009108;coenzyme biosynthetic process;6.66292203321577e-05!GO:0030867;rough endoplasmic reticulum membrane;7.15523403286845e-05!GO:0008092;cytoskeletal protein binding;7.73737783399111e-05!GO:0005769;early endosome;8.34673544262098e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.73145867001371e-05!GO:0042802;identical protein binding;9.48683483636008e-05!GO:0005819;spindle;9.84928050570201e-05!GO:0051170;nuclear import;0.000103277887497147!GO:0005791;rough endoplasmic reticulum;0.000108369706289893!GO:0000151;ubiquitin ligase complex;0.000109622268984416!GO:0035257;nuclear hormone receptor binding;0.000124713422793355!GO:0030133;transport vesicle;0.000126136002217554!GO:0016740;transferase activity;0.000126374921085074!GO:0006606;protein import into nucleus;0.00013275531291659!GO:0016363;nuclear matrix;0.000133820916965716!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000133820916965716!GO:0005813;centrosome;0.000144020411869894!GO:0007264;small GTPase mediated signal transduction;0.000144560314201562!GO:0000323;lytic vacuole;0.000154104003636637!GO:0005764;lysosome;0.000154104003636637!GO:0043021;ribonucleoprotein binding;0.000155767491767372!GO:0008361;regulation of cell size;0.00016136449806808!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000161984053632009!GO:0045786;negative regulation of progression through cell cycle;0.000172860615041185!GO:0003714;transcription corepressor activity;0.000197065310242981!GO:0016491;oxidoreductase activity;0.000211658621092212!GO:0019222;regulation of metabolic process;0.000222209753651081!GO:0030119;AP-type membrane coat adaptor complex;0.000225172936755412!GO:0016049;cell growth;0.000233269490856815!GO:0000314;organellar small ribosomal subunit;0.000239181565058226!GO:0005763;mitochondrial small ribosomal subunit;0.000239181565058226!GO:0016310;phosphorylation;0.000257556953302118!GO:0003713;transcription coactivator activity;0.000270474389598528!GO:0016044;membrane organization and biogenesis;0.000283303999382041!GO:0030036;actin cytoskeleton organization and biogenesis;0.000287269488240473!GO:0045454;cell redox homeostasis;0.000292660107061523!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000295644744046647!GO:0005815;microtubule organizing center;0.00030168944287913!GO:0007051;spindle organization and biogenesis;0.000309442687480429!GO:0033116;ER-Golgi intermediate compartment membrane;0.000328547955386937!GO:0030131;clathrin adaptor complex;0.000356162087243498!GO:0008250;oligosaccharyl transferase complex;0.00037359897385271!GO:0051329;interphase of mitotic cell cycle;0.000410261949674164!GO:0015631;tubulin binding;0.000435453644230386!GO:0000902;cell morphogenesis;0.000445752970166136!GO:0032989;cellular structure morphogenesis;0.000445752970166136!GO:0031968;organelle outer membrane;0.000475510164103404!GO:0030658;transport vesicle membrane;0.000479258400519415!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000491720841720617!GO:0048468;cell development;0.000520158509513855!GO:0001558;regulation of cell growth;0.000524707160400781!GO:0051168;nuclear export;0.000527984900477208!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000538308530670355!GO:0005048;signal sequence binding;0.000566701684617201!GO:0005885;Arp2/3 protein complex;0.000584987648776993!GO:0003729;mRNA binding;0.000605084120979697!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00060527921788187!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000623845917523934!GO:0051920;peroxiredoxin activity;0.000664199372713231!GO:0006612;protein targeting to membrane;0.000723342423795709!GO:0019867;outer membrane;0.000727726221847169!GO:0009165;nucleotide biosynthetic process;0.000770143890746177!GO:0016563;transcription activator activity;0.000809936888099865!GO:0004576;oligosaccharyl transferase activity;0.000814497874067697!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00084030218578911!GO:0019899;enzyme binding;0.000849117614003058!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000915832303069476!GO:0008186;RNA-dependent ATPase activity;0.000962401873404383!GO:0046474;glycerophospholipid biosynthetic process;0.00100463824852037!GO:0003690;double-stranded DNA binding;0.00105091324550016!GO:0016787;hydrolase activity;0.00110308884735703!GO:0030660;Golgi-associated vesicle membrane;0.00114501862296375!GO:0018196;peptidyl-asparagine modification;0.00117411070125599!