FF:11865-125B2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004927 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008159;DRR009031;DRZ000456;DRZ001841;DRZ011806;DRZ013191 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000335,FF:0011108 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.48!3045.16!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.89!777.94!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.76!579.37!TFEC;;chr16:85932760..85932775,+!p1@IRF8!2.42!262.74!IRF8;;chr12:54778471..54778528,-!p1@ZNF385A!2.31!200.99!ZNF385A;;chr20:39317868..39317884,-!p1@MAFB!2.20!1744.16!MAFB;;chr11:47400062..47400077,-!p2@SPI1!2.18!149.53!SPI1;;chr14:35872453..35872485,-!p2@NFKBIA!2.15!332.97!NFKBIA;;chr3:101546827..101546847,+!p2@NFKBIZ!2.13!184.65!NFKBIZ;;chr11:47399947..47399961,-!p3@SPI1!2.11!128.95!SPI1;;chr2:192015701..192015743,-!p1@STAT4!2.10!167.70!STAT4;;chr6:126240380..126240430,+!p2@NCOA7!2.01!254.87!NCOA7;;chr10:51572408..51572454,+!p3@NCOA4!1.99!537.59!NCOA4;;chr2:70142232..70142251,+!p1@MXD1!1.99!517.01!MXD1;;chr12:72056800..72056834,+!p1@THAP2!1.99!128.34!THAP2;;chr12:72056749..72056767,+!p6@THAP2!1.98!103.52!THAP2;;chr14:35873947..35873965,-!p1@NFKBIA!1.96!5355.97!NFKBIA;;chr21:34442439..34442455,+!p1@OLIG1!1.94!86.57!OLIG1;;chr10:104155659..104155676,+!p4@NFKB2!1.90!96.86!NFKB2;;chr19:50432132..50432217,+!p2@ATF5!1.86!84.76!ATF5;;chr11:615942..615957,-!p1@IRF7!1.84!612.06!IRF7;;chr10:104155480..104155534,+!p2@NFKB2!1.83!408.04!NFKB2;;chr11:65430554..65430579,-!p3@RELA!1.83!162.85!RELA;;chr11:47400032..47400043,-!p5@SPI1!1.82!65.38!SPI1;;chr12:72056773..72056796,+!p3@THAP2!1.80!79.91!THAP2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.79!2945.27!NFKBIZ;;chr4:103422499..103422632,+!p1@NFKB1!1.79!1180.53!NFKB1;;chr2:145275162..145275202,-!p2@ZEB2!1.79!337.21!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.79!60.54!SPI1;;chr1:38325227..38325246,-!p2@MTF1!1.78!79.31!MTF1;;chr21:30673091..30673135,+!p7@BACH1!1.78!59.93!BACH1;;chr7:50344289..50344323,+!p1@IKZF1!1.78!59.93!IKZF1;;chr1:37940170..37940190,+!p1@ZC3H12A!1.76!650.80!ZC3H12A;;chr2:145277640..145277771,-!p1@ZEB2!1.73!670.78!ZEB2;;chr2:61108695..61108753,+!p1@REL!1.73!346.89!REL;;chr10:31288398..31288455,-!p2@ZNF438!1.71!58.72!ZNF438;;chr2:68592394..68592405,+!p2@PLEK!1.70!49.04!PLEK;;chr10:35484053..35484076,+!p1@CREM!1.69!115.63!CREM;;chr9:102584262..102584276,+!p1@NR4A3!1.69!102.92!NR4A3;;chr6:126240442..126240459,+!p4@NCOA7!1.68!58.72!NCOA7;;chr21:30671690..30671762,+!p2@BACH1!1.67!149.53!BACH1;;chr8:123793988..123794016,+!p1@ZHX2!1.67!78.70!ZHX2;;chr6:144385698..144385742,-!p2@PLAGL1!1.64!50.85!PLAGL1;;chr10:104154246..104154347,+!p3@NFKB2!1.63!242.16!NFKB2;;chr6:106534192..106534224,+!p1@PRDM1!1.63!114.42!PRDM1;;chr10:51572339..51572376,+!p4@NCOA4!1.63!92.02!NCOA4;;chr4:81104895..81104920,+!p2@PRDM8!1.62!59.93!PRDM8;;chr11:65430535..65430549,-!p4@RELA!1.62!47.22!RELA;;chr18:77155922..77155939,+!p1@NFATC1!1.61!105.34!NFATC1;;chr9:102584128..102584144,+!p3@NR4A3!1.58!68.41!NR4A3;;chr11:615570..615721,-!p2@IRF7!1.56!68.41!IRF7;;chr6:126240463..126240489,+!p6@NCOA7!1.56!39.35!NCOA7;;chr2:231090471..231090504,+!p2@SP140!1.56!35.72!SP140;;chrX:153305787..153305807,-!p3@MECP2!1.56!35.72!MECP2;;chr16:31885093..31885165,+!p1@ZNF267!1.54!492.80!ZNF267;;chr1:157108130..157108173,-!p1@ETV3!1.54!234.90!ETV3;;chr6:12012170..12012245,+!p1@HIVEP1!1.54!161.04!HIVEP1;;chr1:221052776..221052799,+!p1@HLX!1.54!59.33!HLX;;chr2:231084639..231084654,-!p2@SP110!1.54!54.49!SP110;;chr14:35872926..35872951,-!p4@NFKBIA!1.54!46.62!NFKBIA;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.54!33.90!ZBED1;;chr5:131826457..131826514,-!p1@IRF1!1.53!1223.51!IRF1;;chr21:30671235..30671253,+!p1@BACH1!1.52!391.69!BACH1;;chr14:35872494..35872511,-!p5@NFKBIA!1.52!42.38!NFKBIA;;chr10:64018918..64018936,+!p2@ZNF365!1.51!31.48!ZNF365;;chr2:68615063..68615089,+!p4@PLEK!1.51!31.48!PLEK;;chr6:44233252..44233296,-!p1@NFKBIE!1.50!289.99!NFKBIE;;chr9:102584159..102584174,+!p2@NR4A3!1.49!53.28!NR4A3;;chr2:145277882..145277967,-!p3@ZEB2!1.49!50.25!ZEB2;;chr2:231090433..231090469,+!p1@SP140!1.49!29.66!SP140;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.66!SPI1;;chr11:65430586..65430593,-!p5@RELA!1.48!32.69!RELA;;chr2:122042770..122042785,-!p1@TFCP2L1!1.48!29.06!TFCP2L1;;chr22:38597987..38598021,+!p2@MAFF!1.47!166.48!MAFF;;chr19:45252008..45252024,+!p2@BCL3!1.46!88.99!BCL3;;chr14:35872962..35873025,-!p3@NFKBIA!1.46!69.02!NFKBIA;;chr11:64764435..64764449,-!p1@BATF2!1.46!38.14!BATF2;;chr11:47399920..47399931,-!p7@SPI1!1.45!27.24!SPI1;;chr6:15246200..15246214,+!p2@JARID2!1.44!72.04!JARID2;;chr5:142782823..142782854,-!p3@NR3C1!1.44!37.53!NR3C1;;chr17:40440225..40440268,+!p3@STAT5A!1.44!33.90!STAT5A;;chr10:31288370..31288393,-!p3@ZNF438!1.44!26.64!ZNF438;;chr11:34642612..34642646,+!p1@EHF!1.44!26.64!EHF;;chr1:212782094..212782109,+!p1@ATF3!1.43!671.39!ATF3;;chr14:35872542..35872553,-!p10@NFKBIA!1.43!26.03!NFKBIA;;chr4:81104985..81105005,+!p4@PRDM8!1.42!30.88!PRDM8;;chr19:45971246..45971265,+!p1@FOSB!1.41!442.55!FOSB;;chr19:36391434..36391450,-!p1@NFKBID!1.41!47.83!NFKBID;;chr21:30672433..30672464,+!p6@BACH1!1.41!24.82!BACH1;;chr7:115670792..115670797,-!p2@TFEC!1.40!24.22!TFEC;;chrX:129244454..129244488,-!p1@ELF4!1.38!161.04!ELF4;;chr13:41593425..41593480,-!p1@ELF1!1.38!141.66!ELF1;;chr3:39195037..39195069,-!p2@CSRNP1!1.38!137.43!CSRNP1;;chr12:54778351..54778378,-!p6@ZNF385A!1.38!23.01!ZNF385A;;chr9:129567282..129567353,+!p1@ZBTB43!1.37!286.35!ZBTB43;;chr4:81105027..81105039,+!p3@PRDM8!1.37!26.03!PRDM8;;chr14:35872414..35872425,-!p7@NFKBIA!1.37!24.82!NFKBIA;;chr12:72056706..72056717,+!p10@THAP2!1.37!22.40!THAP2;;chr4:81104865..81104886,+!p6@PRDM8!1.36!23.61!PRDM8;;chr19:50432104..50432126,+!p6@ATF5!1.36!21.79!ATF5;;chr2:97202480..97202499,+!p1@ARID5A!1.35!210.07!ARID5A;;chr10:104155680..104155687,+!p6@NFKB2!1.35!21.19!NFKB2;;chr17:40440359..40440386,+!p4@STAT5A!1.35!21.19!STAT5A;;chr7:17338266..17338282,+!p1@AHR!1.34!219.15!AHR;;chr4:103423079..103423112,+!p4@NFKB1!1.33!20.58!NFKB1;;chr21:36260295..36260310,-!p3@RUNX1!1.32!32.09!RUNX1;;chr3:39195139..39195150,-!p3@CSRNP1!1.32!25.43!CSRNP1;;chr6:126240356..126240379,+!p7@NCOA7!1.32!24.22!NCOA7;;chr20:56195474..56195506,-!p1@ZBP1!1.32!19.98!ZBP1;;chr19:46801639..46801699,+!p1@HIF3A!1.31!19.37!HIF3A;;chr6:12011943..12012015,+!p2@HIVEP1!1.30!60.54!HIVEP1;;chr6:391743..391759,+!p1@IRF4!1.30!18.77!IRF4;;chr8:72755203..72755239,-!p10@MSC!1.30!18.77!MSC;;chr3:37217736..37217753,-!p2@LRRFIP2!1.29!76.28!LRRFIP2;;chr6:106534230..106534254,+!p2@PRDM1!1.29!45.40!PRDM1;;chr2:191878812..191878823,-!p2@STAT1!1.29!23.61!STAT1;;chr4:185395633..185395651,-!p2@IRF2!1.28!29.06!IRF2;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.40!ZBTB10;;chr2:145275228..145275241,-!p11@ZEB2!1.28!21.79!ZEB2;;chr10:104155455..104155479,+!p1@NFKB2!1.27!248.21!NFKB2;;chr4:106068026..106068084,+!p1@TET2!1.27!153.77!TET2;;chr7:17338324..17338341,+!p3@AHR!1.25!55.70!AHR;;chr1:158979872..158979898,+!p3@IFI16!1.25!51.46!IFI16;;chr1:221052733..221052749,+!p2@HLX!1.25!21.79!HLX;;chr21:40177845..40177863,+!p1@ETS2!1.24!952.29!ETS2;;chr12:11802753..11802834,+!p2@ETV6!1.24!78.70!ETV6;;chr2:68615031..68615055,+!p3@PLEK!1.24!16.35!PLEK;;chr10:3827371..3827386,-!p2@KLF6!1.23!132.58!KLF6;;chr7:106809470..106809481,+!p2@HBP1!1.23!22.40!HBP1;;chr10:64576105..64576133,-!p1@EGR2!1.22!31.48!EGR2;;chr2:70167296..70167306,+!p3@MXD1!1.22!23.61!MXD1;;chr4:81104958..81104981,+!p5@PRDM8!1.22!18.16!PRDM8;;chr2:191885737..191885750,-!p4@STAT1!1.22!15.74!STAT1;;chr9:102584278..102584285,+!p5@NR4A3!1.22!15.74!NR4A3;;chr1:221054853..221054873,+!p9@HLX!1.21!15.13!HLX;;chr1:37947257..37947292,+!p4@ZC3H12A!1.21!15.13!ZC3H12A;;chr1:120190786..120190915,-!p1@ZNF697!1.20!107.16!ZNF697;;chr3:12329397..12329433,+!p2@PPARG!1.20!33.30!PPARG;;chr8:72756063..72756125,-!p1@MSC!1.20!30.27!MSC;;chr8:72756267..72756296,-!p4@MSC!1.20!21.79!MSC;;chr1:25256756..25256774,-!p1@RUNX3!1.19!27.24!RUNX3;;chrX:153305741..153305753,-!p4@MECP2!1.19!14.53!MECP2;;chr7:128577972..128578047,+!p1@IRF5!1.18!22.40!IRF5;;chr2:61108771..61108789,+!p4@REL!1.18!21.19!REL;;chr2:28618532..28618610,+!p4@FOSL2!1.17!23.61!FOSL2;;chr6:34524093..34524135,-!p1@SPDEF!1.17!13.92!SPDEF;;chr8:22550982..22550999,-!p1@EGR3!1.16!38.14!EGR3;;chr12:54785074..54785122,-!p2@ZNF385A!1.16!20.58!ZNF385A;;chrX:24167086..24167111,+!p4@ZFX!1.16!13.32!ZFX;;chrX:153305962..153305995,-!p5@MECP2!1.16!13.32!MECP2;;chr21:34442540..34442560,+!p2@OLIG1!1.16!13.32!OLIG1;;chr6:143266297..143266356,-!p1@HIVEP2!1.15!62.36!HIVEP2;;chr6:12012249..12012266,+!p5@HIVEP1!1.15!23.01!HIVEP1;;chr4:185395590..185395627,-!p3@IRF2!1.15!16.35!IRF2;;chr20:47894569..47894799,-!p1@ZNFX1!1.14!333.58!ZNFX1;;chr6:15246261..15246312,+!p1@JARID2!1.14!305.73!JARID2;;chr21:40177892..40177903,+!p2@ETS2!1.14!50.85!ETS2;;chr10:51575814..51575835,+!p8@NCOA4!1.14!12.71!NCOA4;;chr13:41593392..41593403,-!p7@ELF1!1.14!12.71!ELF1;;chr17:40440177..40440190,+!p6@STAT5A!1.14!12.71!STAT5A;;chr20:48807351..48807384,+!p1@CEBPB!1.13!1276.18!CEBPB;;chr2:231084659..231084721,-!p1@SP110!1.13!290.59!SP110;;chr2:185463247..185463263,+!p1@ZNF804A!1.13!22.40!ZNF804A;;chr9:102584241..102584261,+!p4@NR4A3!1.13!19.37!NR4A3;;chr2:231280954..231280965,+!p2@SP100!1.12!22.40!SP100;;chr8:72756637..72756664,-!p3@MSC!1.12!13.92!MSC;;chr6:36355431..36355466,-!p1@ETV7!1.12!12.11!ETV7;;chr14:75988831..75988847,+!p2@BATF!1.12!12.11!BATF;;chr19:45504688..45504782,+!p1@RELB!1.11!72.04!RELB;;chr18:3449586..3449617,+!p8@TGIF1!1.10!18.77!TGIF1;;chr17:38497662..38497713,+!p4@RARA!1.10!13.32!RARA;;chr8:72755345..72755349,-!p14@MSC!1.10!11.50!MSC;;chr2:192015677..192015691,-!p3@STAT4!1.10!11.50!STAT4;;chr9:110252035..110252057,-!p1@KLF4!1.09!182.83!KLF4;;chr11:113930425..113930471,+!p1@ZBTB16!1.09!16.35!ZBTB16;;chr12:54785054..54785072,-!p4@ZNF385A!1.09!12.71!ZNF385A;;chr7:139762641..139762768,-!p1@PARP12!1.08!149.53!PARP12;;chr3:39195075..39195088,-!p1@CSRNP1!1.08!69.62!CSRNP1;;chr2:208394817..208394834,+!p3@CREB1!1.08!44.80!CREB1;;chr3:187455680..187455700,-!p4@BCL6!1.08!10.90!BCL6;;chr4:103423120..103423142,+!p8@NFKB1!1.08!10.90!NFKB1;;chr19:45251395..45251432,+!p8@BCL3!1.08!10.90!BCL3;;chr10:35484090..35484104,+!p6@CREM!1.08!10.90!CREM;;chr3:170075436..170075520,+!p1@SKIL!1.07!233.08!SKIL;;chr13:41635029..4163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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 