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00117411070125599!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.001280486429695!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00128229199888717!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00128229199888717!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00128229199888717!GO:0051325;interphase;0.00131029628125182!GO:0001726;ruffle;0.00138723191245298!GO:0044262;cellular carbohydrate metabolic process;0.00142156579372403!GO:0065007;biological regulation;0.00144580236263284!GO:0008610;lipid biosynthetic process;0.00145062445961393!GO:0005741;mitochondrial outer membrane;0.00147901364474222!GO:0016779;nucleotidyltransferase activity;0.00148196706720502!GO:0051789;response to protein stimulus;0.00149419969913234!GO:0006986;response to unfolded protein;0.00149419969913234!GO:0006402;mRNA catabolic process;0.00152767194090551!GO:0046467;membrane lipid biosynthetic process;0.00152767194090551!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00155908421455325!GO:0030029;actin filament-based process;0.00187521901946096!GO:0007017;microtubule-based process;0.00197046093135804!GO:0006261;DNA-dependent DNA replication;0.00208030693167977!GO:0031072;heat shock protein binding;0.00214191094480643!GO:0043681;protein import into mitochondrion;0.00219136181544546!GO:0006650;glycerophospholipid metabolic process;0.00221189596976985!GO:0006414;translational elongation;0.00221318503313314!GO:0006383;transcription from RNA polymerase III promoter;0.00230334955312425!GO:0051087;chaperone binding;0.00235734832130524!GO:0006007;glucose catabolic process;0.00256653943131893!GO:0004004;ATP-dependent RNA helicase activity;0.00260840619850497!GO:0048500;signal recognition particle;0.00275109602542734!GO:0006891;intra-Golgi vesicle-mediated transport;0.00285248105497731!GO:0030027;lamellipodium;0.00290390155747623!GO:0003899;DNA-directed RNA polymerase activity;0.00293204227481583!GO:0030125;clathrin vesicle coat;0.00294854181196239!GO:0030665;clathrin coated vesicle membrane;0.00294854181196239!GO:0031124;mRNA 3'-end processing;0.00297650064196008!GO:0048487;beta-tubulin binding;0.00301183363629519!GO:0005637;nuclear inner membrane;0.00309174838744525!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00313877318796294!GO:0045892;negative regulation of transcription, DNA-dependent;0.00319650945984445!GO:0019843;rRNA binding;0.00359528967960797!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0036085699109019!GO:0030663;COPI coated vesicle membrane;0.00365894616020999!GO:0030126;COPI vesicle coat;0.00365894616020999!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00368655036270851!GO:0030659;cytoplasmic vesicle membrane;0.00375388458922413!GO:0045045;secretory pathway;0.00375388458922413!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00385195267773441!GO:0003682;chromatin binding;0.0038937422322819!GO:0043488;regulation of mRNA stability;0.00397031891087618!GO:0043487;regulation of RNA stability;0.00397031891087618!GO:0000075;cell cycle checkpoint;0.0040278325394542!GO:0044433;cytoplasmic vesicle part;0.00416289483308101!GO:0000775;chromosome, pericentric region;0.00416662752410951!GO:0051287;NAD binding;0.00418412759373151!GO:0051252;regulation of RNA metabolic process;0.00428313431045604!GO:0000059;protein import into nucleus, docking;0.00434709704008977!GO:0006643;membrane lipid metabolic process;0.0045309322300974!GO:0030521;androgen receptor signaling pathway;0.00456846877125751!GO:0046489;phosphoinositide biosynthetic process;0.00472489524744201!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00473750891268605!GO:0005869;dynactin complex;0.00481390029727393!GO:0008180;signalosome;0.00500871272482117!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00527515965309814!GO:0015399;primary active transmembrane transporter activity;0.00527515965309814!GO:0006338;chromatin remodeling;0.00549304530910411!GO:0008139;nuclear localization sequence binding;0.00551014636501843!