34: | Line 42: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000335,FF:0000625,FF:0011108,FF:11865-125B2 | |fonse_treatment_closure=EFO:0000369,FF:0000335,FF:0000625,FF:0011108,FF:11865-125B2 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor1.CNhs13470.11865-125B2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor1.CNhs13470.11865-125B2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor1.CNhs13470.11865-125B2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor1.CNhs13470.11865-125B2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor1.CNhs13470.11865-125B2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11865-125B2 | |id=FF:11865-125B2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011108 | ||
|is_obsolete= | |||
|library_id=CNhs13470 | |||
|library_id_phase_based=2:CNhs13470 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11865 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11865 | |||
|name=CD14+ monocytes - treated with lipopolysaccharide, donor1 | |name=CD14+ monocytes - treated with lipopolysaccharide, donor1 | ||
|namespace= | |namespace= | ||
Line 41: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13470,LSID1024,release012,COMPLETED | |profile_hcage=CNhs13470,LSID1024,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.534228984731047,0.514415551356735,0,0,0.449663264052159,0,0.184231230415688,0,0.690099424398907,0.468362607322358,0,0,0,0,0,0,0,0,0,0,0.60498136141318,0.344549260502074,0,-0.153323010348428,0,0,0,0.405282242752886,0,0.246591364234016,0,0.35957431132124,0.211592670723211,0,0,0,0,0,0,0,0.205583124092593,0,0.205583124092593,0,0,0.439091982419609,0.296912149841155,0,0,0,0.397106262277117,0,0,0,0.0785765409334625,0,0,0,0,0.205583124092593,-0.030957013416006,0.205583124092593,0.437236623488442,0,0.60498136141318,-0.097343627213097,0,0.462365873367537,0,0,0,0,0,0,0,0,0.205583124092593,0,0,0,0,0,0,0.14131269840735,0,0,0,0,0,0,-0.269938898689297,0.102791562046296,0,0.0228027533881283,-0.0686081712681019,-0.0389227724448319,0.267114492365523,0,1.50215270937841,0,0.351627912814452,0.438280909037975,0,0,0,0,0,0.933222230055191,0,0,0,0,0,0,0.327623194072376,0,0,0,0,0.128458038103618,0.205583124092593,0,0,0.424975169083454,0.587320849285053,0,0.344549260502074,0.205583124092593,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.351627912814452,0,0,0,1.13714481315728,0,0.205583124092593,0,0,0,0,0,-0.041595751192971,0,0.554744883961458,-0.143515142523472,0.172274630251037,0,0.130455431700552,0,0,0,0,0,0.205583124092593,0.344549260502074,0.344549260502074,0.205583124092593,-0.128119866952565,0,0.155170572503279,0.102791562046296,0,0,0,0.153649349167186,-0.305472230898407,0.344549260502074,0.18531625017173,0.536637100335811,0,0,0,0,0.0048255229630092,0,-0.120879483793741,0.45150881640763,-0.0160284640102133,-0.323325841563045,-0.04680465889238,0,0.205583124092593,0,-0.0569395202842211,-0.20891377592429,0,0,0.385744279028722,0.380057960941852,0,0,0.746100231605649,0,0.381068414037108,0.0364033235406969,0,-0.056763028968439,0.205583124092593,0,0,0,0.102791562046296,0,0,0,0,0,0,0.1147811634296,0.277992764734211,0.231542450188524,0,0,0,-0.0928688718712634,0,-0.0233543786676857,0.510908284286818,-0.350736013296859,0,-0.0757600315297599,0,1.00666065544209,0.110663852621974,0.308034966152498,-0.0686081712681019,-0.147401849371139,0.0156014045427462,0,-0.379040327812225,-0.181291267700832,-0.0341444389101724,0.363525556972853,-0.0662159506682092,-0.314176473374675,-0.260071944536947,0,0,0,-0.76514378723743,0,0.0228027533881283,-0.040451450424615,0.0193796684138571,-0.287662208583306,0.267797403750958,-0.55122821730723,-0.177316920925579,0.609516678127929,-0.251853328804001,-0.0608577781842185,-0.0939491308313235,0,0,0,0.0261404684558581,0.523138275344684,0.775295686341882,0,0.364457687306059,0.137238863015225,0,-0.031237934588408,-0.129743110502008,0,0,-0.0445482461403646,0,0,0,0,0,-0.529349154576058,0.408440952554982,0.301373423175503,0,-0.116523785041037,0.0041908563024741,-0.072454448326507,0,0.184886429315341,0.344549260502074,0.120922981943347,0.0869534622827235,0,-0.191880218418104,-0.35211260844604,-0.057355405085112,-0.0778455448896637,0.391216437240333,0.538026134995145,0.101084485718272,-0.0731400124509818,0.568887959146073,-0.114709392743274,0.117456291617306,0.125541313589544,0.0336872843940491,1.17314251092131,0.00702169556883445,-0.308463711932238,0.155948400228536,-0.150117833086411,0,0.497826533284078,0,0.0966402694591756,-0.195884490971166,0.843151123074149,0.35902269949823,0,-0.310360693361009,-0.122325164605886,0,-0.0668012490793869,0.01169927984386,0,-0.150367083334639,-0.492112842419989,0.346084090745534,-0.0361978946328979,0,-0.790080158389657,0,0,-0.258217410123783,-0.0298929136717952,0.534228984731047,0.0664985277593733,0.564687813310088,0.47122839443131,-0.115971073434934,0.449663264052159,0,-0.040718976579545,0,0,-