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00559971088561809!GO:0045047;protein targeting to ER;0.00559971088561809!GO:0007052;mitotic spindle organization and biogenesis;0.00559971088561809!GO:0000118;histone deacetylase complex;0.0056072918505359!GO:0012506;vesicle membrane;0.00566837192808145!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00585318278184175!GO:0006626;protein targeting to mitochondrion;0.00585318278184175!GO:0006352;transcription initiation;0.00595194947324069!GO:0000776;kinetochore;0.00646654703949089!GO:0008312;7S RNA binding;0.00666066724853977!GO:0008286;insulin receptor signaling pathway;0.00675571333674728!GO:0030132;clathrin coat of coated pit;0.00689814622387526!GO:0030134;ER to Golgi transport vesicle;0.00733476798111024!GO:0005657;replication fork;0.00738113319770139!GO:0006509;membrane protein ectodomain proteolysis;0.00738113319770139!GO:0033619;membrane protein proteolysis;0.00738113319770139!GO:0006740;NADPH regeneration;0.00751224757961678!GO:0006098;pentose-phosphate shunt;0.00751224757961678!GO:0006839;mitochondrial transport;0.00751224757961678!GO:0030137;COPI-coated vesicle;0.00758524146617798!GO:0007006;mitochondrial membrane organization and biogenesis;0.0076582447376618!GO:0005684;U2-dependent spliceosome;0.0083159825803084!GO:0003684;damaged DNA binding;0.0083555402232465!GO:0031123;RNA 3'-end processing;0.0084548199358811!GO:0035258;steroid hormone receptor binding;0.00854622055740678!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0085700756429616!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0085700756429616!GO:0031901;early endosome membrane;0.00884870086295795!GO:0022890;inorganic cation transmembrane transporter activity;0.00884870086295795!GO:0006401;RNA catabolic process;0.00889609064328113!GO:0015992;proton transport;0.00889980932433888!GO:0017166;vinculin binding;0.00895680544730122!GO:0045893;positive regulation of transcription, DNA-dependent;0.00922884603464008!GO:0031323;regulation of cellular metabolic process;0.00935551459970526!GO:0040008;regulation of growth;0.00987460886924078!GO:0006818;hydrogen transport;0.010080579068762!GO:0030127;COPII vesicle coat;0.010080579068762!GO:0012507;ER to Golgi transport vesicle membrane;0.010080579068762!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0102531877774633!GO:0043284;biopolymer biosynthetic process;0.0107656035698861!GO:0003711;transcription elongation regulator activity;0.0109723941245185!GO:0051128;regulation of cellular component organization and biogenesis;0.01102051270597!GO:0007040;lysosome organization and biogenesis;0.011372845553924!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0119830392925811!GO:0007021;tubulin folding;0.0122224346579145!GO:0003746;translation elongation factor activity;0.0124059031597728!GO:0006378;mRNA polyadenylation;0.0128624537656165!GO:0007033;vacuole organization and biogenesis;0.0130856870407216!GO:0016197;endosome transport;0.0131819432358817!GO:0006350;transcription;0.0132833774019876!GO:0030384;phosphoinositide metabolic process;0.0132953266416712!GO:0008022;protein C-terminus binding;0.0133772018069621!GO:0016584;nucleosome positioning;0.0137223783513267!GO:0050750;low-density lipoprotein receptor binding;0.013881930646787!GO:0005832;chaperonin-containing T-complex;0.0139272350852723!GO:0006405;RNA export from nucleus;0.0139681284935014!GO:0016125;sterol metabolic process;0.0140607700471661!GO:0007093;mitotic cell cycle checkpoint;0.0145141513306181!GO:0030176;integral to endoplasmic reticulum membrane;0.0150581109498684!GO:0006897;endocytosis;0.0153253840695899!GO:0010324;membrane invagination;0.0153253840695899!GO:0043624;cellular protein complex disassembly;0.0160041337103328!GO:0031543;peptidyl-proline dioxygenase activity;0.0160059609567072!GO:0008094;DNA-dependent ATPase activity;0.0160707278672482!GO:0007050;cell cycle arrest;0.0161172754500001!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0163779078989685!GO:0005875;microtubule associated complex;0.0168012639672699!GO:0043130;ubiquitin binding;0.0168961126712167!GO:0032182;small conjugating protein binding;0.0168961126712167!GO:0006672;ceramide metabolic process;0.0169558875239301!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0169881699759552!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0170858174897559!GO:0055083;monovalent inorganic anion homeostasis;0.0170858174897559!GO:0055064;chloride ion homeostasis;0.0170858174897559!GO:0030644;cellular chloride ion homeostasis;0.0170858174897559!GO:0042393;histone binding;0.0171601020817624!GO:0032984;macromolecular complex disassembly;0.0172887359314639!GO:0050681;androgen receptor binding;0.0173530153684326!GO:0016251;general RNA polymerase II transcription factor activity;0.0176439878695195!GO:0065009;regulation of a molecular function;0.0180449086602087!GO:0046519;sphingoid metabolic process;0.0180611606436872!GO:0051052;regulation of DNA metabolic process;0.0181542081164648!GO:0003702;RNA polymerase II transcription factor activity;0.0182052604229508!GO:0031902;late endosome membrane;0.0188268829123076!GO:0000339;RNA cap binding;0.0194254087319007!GO:0005862;muscle thin filament tropomyosin;0.0194254087319007!GO:0016272;prefoldin complex;0.0196939313676128!GO:0006595;polyamine metabolic process;0.0199258542874732!GO:0005212;structural constituent of eye lens;0.0199342857736513!GO:0007088;regulation of mitosis;0.0199468417968926!GO:0006644;phospholipid metabolic process;0.0201672526958229!GO:0008097;5S rRNA binding;0.0202885579238127!GO:0007243;protein kinase cascade;0.0204396822988019!GO:0040029;regulation of gene expression, epigenetic;0.0212386991543227!GO:0006091;generation of precursor metabolites and energy;0.0212386991543227!GO:0000209;protein polyubiquitination;0.021337745087875!GO:0030032;lamellipodium biogenesis;0.0213824456348168!GO:0016408;C-acyltransferase activity;0.0214895063806886!GO:0030880;RNA polymerase complex;0.0217967516575262!GO:0043022;ribosome binding;0.0218347031599606!GO:0032906;transforming growth factor-beta2 production;0.0222377031900927!GO:0032909;regulation of transforming growth factor-beta2 production;0.0222377031900927!GO:0019798;procollagen-proline dioxygenase activity;0.0224998915503282!GO:0005938;cell cortex;0.0227704123113079!GO:0006720;isoprenoid metabolic process;0.0230436711802112!GO:0016860;intramolecular oxidoreductase activity;0.0230436711802112!GO:0050811;GABA receptor binding;0.0239113902427453!GO:0006302;double-strand break repair;0.0242646618025284!GO:0042158;lipoprotein biosynthetic process;0.0243298891328405!GO:0005876;spindle microtubule;0.0255105438162637!GO:0006289;nucleotide-excision repair;0.0261231542170281!GO:0051101;regulation of DNA binding;0.0265260372047341!GO:0045941;positive regulation of transcription;0.0266076303066251!GO:0008047;enzyme activator activity;0.0269236958652688!GO:0008017;microtubule binding;0.0272667963634736!GO:0031625;ubiquitin protein ligase binding;0.0275975305735594!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0277450775029115!GO:0032508;DNA duplex unwinding;0.0277450775029115!GO:0032392;DNA geometric change;0.0277450775029115!GO:0006376;mRNA splice site selection;0.0277953490896237!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0277953490896237!GO:0043492;ATPase activity, coupled to movement of substances;0.0282472326491122!GO:0006220;pyrimidine nucleotide metabolic process;0.0283970449095798!GO:0048522;positive regulation of cellular process;0.028592997008849!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.028720418011772!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0293637437496273!GO:0000082;G1/S transition of mitotic cell cycle;0.029878497772613!GO:0001666;response to hypoxia;0.0302789346628408!GO:0010468;regulation of gene expression;0.0308733570288973!GO:0006497;protein amino acid lipidation;0.0310256915608558!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0310679960279508!GO:0046365;monosaccharide catabolic process;0.0313689761339432!GO:0006144;purine base metabolic process;0.031699218184443!GO:0016407;acetyltransferase activity;0.0322746029322238!GO:0043241;protein complex disassembly;0.0322746029322238!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0327966766247287!GO:0006611;protein export from nucleus;0.0330496203330985!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0332795088861155!GO:0006739;NADP metabolic process;0.0334923424354799!GO:0031371;ubiquitin conjugating enzyme complex;0.0335773810084434!GO:0031970;organelle envelope lumen;0.0337685554845405!GO:0030140;trans-Golgi network transport vesicle;0.0337887339645159!