0.156264799765872,-0.0636048451378017,-0.619783323958633,0.513324114298056,0,0.396554707380826,0,0,-0.177527765965176,0,0.040085674084607,0,0.60498136141318,0.154851272135476,0,0,0.442097220121693,0.60498136141318,0,0,0,0.205583124092593,0.102791562046296,0,0,0.0852913347788646,0.415793382303882,-0.354833330216448,0.205583124092593,-0.475995424260811,0,0,0,0,0,0.193591541328503,0,0,-0.743895689702636,-0.0983499796063438,-0.12301741567642,0,0,0.102791562046296,0,-0.215723402553475,0.14131269840735,0,0.63478774928718,0,0,0,0,0.119442134303382,0,1.02883110271347,0.102791562046296,0,0.971100645659803,0.607123503315441,0.205583124092593,0,0,0.670978693983358,0,0,0,0,0.306299372053808,0,0,0.101807048029343,0,0.25227809394963,-0.0815818795468414,0,0.027427692489327,-0.0540510699507091,-0.280789237934995,0,0,0.188316132262271,0,0,0.0610556869763954,0,0.205583124092593,0.102791562046296,0,0,0.102791562046296,0,0.344549260502074,1.86716060559953,0.130234748102318,0,0,0,0.102791562046296,0,1.22376549545869,0,0,0,0,0,0.142904485170625,0.357439207393648,0,0,0,0,0,0.275066192297334,0,0.148168607172134,0.134264982428045,0,0,0,0,0,0,0,0,0.194379833504846,0,0,1.31503637762146,0,0,0.437236623488442,0,0,0,1.02883110271347,0.731142090552123,0,0,0.489288323591297,0,0,0,0,0,0,0,0,0,0.534228984731047,0,0,0,-0.123319086035448,0.690099424398907,0,0,0,0,0,0,0,1.05929024533081,0,0.205583124092593,0,0,1.73131008945056,0,0,0,-0.104796384789156,0,0.184231230415688,0.449663264052159,0.205583124092593,0,0.30249068070659,0,0,0,0.102791562046296,0,0,0,0,0,0,0.172274630251037,0,0.449663264052159,0,0,0,0,-1.26041466061299,0.0709902215077315,0.0328541616082585,0.0070803096509251,0,0,-0.129836790586745,0,0,0,0,0,0.856880532215262,0.0714511380177695,0,0,0,0.71914862264248,0,0,0.102791562046296,0,0,0.766650455784811,0,0.205583124092593,0.102791562046296,0,0.0416139680802287,0,0,0.124150668161124,0.205583124092593,0,0,0.665805773168088,0,0.449663264052159,0,-0.061367927484915,0,0,0,0,0,0,0,0.246591364234016,0,0,1.130295309977,0,0,0,0,0,0,0.095348387235696,0.044402794249229,-0.0267231764915278,0.205583124092593,0,0.205583124092593,-0.054385572482455,0,0,-0.0472864191443745,0.205583124092593,-0.0667773874189013,0,0,1.0754444356266,0.148027962078154,0,0,0,0,0,0,0,0.102791562046296,0,0,0.205583124092593,0,0,0,0,0,0,0,0,0,0,0,0,0.635393567290634,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0.102791562046296,0,0,0,0.17227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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 56: | Line 79: | ||
|rna_weight_ug=4.01145 | |rna_weight_ug=4.01145 | ||
|sample_age=69 | |sample_age=69 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 68: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.59633612713643e-270!GO:0005737;cytoplasm;8.6055473189954e-149!GO:0005515;protein binding;1.82849212564803e-108!GO:0043226;organelle;1.34254407066862e-102!GO:0043229;intracellular organelle;5.95469657513532e-102!GO:0043227;membrane-bound organelle;2.34930233522225e-95!GO:0043231;intracellular membrane-bound organelle;3.77324714865476e-95!GO:0044444;cytoplasmic part;1.99354122051121e-85!GO:0044422;organelle part;4.36233662841215e-66!GO:0044446;intracellular organelle part;1.21309186275126e-64!GO:0032991;macromolecular complex;3.16104766427483e-55!GO:0044237;cellular metabolic process;1.62008877561304e-49!GO:0044238;primary metabolic process;8.92291155187569e-49!GO:0043170;macromolecule metabolic process;2.15650603202151e-48!GO:0003723;RNA binding;2.56768922058288e-47!GO:0019538;protein metabolic process;1.24191153776752e-45!GO:0044260;cellular macromolecule metabolic process;8.69703708207779e-41!GO:0030529;ribonucleoprotein complex;1.35315981432463e-40!GO:0044267;cellular protein metabolic process;2.7205314847252e-40!GO:0033036;macromolecule localization;3.71094947418549e-39!GO:0045184;establishment of protein localization;1.47804073606497e-38!GO:0015031;protein transport;2.52358302244156e-38!GO:0044428;nuclear part;3.21713108425743e-37!GO:0008104;protein localization;6.96955046174011e-37!GO:0016043;cellular component organization and biogenesis;3.35457110824908e-36!GO:0005829;cytosol;5.43727779881987e-36!GO:0005634;nucleus;9.80030384223902e-36!GO:0006915;apoptosis;1.73520355226085e-34!GO:0012501;programmed cell death;2.00584270796308e-34!GO:0006412;translation;2.00584270796308e-34!GO:0008219;cell death;1.43378892316468e-32!GO:0016265;death;1.43378892316468e-32!GO:0043233;organelle lumen;6.73293880939861e-31!GO:0031974;membrane-enclosed lumen;6.73293880939861e-31!GO:0043234;protein complex;2.05785322680144e-30!GO:0031090;organelle membrane;1.70349887346483e-28!GO:0046907;intracellular transport;3.41104030113483e-27!GO:0016071;mRNA metabolic process;2.16356442151083e-26!GO:0043283;biopolymer metabolic process;4.59402353411945e-26!GO:0006886;intracellular protein transport;6.25819810249128e-26!GO:0008134;transcription factor binding;6.93315466260357e-25!GO:0009059;macromolecule biosynthetic process;1.32111776873806e-24!GO:0009058;biosynthetic process;4.39870715592336e-24!GO:0044249;cellular biosynthetic process;4.84531851769012e-24!GO:0008380;RNA splicing;6.96231273581018e-24!GO:0031981;nuclear lumen;3.18131550463563e-23!GO:0042981;regulation of apoptosis;6.04167935905798e-23!GO:0006396;RNA processing;8.83007452718005e-23!GO:0065003;macromolecular complex assembly;1.0008993769967e-22!GO:0043067;regulation of programmed cell death;1.57166467056535e-22!GO:0010467;gene expression;3.39693356506786e-22!GO:0048523;negative regulation of cellular process;3.40933999659246e-22!GO:0006397;mRNA processing;9.43348616132092e-22!GO:0051649;establishment of cellular localization;2.13552692805912e-21!GO:0022607;cellular component assembly;2.22522490903911e-21!GO:0031967;organelle envelope;2.60685844595731e-21!GO:0005840;ribosome;3.84094987398573e-21!GO:0051641;cellular localization;4.29441671554412e-21!GO:0031975;envelope;5.08832133172127e-21!GO:0005739;mitochondrion;5.27715071880582e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.19406999473365e-20!GO:0048519;negative regulation of biological process;1.98740335288402e-20!GO:0000166;nucleotide binding;8.83165333866959e-20!GO:0033279;ribosomal subunit;9.17032725831488e-20!GO:0002376;immune system process;9.96399848485742e-20!GO:0003735;structural constituent of ribosome;1.01077170733071e-19!GO:0044445;cytosolic part;2.26672941764461e-19!GO:0016192;vesicle-mediated transport;5.11359929634394e-19!GO:0007243;protein kinase cascade;6.12855930085588e-19!GO:0005681;spliceosome;1.82280773080106e-17!GO:0048770;pigment granule;2.72702689633075e-17!GO:0042470;melanosome;2.72702689633075e-17!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.71062916102138e-17!GO:0043687;post-translational protein modification;7.88342433895013e-17!GO:0043412;biopolymer modification;1.17707713403908e-16!GO:0005654;nucleoplasm;1.17707713403908e-16!GO:0044429;mitochondrial part;3.19460704266848e-16!GO:0006464;protein modification process;3.98053109263058e-16!GO:0006366;transcription from RNA polymerase II promoter;5.16097594078737e-16!GO:0007242;intracellular signaling cascade;6.03740526764748e-16!GO:0006955;immune response;6.08705377164702e-16!GO:0044265;cellular macromolecule catabolic process;7.06459508162062e-16!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.14871668735721e-16!GO:0003712;transcription cofactor activity;2.05462099754526e-15!GO:0050789;regulation of biological process;2.77014924344007e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.80926998953401e-15!GO:0006119;oxidative phosphorylation;3.11005645783574e-15!GO:0006793;phosphorus metabolic process;3.65494806774922e-15!GO:0006796;phosphate metabolic process;3.65494806774922e-15!GO:0050794;regulation of cellular process;5.137417889996e-15!GO:0051246;regulation of protein metabolic process;9.72247120222754e-15!GO:0048522;positive regulation of cellular process;1.36871640729139e-14!GO:0006996;organelle organization and biogenesis;1.44294023766681e-14!GO:0009615;response to virus;1.47576018712453e-14!GO:0005773;vacuole;1.5107822041775e-14!GO:0043069;negative regulation of programmed cell death;1.59581889422403e-14!GO:0032553;ribonucleotide binding;1.75444886211992e-14!GO:0032555;purine ribonucleotide binding;1.75444886211992e-14!GO:0043066;negative regulation of apoptosis;1.89340249364192e-14!GO:0048518;positive regulation of biological process;2.35027574204483e-14!GO:0006950;response to stress;2.80712399572549e-14!GO:0006512;ubiquitin cycle;3.28321679424459e-14!GO:0043228;non-membrane-bound organelle;3.6852802568208e-14!GO:0043232;intracellular non-membrane-bound organelle;3.6852802568208e-14!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.41414820050354e-14!GO:0006913;nucleocytoplasmic transport;6.19611773534281e-14!GO:0044451;nucleoplasm part;6.87058524637083e-14!GO:0017076;purine nucleotide binding;8.59238796567864e-14!GO:0019941;modification-dependent protein catabolic process;8.63835230928791e-14!GO:0043632;modification-dependent macromolecule catabolic process;8.63835230928791e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;9.34582063502878e-14!GO:0006605;protein targeting;1.02761520318164e-13!GO:0051169;nuclear transport;1.31488896440346e-13!GO:0044257;cellular protein catabolic process;1.57284925961222e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.05031973009623e-13!GO:0043285;biopolymer catabolic process;2.23361775772619e-13!GO:0005794;Golgi apparatus;4.0443537303269e-13!GO:0005740;mitochondrial envelope;4.15061049415402e-13!GO:0016310;phosphorylation;5.20316043644592e-13!GO:0000323;lytic vacuole;5.43098657399169e-13!GO:0005764;lysosome;5.43098657399169e-13!GO:0065007;biological regulation;5.82356170218194e-13!GO:0031966;mitochondrial membrane;6.2058270748267e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.1163838469925e-13!GO:0006916;anti-apoptosis;8.80033808435942e-13!GO:0022618;protein-RNA complex assembly;1.0621897736522e-12!GO:0016462;pyrophosphatase activity;1.24631943440074e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.25988078599333e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.39859690935663e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;1.56339083512171e-12!GO:0017111;nucleoside-triphosphatase