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0342307793324261!GO:0006096;glycolysis;0.0345129052695363!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0347760142922526!GO:0005784;translocon complex;0.0347760142922526!GO:0051098;regulation of binding;0.0347760142922526!GO:0006730;one-carbon compound metabolic process;0.0363787557033715!GO:0009081;branched chain family amino acid metabolic process;0.0364472913235334!GO:0006268;DNA unwinding during replication;0.0364698838925943!GO:0006066;alcohol metabolic process;0.0367650799683018!GO:0000049;tRNA binding;0.0368055418582248!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0369145889071253!GO:0017134;fibroblast growth factor binding;0.0374598563570081!GO:0003678;DNA helicase activity;0.0374598563570081!GO:0000792;heterochromatin;0.0374797692494645!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0378372652484589!GO:0046164;alcohol catabolic process;0.0382776473869368!GO:0008154;actin polymerization and/or depolymerization;0.0383908062904219!GO:0005774;vacuolar membrane;0.0392144301773278!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0402725562645114!GO:0000428;DNA-directed RNA polymerase complex;0.0402725562645114!GO:0051539;4 iron, 4 sulfur cluster binding;0.042128830297921!GO:0007059;chromosome segregation;0.0422718818585433!GO:0016585;chromatin remodeling complex;0.0435232058909385!GO:0033673;negative regulation of kinase activity;0.0437256306315271!GO:0006469;negative regulation of protein kinase activity;0.0437256306315271!GO:0030496;midbody;0.0446263801106128!GO:0005996;monosaccharide metabolic process;0.044860820595266!GO:0043631;RNA polyadenylation;0.044860820595266!GO:0008538;proteasome activator activity;0.0449219877131005!GO:0004674;protein serine/threonine kinase activity;0.0449219877131005!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.044924391872537!GO:0015002;heme-copper terminal oxidase activity;0.044924391872537!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.044924391872537!GO:0004129;cytochrome-c oxidase activity;0.044924391872537!GO:0004563;beta-N-acetylhexosaminidase activity;0.0453184555109324!GO:0000096;sulfur amino acid metabolic process;0.0453863009174165!GO:0019904;protein domain specific binding;0.0462269910290682!GO:0019320;hexose catabolic process;0.0462269910290682!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0466647208057512!GO:0000910;cytokinesis;0.047151214570637!GO:0019318;hexose metabolic process;0.0471744514300648!GO:0030911;TPR domain binding;0.0471978010099626!GO:0005844;polysome;0.0477079038708595!GO:0044452;nucleolar part;0.0477569965690791!GO:0022406;membrane docking;0.0477859055829671!GO:0048278;vesicle docking;0.0477859055829671!GO:0006518;peptide metabolic process;0.04792680427717!GO:0032981;mitochondrial respiratory chain complex I assembly;0.04792680427717!GO:0010257;NADH dehydrogenase complex assembly;0.04792680427717!GO:0033108;mitochondrial respiratory chain complex assembly;0.04792680427717!GO:0030518;steroid hormone receptor signaling pathway;0.0490927284827433!GO:0004448;isocitrate dehydrogenase activity;0.0491531258178613!GO:0008287;protein serine/threonine phosphatase complex;0.0491531258178613!GO:0031418;L-ascorbic acid binding;0.0491576622739901!GO:0003923;GPI-anchor transamidase activity;0.0493422025188597!GO:0016255;attachment of GPI anchor to protein;0.0493422025188597!GO:0042765;GPI-anchor transamidase complex;0.0493422025188597!GO:0046983;protein dimerization activity;0.0494223822519662!GO:0050662;coenzyme binding;0.049659066749109!GO:0043433;negative regulation of transcription factor activity;0.0497257017970737 | |||