activity;1.69681451133196e-12!GO:0009057;macromolecule catabolic process;1.77002479144186e-12!GO:0019866;organelle inner membrane;2.02492528256074e-12!GO:0048468;cell development;1.0358465587583e-11!GO:0031324;negative regulation of cellular metabolic process;1.3204826322355e-11!GO:0044248;cellular catabolic process;1.55529976777439e-11!GO:0030163;protein catabolic process;2.00415573154819e-11!GO:0005768;endosome;2.14913556891077e-11!GO:0016874;ligase activity;2.33027241211345e-11!GO:0009967;positive regulation of signal transduction;2.46205903856309e-11!GO:0065009;regulation of a molecular function;2.50229962802031e-11!GO:0016604;nuclear body;2.84217221226658e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.91729818057203e-11!GO:0012505;endomembrane system;3.1320520884011e-11!GO:0009892;negative regulation of metabolic process;5.85694298751289e-11!GO:0016564;transcription repressor activity;1.1151481094122e-10!GO:0005783;endoplasmic reticulum;1.74487692165079e-10!GO:0015934;large ribosomal subunit;1.7616791297335e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.79192833391974e-10!GO:0015935;small ribosomal subunit;2.31551810865637e-10!GO:0009607;response to biotic stimulus;2.31551810865637e-10!GO:0008135;translation factor activity, nucleic acid binding;2.98215825373018e-10!GO:0016607;nuclear speck;3.80182383768691e-10!GO:0005524;ATP binding;3.94148990276702e-10!GO:0008092;cytoskeletal protein binding;4.18999932142867e-10!GO:0005743;mitochondrial inner membrane;4.2446660599365e-10!GO:0032559;adenyl ribonucleotide binding;5.4385330622783e-10!GO:0048193;Golgi vesicle transport;7.1708519625712e-10!GO:0044455;mitochondrial membrane part;7.76066463122833e-10!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.76066463122833e-10!GO:0016481;negative regulation of transcription;8.25018795441637e-10!GO:0003743;translation initiation factor activity;1.37528698175941e-09!GO:0051170;nuclear import;1.38146600428295e-09!GO:0006457;protein folding;1.94269445865664e-09!GO:0043065;positive regulation of apoptosis;2.00854169578091e-09!GO:0017038;protein import;2.29365529612398e-09!GO:0051186;cofactor metabolic process;2.38894151110492e-09!GO:0004842;ubiquitin-protein ligase activity;2.45692009223186e-09!GO:0019829;cation-transporting ATPase activity;2.49569830175061e-09!GO:0008639;small protein conjugating enzyme activity;2.56106894810693e-09!GO:0006606;protein import into nucleus;2.56345529929575e-09!GO:0030554;adenyl nucleotide binding;2.58547816799186e-09!GO:0006461;protein complex assembly;2.6030649999415e-09!GO:0043068;positive regulation of programmed cell death;3.08803303103979e-09!GO:0006413;translational initiation;4.10864537673964e-09!GO:0006446;regulation of translational initiation;4.59540907584032e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.94657949696333e-09!GO:0019787;small conjugating protein ligase activity;5.52756680216025e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.21202337351327e-09!GO:0031982;vesicle;8.33867555157966e-09!GO:0005635;nuclear envelope;1.0507216565163e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.120955978433e-08!GO:0007264;small GTPase mediated signal transduction;1.18312879701998e-08!GO:0019899;enzyme binding;1.21918095446568e-08!GO:0005746;mitochondrial respiratory chain;1.24182569682062e-08!GO:0006417;regulation of translation;1.287485136371e-08!GO:0009966;regulation of signal transduction;1.33349250673466e-08!GO:0030036;actin cytoskeleton organization and biogenesis;1.5756902101077e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.69388105863106e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.70206207155526e-08!GO:0003954;NADH dehydrogenase activity;1.70206207155526e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.70206207155526e-08!GO:0003713;transcription coactivator activity;1.81824171190405e-08!GO:0015986;ATP synthesis coupled proton transport;2.18995969613314e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.18995969613314e-08!GO:0016070;RNA metabolic process;2.79825955392254e-08!GO:0050790;regulation of catalytic activity;3.32034660049096e-08!GO:0006732;coenzyme metabolic process;3.37087891965325e-08!GO:0006917;induction of apoptosis;5.0109238761096e-08!GO:0031410;cytoplasmic vesicle;5.85644670601941e-08!GO:0009150;purine ribonucleotide metabolic process;6.7899711314791e-08!GO:0030029;actin filament-based process;7.18952736463098e-08!GO:0005770;late endosome;7.77404570146082e-08!GO:0012502;induction of programmed cell death;7.88876113931554e-08!GO:0003714;transcription corepressor activity;8.22041333735807e-08!GO:0031988;membrane-bound vesicle;9.27045852003988e-08!GO:0006163;purine nucleotide metabolic process;1.00442615940415e-07!GO:0006259;DNA metabolic process;1.27749092781135e-07!GO:0031965;nuclear membrane;1.32114652951707e-07!GO:0009889;regulation of biosynthetic process;1.46911154729053e-07!GO:0005525;GTP binding;1.6875764743327e-07!GO:0016563;transcription activator activity;1.74661660760663e-07!GO:0003676;nucleic acid binding;1.78929673127126e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.80843117686246e-07!GO:0000375;RNA