|sample_id=11609 | |sample_id=11609 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=NANOG:2.85379555922;PAX1,9:2.69123322933;SOX2:2.42607685551;T:2.21164932884;RBPJ:1.98299030759;NKX2-1,4:1.86608885439;GFI1:1.76234102644;ZIC1..3:1.75114056344;OCT4_SOX2{dimer}:1.63681701236;LHX3,4:1.5390403069;SOX{8,9,10}:1.48925696968;SOX17:1.45319473946;SP1:1.42537245533;VSX1,2:1.37526683105;NFY{A,B,C}:1.32036375753;GTF2A1,2:1.28414176308;PBX1:1.26928381328;FOXM1:1.24820076219;PATZ1:1.24041229649;ALX1:1.22951991181;TFDP1:1.22337065542;PAX5:1.22044082635;MZF1:1.19984268064;POU5F1:1.19766270917;MAZ:1.09659522;EBF1:1.08160720978;ZFP161:1.0739074322;PRRX1,2:1.0623779868;NKX2-3_NKX2-5:1.05683105506;HOX{A6,A7,B6,B7}:1.04640027335;MTE{core}:1.03040005565;LEF1_TCF7_TCF7L1,2:1.02841346592;ONECUT1,2:1.0261508476;HOX{A4,D4}:0.994024298258;GFI1B:0.979369352607;RREB1:0.97103180807;RORA:0.958334006181;ADNP_IRX_SIX_ZHX:0.929783943466;NHLH1,2:0.914019350568;STAT1,3:0.909053422209;CDX1,2,4:0.896447973127;NKX6-1,2:0.890677141452;GTF2I:0.880013770336;RFX1:0.853306208;CUX2:0.785246550716;LMO2:0.745366901872;TLX1..3_NFIC{dimer}:0.73780963632;DBP:0.698854574735;CRX:0.692874417409;XCPE1{core}:0.690552124828;RFX2..5_RFXANK_RFXAP:0.606704315497;ZBTB6:0.603073147472;POU1F1:0.594108780458;EVI1:0.58623985621;EGR1..3:0.584880484443;HIC1:0.577309865676;NRF1:0.556785093254;ZNF384:0.553085044443;CDC5L:0.550053154031;ZNF143:0.472502825056;JUN:0.47224625028;TFAP2B:0.453634069304;EP300:0.431632516153;TFAP4:0.413514763997;AHR_ARNT_ARNT2:0.413482980231;MED-1{core}:0.385077789771;MYFfamily:0.382849228825;PAX6:0.38075512186;E2F1..5:0.373049101504;PRDM1:0.367953144976;REST:0.333191363542;HAND1,2:0.292806348401;MYOD1:0.270790988869;GATA4:0.264744645327;SREBF1,2:0.250710355423;TGIF1:0.240871052092;NR3C1:0.234682531581;HNF4A_NR2F1,2:0.206299141057;KLF4:0.201459402801;SMAD1..7,9:0.169278822457;TEAD1:0.168130524084;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.164790030922;PAX8:0.152606746662;NFE2:0.135315180787;NKX3-1:0.121510390276;PAX4:0.108433879197;TBP:0.104550260824;HOX{A5,B5}:0.103289393816;BPTF:0.0944549284775;TFCP2:0.0919179626891;YY1:0.0672646057492;ESRRA:0.0634652297419;FOXP1:0.0567675590263;ZEB1:0.0509786746587;FOXP3:0.040913209617;TAL1_TCF{3,4,12}:0.0277766467251;FOSL2:0.0197647015863;POU3F1..4:0.0031443104297;SOX5:-0.0207010013873;TFAP2{A,C}:-0.0254888846564;RXR{A,B,G}:-0.0294278841389;NFATC1..3:-0.0308515536536;HNF1A:-0.0408607381042;MYBL2:-0.0624116675226;BREu{core}:-0.0695820969786;ELK1,4_GABP{A,B1}:-0.07898932633;NR1H4:-0.0917697439702;HSF1,2:-0.0990700812571;GCM1,2:-0.105768047877;IKZF1:-0.114541942508;HMX1:-0.11498679717;SRF:-0.132490750007;ATF2:-0.134520261736;RUNX1..3:-0.166750020354;TP53:-0.167223105345;MYB:-0.168071710301;MEF2{A,B,C,D}:-0.181177182426;HIF1A:-0.198802928052;FOXQ1:-0.212024996961;FOX{I1,J2}:-0.212309327209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.216127014572;POU2F1..3:-0.222966982376;FOS_FOS{B,L1}_JUN{B,D}:-0.22354404941;BACH2:-0.230905559238;POU6F1:-0.238753864561;SNAI1..3:-0.24614171694;NFIL3:-0.250360427406;ZNF148:-0.250938639974;IKZF2:-0.251735582486;NKX3-2:-0.258432454985;FOXL1:-0.262274733208;ZNF423:-0.262329877031;EN1,2:-0.262861054983;MTF1:-0.302431658961;ZBTB16:-0.319807012335;NR6A1:-0.322071996613;NFKB1_REL_RELA:-0.333113671878;GZF1:-0.336572948695;PDX1:-0.339269870059;UFEwm:-0.342430332332;NR5A1,2:-0.35136356496;NFE2L2:-0.355683476763;STAT5{A,B}:-0.370734622365;NFIX:-0.38087832894;STAT2,4,6:-0.390788722458;FOXN1:-0.397804877038;DMAP1_NCOR{1,2}_SMARC:-0.429914459402;TBX4,5:-0.457050472849;FOXA2:-0.459968967516;PITX1..3:-0.470542258948;IRF1,2:-0.475110331371;GATA6:-0.475773124121;CREB1:-0.506621923487;ATF4:-0.519407427714;IRF7:-0.528538703594;FOXD3:-0.533346525993;GLI1..3:-0.534776490717;TEF:-0.558447421201;XBP1:-0.559236923142;TOPORS:-0.56421218307;ALX4:-0.568243427151;MAFB:-0.576249731904;PAX2:-0.577431119093;CEBPA,B_DDIT3:-0.592951009306;FOX{D1,D2}:-0.606184688103;ARID5B:-0.611354322632;FOXO1,3,4:-0.627206466934;NKX2-2,8:-0.646413024531;SPIB:-0.655653863385;HMGA1,2:-0.666918096143;SPI1:-0.702139523604;AIRE:-0.730718873265;ZNF238:-0.758785528039;HLF:-0.763213233193;ELF1,2,4:-0.767558991038;ESR1:-0.781434172162;FOX{F1,F2,J1}:-0.786605517644;SPZ1:-0.795264397187;HOXA9_MEIS1:-0.798335533871;bHLH_family:-0.853969157008;RXRA_VDR{dimer}:-0.875146778547;ETS1,2:-0.903832894701;NANOG{mouse}:-0.906175283087;PPARG:-0.908548841655;ATF5_CREB3:-0.910294846571;HBP1_HMGB_SSRP1_UBTF:-0.920045315724;ATF6:-0.977585309886;NFE2L1:-1.01067764438;PAX3,7:-1.13824122954;TLX2:-1.1416498694;AR:-1.42860854997;HES1:-1.75643856365 | |top_motifs=NANOG:2.85379555922;PAX1,9:2.69123322933;SOX2:2.42607685551;T:2.21164932884;RBPJ:1.98299030759;NKX2-1,4:1.86608885439;GFI1:1.76234102644;ZIC1..3:1.75114056344;OCT4_SOX2{dimer}:1.63681701236;LHX3,4:1.5390403069;SOX{8,9,10}:1.48925696968;SOX17:1.45319473946;SP1:1.42537245533;VSX1,2:1.37526683105;NFY{A,B,C}:1.32036375753;GTF2A1,2:1.28414176308;PBX1:1.26928381328;FOXM1:1.24820076219;PATZ1:1.24041229649;ALX1:1.22951991181;TFDP1:1.22337065542;PAX5:1.22044082635;MZF1:1.19984268064;POU5F1:1.19766270917;MAZ:1.09659522;EBF1:1.08160720978;ZFP161:1.0739074322;PRRX1,2:1.0623779868;NKX2-3_NKX2-5:1.05683105506;HOX{A6,A7,B6,B7}:1.04640027335;MTE{core}:1.03040005565;LEF1_TCF7_TCF7L1,2:1.02841346592;ONECUT1,2:1.0261508476;HOX{A4,D4}:0.994024298258;GFI1B:0.979369352607;RREB1:0.97103180807;RORA:0.958334006181;ADNP_IRX_SIX_ZHX:0.929783943466;NHLH1,2:0.914019350568;STAT1,3:0.909053422209;CDX1,2,4:0.896447973127;NKX6-1,2:0.890677141452;GTF2I:0.880013770336;RFX1:0.853306208;CUX2:0.785246550716;LMO2:0.745366901872;TLX1..3_NFIC{dimer}:0.73780963632;DBP:0.698854574735;CRX:0.692874417409;XCPE1{core}:0.690552124828;RFX2..5_RFXANK_RFXAP:0.606704315497;ZBTB6:0.603073147472;POU1F1:0.594108780458;EVI1:0.58623985621;EGR1..3:0.584880484443;HIC1:0.577309865676;NRF1:0.556785093254;ZNF384:0.553085044443;CDC5L:0.550053154031;ZNF143:0.472502825056;JUN:0.47224625028;TFAP2B:0.453634069304;EP300:0.431632516153;TFAP4:0.413514763997;AHR_ARNT_ARNT2:0.413482980231;MED-1{core}:0.385077789771;MYFfamily:0.382849228825;PAX6:0.38075512186;E2F1..5:0.373049101504;PRDM1:0.367953144976;REST:0.333191363542;HAND1,2:0.292806348401;MYOD1:0.270790988869;GATA4:0.264744645327;SREBF1,2:0.250710355423;TGIF1:0.240871052092;NR3C1:0.234682531581;HNF4A_NR2F1,2:0.206299141057;KLF4:0.201459402801;SMAD1..7,9:0.169278822457;TEAD1:0.168130524084;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.164790030922;PAX8:0.152606746662;NFE2:0.135315180787;NKX3-1:0.121510390276;PAX4:0.108433879197;TBP:0.104550260824;HOX{A5,B5}:0.103289393816;BPTF:0.0944549284775;TFCP2:0.0919179626891;YY1:0.0672646057492;ESRRA:0.0634652297419;FOXP1:0.0567675590263;ZEB1:0.0509786746587;FOXP3:0.040913209617;TAL1_TCF{3,4,12}:0.0277766467251;FOSL2:0.0197647015863;POU3F1..4:0.0031443104297;SOX5:-0.0207010013873;TFAP2{A,C}:-0.0254888846564;RXR{A,B,G}:-0.0294278841389;NFATC1..3:-0.0308515536536;HNF1A:-0.0408607381042;MYBL2:-0.0624116675226;BREu{core}:-0.0695820969786;ELK1,4_GABP{A,B1}:-0.07898932633;NR1H4:-0.0917697439702;HSF1,2:-0.0990700812571;GCM1,2:-0.105768047877;IKZF1:-0.114541942508;HMX1:-0.11498679717;SRF:-0.132490750007;ATF2:-0.134520261736;RUNX1..3:-0.166750020354;TP53:-0.167223105345;MYB:-0.168071710301;MEF2{A,B,C,D}:-0.181177182426;HIF1A:-0.198802928052;FOXQ1:-0.212024996961;FOX{I1,J2}:-0.212309327209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.216127014572;POU2F1..3:-0.222966982376;FOS_FOS{B,L1}_JUN{B,D}:-0.22354404941;BACH2:-0.230905559238;POU6F1:-0.238753864561;SNAI1..3:-0.24614171694;NFIL3:-0.250360427406;ZNF148:-0.250938639974;IKZF2:-0.251735582486;NKX3-2:-0.258432454985;FOXL1:-0.262274733208;ZNF423:-0.262329877031;EN1,2:-0.262861054983;MTF1:-0.302431658961;ZBTB16:-0.319807012335;NR6A1:-0.322071996613;NFKB1_REL_RELA:-0.333113671878;GZF1:-0.336572948695;PDX1:-0.339269870059;UFEwm:-0.342430332332;NR5A1,2:-0.35136356496;NFE2L2:-0.355683476763;STAT5{A,B}:-0.370734622365;NFIX:-0.38087832894;STAT2,4,6:-0.390788722458;FOXN1:-0.397804877038;DMAP1_NCOR{1,2}_SMARC:-0.429914459402;TBX4,5:-0.457050472849;FOXA2:-0.459968967516;PITX1..3:-0.470542258948;IRF1,2:-0.475110331371;GATA6:-0.475773124121;CREB1:-0.506621923487;ATF4:-0.519407427714;IRF7:-0.528538703594;FOXD3:-0.533346525993;GLI1..3:-0.534776490717;TEF:-0.558447421201;XBP1:-0.559236923142;TOPORS:-0.56421218307;ALX4:-0.568243427151;MAFB:-0.576249731904;PAX2:-0.577431119093;CEBPA,B_DDIT3:-0.592951009306;FOX{D1,D2}:-0.606184688103;ARID5B:-0.611354322632;FOXO1,3,4:-0.627206466934;NKX2-2,8:-0.646413024531;SPIB:-0.655653863385;HMGA1,2:-0.666918096143;SPI1:-0.702139523604;AIRE:-0.730718873265;ZNF238:-0.758785528039;HLF:-0.763213233193;ELF1,2,4:-0.767558991038;ESR1:-0.781434172162;FOX{F1,F2,J1}:-0.786605517644;SPZ1:-0.795264397187;HOXA9_MEIS1:-0.798335533871;bHLH_family:-0.853969157008;RXRA_VDR{dimer}:-0.875146778547;ETS1,2:-0.903832894701;NANOG{mouse}:-0.906175283087;PPARG:-0.908548841655;ATF5_CREB3:-0.910294846571;HBP1_HMGB_SSRP1_UBTF:-0.920045315724;ATF6:-0.977585309886;NFE2L1:-1.01067764438;PAX3,7:-1.13824122954;TLX2:-1.1416498694;AR:-1.42860854997;HES1:-1.75643856365 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11609-120I7;search_select_hide=table117:FF:11609-120I7 | |||