splicing, via transesterification reactions;1.80843117686246e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.80843117686246e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.82787566045633e-07!GO:0000074;regulation of progression through cell cycle;2.17361018119983e-07!GO:0016044;membrane organization and biogenesis;2.24547533021681e-07!GO:0051726;regulation of cell cycle;2.39671902542763e-07!GO:0009056;catabolic process;2.54695973980907e-07!GO:0006954;inflammatory response;2.55258942321007e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.92748686248304e-07!GO:0008565;protein transporter activity;2.9648610420663e-07!GO:0016881;acid-amino acid ligase activity;3.0581968198919e-07!GO:0009259;ribonucleotide metabolic process;3.13350320132563e-07!GO:0009152;purine ribonucleotide biosynthetic process;3.18051917638196e-07!GO:0051082;unfolded protein binding;3.70329691517174e-07!GO:0007049;cell cycle;3.89257071292028e-07!GO:0031326;regulation of cellular biosynthetic process;3.9363749006031e-07!GO:0005793;ER-Golgi intermediate compartment;3.99915820596547e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.0920267575496e-07!GO:0003924;GTPase activity;4.4679020861552e-07!GO:0006164;purine nucleotide biosynthetic process;4.82488426545927e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.16446974379579e-07!GO:0046034;ATP metabolic process;6.22655637791471e-07!GO:0045786;negative regulation of progression through cell cycle;6.25304648228617e-07!GO:0006754;ATP biosynthetic process;6.36042694616554e-07!GO:0006753;nucleoside phosphate metabolic process;6.36042694616554e-07!GO:0030964;NADH dehydrogenase complex (quinone);6.80973196194411e-07!GO:0045271;respiratory chain complex I;6.80973196194411e-07!GO:0005747;mitochondrial respiratory chain complex I;6.80973196194411e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.00109954998166e-07!GO:0009055;electron carrier activity;9.32806522159473e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.18874763152847e-06!GO:0042775;organelle ATP synthesis coupled electron transport;1.28878040604658e-06!GO:0042773;ATP synthesis coupled electron transport;1.28878040604658e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.29329394461219e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.29329394461219e-06!GO:0044453;nuclear membrane part;1.36873349470641e-06!GO:0005730;nucleolus;1.45189280942796e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.52653031159372e-06!GO:0045892;negative regulation of transcription, DNA-dependent;1.90898079766059e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.93013192495123e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.08831947035132e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.08831947035132e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.1430685570105e-06!GO:0003779;actin binding;2.37691893360505e-06!GO:0044432;endoplasmic reticulum part;2.44395664744721e-06!GO:0005774;vacuolar membrane;2.64133107340307e-06!GO:0032561;guanyl ribonucleotide binding;2.66093441571271e-06!GO:0019001;guanyl nucleotide binding;2.66093441571271e-06!GO:0031252;leading edge;2.79825169187748e-06!GO:0051188;cofactor biosynthetic process;2.82320395337325e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.23999196353161e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.23999196353161e-06!GO:0009108;coenzyme biosynthetic process;3.23999196353161e-06!GO:0009260;ribonucleotide biosynthetic process;3.28900259446162e-06!GO:0006952;defense response;3.87696101615433e-06!GO:0044440;endosomal part;4.32717205099162e-06!GO:0010008;endosome membrane;4.32717205099162e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.59775844997466e-06!GO:0009141;nucleoside triphosphate metabolic process;5.83095692589952e-06!GO:0051789;response to protein stimulus;6.47471834759048e-06!GO:0006986;response to unfolded protein;6.47471834759048e-06!GO:0006897;endocytosis;7.13587666040399e-06!GO:0010324;membrane invagination;7.13587666040399e-06!GO:0042623;ATPase activity, coupled;7.46787614307886e-06!GO:0016887;ATPase activity;9.37562975306436e-06!GO:0009611;response to wounding;1.00100729137941e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.02592472454795e-05!GO:0004298;threonine endopeptidase activity;1.07962874074462e-05!GO:0032446;protein modification by small protein conjugation;1.21108608555245e-05!GO:0030097;hemopoiesis;1.25218703953106e-05!GO:0008047;enzyme activator activity;1.26027481269335e-05!GO:0030120;vesicle coat;1.277463361424e-05!GO:0030662;coated vesicle membrane;1.277463361424e-05!GO:0006752;group transfer coenzyme metabolic process;1.31834065560442e-05!GO:0009893;positive regulation of metabolic process;1.53236178622484e-05!GO:0016197;endosome transport;1.6159516188864e-05!GO:0044437;vacuolar part;1.69071822817693e-05!GO:0016567;protein ubiquitination;2.05837547826182e-05!GO:0048475;coated membrane;2.16040020638436e-05!GO:0030117;membrane coat;2.16040020638436e-05!GO:0030695;GTPase regulator activity;2.16994712118631e-05!GO:0045941;positive regulation of