}} | }} | ||
Latest revision as of 18:11, 4 June 2020
| Name: | Lens Epithelial Cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12568 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12568
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12568
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0252 |
| 10 | 10 | 0.0111 |
| 100 | 100 | 0.893 |
| 101 | 101 | 0.524 |
| 102 | 102 | 0.964 |
| 103 | 103 | 0.152 |
| 104 | 104 | 0.662 |
| 105 | 105 | 0.47 |
| 106 | 106 | 0.0365 |
| 107 | 107 | 0.978 |
| 108 | 108 | 0.337 |
| 109 | 109 | 0.0307 |
| 11 | 11 | 0.0296 |
| 110 | 110 | 0.249 |
| 111 | 111 | 0.0207 |
| 112 | 112 | 0.0523 |
| 113 | 113 | 0.715 |
| 114 | 114 | 0.0102 |
| 115 | 115 | 0.0845 |
| 116 | 116 | 0.577 |
| 117 | 117 | 0.0152 |
| 118 | 118 | 0.178 |
| 119 | 119 | 0.242 |
| 12 | 12 | 0.67 |
| 120 | 120 | 0.292 |
| 121 | 121 | 0.711 |
| 122 | 122 | 0.739 |
| 123 | 123 | 0.0359 |
| 124 | 124 | 0.694 |
| 125 | 125 | 0.964 |
| 126 | 126 | 0.324 |
| 127 | 127 | 0.616 |
| 128 | 128 | 0.293 |
| 129 | 129 | 0.261 |
| 13 | 13 | 0.161 |
| 130 | 130 | 0.0681 |
| 131 | 131 | 0.478 |
| 132 | 132 | 0.938 |
| 133 | 133 | 0.863 |
| 134 | 134 | 0.808 |
| 135 | 135 | 0.401 |
| 136 | 136 | 0.571 |
| 137 | 137 | 0.0843 |
| 138 | 138 | 0.235 |
| 139 | 139 | 0.0025 |
| 14 | 14 | 0.84 |
| 140 | 140 | 0.442 |
| 141 | 141 | 0.216 |
| 142 | 142 | 0.0988 |
| 143 | 143 | 0.0321 |
| 144 | 144 | 0.731 |
| 145 | 145 | 0.788 |
| 146 | 146 | 0.876 |
| 147 | 147 | 0.864 |
| 148 | 148 | 0.00687 |
| 149 | 149 | 0.111 |
| 15 | 15 | 0.0719 |
| 150 | 150 | 0.392 |
| 151 | 151 | 0.311 |
| 152 | 152 | 0.12 |
| 153 | 153 | 0.419 |
| 154 | 154 | 0.604 |
| 155 | 155 | 0.0253 |
| 156 | 156 | 0.25 |
| 157 | 157 | 0.622 |
| 158 | 158 | 0.334 |
| 159 | 159 | 0.446 |
| 16 | 16 | 0.0999 |
| 160 | 160 | 0.203 |
| 161 | 161 | 0.452 |
| 162 | 162 | 0.232 |
| 163 | 163 | 0.867 |
| 164 | 164 | 0.00292 |
| 165 | 165 | 0.586 |
| 166 | 166 | 0.294 |
| 167 | 167 | 0.217 |
| 168 | 168 | 0.496 |
| 169 | 169 | 0.00389 |
| 17 | 17 | 0.0746 |
| 18 | 18 | 0.0764 |
| 19 | 19 | 0.307 |
| 2 | 2 | 0.696 |
| 20 | 20 | 0.664 |
| 21 | 21 | 0.293 |
| 22 | 22 | 0.362 |
| 23 | 23 | 0.21 |
| 24 | 24 | 0.59 |
| 25 | 25 | 0.348 |
| 26 | 26 | 0.0802 |
| 27 | 27 | 0.537 |
| 28 | 28 | 0.825 |
| 29 | 29 | 0.0283 |
| 3 | 3 | 0.0343 |
| 30 | 30 | 0.397 |
| 31 | 31 | 0.892 |
| 32 | 32 | 0.077 |
| 33 | 33 | 0.275 |
| 34 | 34 | 0.836 |
| 35 | 35 | 0.279 |
| 36 | 36 | 0.106 |
| 37 | 37 | 0.0729 |
| 38 | 38 | 0.163 |
| 39 | 39 | 0.744 |
| 4 | 4 | 0.755 |
| 40 | 40 | 0.49 |
| 41 | 41 | 0.293 |
| 42 | 42 | 0.232 |
| 43 | 43 | 0.135 |
| 44 | 44 | 0.151 |
| 45 | 45 | 0.936 |
| 46 | 46 | 0.0641 |
| 47 | 47 | 0.051 |
| 48 | 48 | 0.104 |
| 49 | 49 | 0.106 |
| 5 | 5 | 0.193 |
| 50 | 50 | 0.889 |
| 51 | 51 | 0.471 |
| 52 | 52 | 0.751 |
| 53 | 53 | 0.606 |
| 54 | 54 | 0.393 |
| 55 | 55 | 0.0741 |
| 56 | 56 | 0.616 |
| 57 | 57 | 0.366 |
| 58 | 58 | 0.0992 |
| 59 | 59 | 0.0978 |
| 6 | 6 | 0.51 |
| 60 | 60 | 0.0724 |
| 61 | 61 | 0.119 |
| 62 | 62 | 0.0445 |
| 63 | 63 | 0.162 |
| 64 | 64 | 0.287 |
| 65 | 65 | 0.107 |
| 66 | 66 | 0.714 |
| 67 | 67 | 0.682 |
| 68 | 68 | 0.463 |
| 69 | 69 | 0.37 |
| 7 | 7 | 0.243 |
| 70 | 70 | 0.00826 |
| 71 | 71 | 0.0142 |
| 72 | 72 | 0.398 |
| 73 | 73 | 0.0402 |
| 74 | 74 | 0.204 |
| 75 | 75 | 0.00993 |
| 76 | 76 | 0.142 |
| 77 | 77 | 0.234 |
| 78 | 78 | 0.149 |
| 79 | 79 | 0.159 |
| 8 | 8 | 0.147 |
| 80 | 80 | 0.7 |
| 81 | 81 | 0.221 |
| 82 | 82 | 0.0512 |
| 83 | 83 | 0.636 |
| 84 | 84 | 0.627 |
| 85 | 85 | 0.0929 |
| 86 | 86 | 0.0712 |
| 87 | 87 | 0.128 |
| 88 | 88 | 0.765 |
| 89 | 89 | 0.347 |
| 9 | 9 | 0.455 |
| 90 | 90 | 0.486 |
| 91 | 91 | 0.602 |
| 92 | 92 | 0.12 |
| 93 | 93 | 0.0541 |
| 94 | 94 | 0.0624 |
| 95 | 95 | 0.0259 |
| 96 | 96 | 0.541 |
| 97 | 97 | 0.717 |
| 98 | 98 | 0.229 |
| 99 | 99 | 0.871 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12568
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000085 (human lens epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