transcription;2.19451827423328e-05!GO:0051707;response to other organism;2.21293569560911e-05!GO:0050657;nucleic acid transport;2.30546389628159e-05!GO:0051236;establishment of RNA localization;2.30546389628159e-05!GO:0050658;RNA transport;2.30546389628159e-05!GO:0005765;lysosomal membrane;2.3100739979686e-05!GO:0045321;leukocyte activation;2.32105292714412e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.55083713598606e-05!GO:0005643;nuclear pore;2.71359275940425e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.10031892763683e-05!GO:0016787;hydrolase activity;3.29979572343952e-05!GO:0042802;identical protein binding;3.47391264830765e-05!GO:0006403;RNA localization;3.60888918749027e-05!GO:0008632;apoptotic program;3.81315524357196e-05!GO:0031980;mitochondrial lumen;4.42364633240264e-05!GO:0005759;mitochondrial matrix;4.42364633240264e-05!GO:0008283;cell proliferation;4.6881642151007e-05!GO:0019222;regulation of metabolic process;4.72018142726842e-05!GO:0030099;myeloid cell differentiation;5.11233238160401e-05!GO:0051336;regulation of hydrolase activity;5.34379303843322e-05!GO:0045893;positive regulation of transcription, DNA-dependent;5.36274810139204e-05!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;5.44956536248426e-05!GO:0051338;regulation of transferase activity;5.59426183089826e-05!GO:0046983;protein dimerization activity;7.1476144043527e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.58036252820379e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;8.05530041107451e-05!GO:0016301;kinase activity;8.17626771271283e-05!GO:0051427;hormone receptor binding;8.26878464841042e-05!GO:0043566;structure-specific DNA binding;9.89021856000585e-05!GO:0043549;regulation of kinase activity;0.000102445228484537!GO:0022402;cell cycle process;0.000113379573721546!GO:0006468;protein amino acid phosphorylation;0.00011355114306367!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.00011452331194229!GO:0005083;small GTPase regulator activity;0.000116313645737195!GO:0004674;protein serine/threonine kinase activity;0.000122244252533125!GO:0006613;cotranslational protein targeting to membrane;0.000123677403824753!GO:0032940;secretion by cell;0.000128581553933758!GO:0005789;endoplasmic reticulum membrane;0.000128854494329159!GO:0018193;peptidyl-amino acid modification;0.00013282514671241!GO:0045859;regulation of protein kinase activity;0.00013282514671241!GO:0005057;receptor signaling protein activity;0.000133609847477195!GO:0035257;nuclear hormone receptor binding;0.000135425730422766!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000136673504268825!GO:0045259;proton-transporting ATP synthase complex;0.000137390826876113!GO:0007259;JAK-STAT cascade;0.000141651513395036!GO:0046649;lymphocyte activation;0.000148068839021931!GO:0001726;ruffle;0.000148241214406497!GO:0006401;RNA catabolic process;0.000165710074525279!GO:0009060;aerobic respiration;0.000170721914956845!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000171194890068173!GO:0015399;primary active transmembrane transporter activity;0.000171194890068173!GO:0006323;DNA packaging;0.000184788540193432!GO:0042221;response to chemical stimulus;0.000204660542809527!GO:0005769;early endosome;0.000207428248142448!GO:0002521;leukocyte differentiation;0.000211555541336788!GO:0046822;regulation of nucleocytoplasmic transport;0.000211759716453717!GO:0031325;positive regulation of cellular metabolic process;0.0002147514259138!GO:0051028;mRNA transport;0.000216209728893598!GO:0022890;inorganic cation transmembrane transporter activity;0.000223860864041301!GO:0007265;Ras protein signal transduction;0.000236972964564954!GO:0048534;hemopoietic or lymphoid organ development;0.000257748110656344!GO:0042110;T cell activation;0.000262963192766065!GO:0002520;immune system development;0.00026994516712263!GO:0030532;small nuclear ribonucleoprotein complex;0.000280445511501173!GO:0005885;Arp2/3 protein complex;0.000305095705085144!GO:0044431;Golgi apparatus part;0.000324231540453938!GO:0008026;ATP-dependent helicase activity;0.000328772518228335!GO:0004386;helicase activity;0.000340865365977075!GO:0022415;viral reproductive process;0.000341889187781195!GO:0005798;Golgi-associated vesicle;0.00035583618887984!GO:0019221;cytokine and chemokine mediated signaling pathway;0.000369087256381426!GO:0043281;regulation of caspase activity;0.000386042009990626!GO:0046519;sphingoid metabolic process;0.000389716033391418!GO:0001775;cell activation;0.000394276580171796!GO:0016568;chromatin modification;0.000397126873689055!GO:0031902;late endosome membrane;0.000416891589691611!GO:0006402;mRNA catabolic process;0.000431078774148682!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000466280923796889!GO:0001816;cytokine production;0.000487016020404649!GO:0051168;nuclear export;0.000517911156141072!GO:0051223;regulation of protein transport;0.000521364689030169!GO:0046930;pore complex;0.00052648433251115!GO:0003702;RNA polymerase II transcription factor activity;0.000526739201658003!GO:0045333;cellular respiration;0.000530005224818334!GO:0009117;nucleotide metabolic process;0.000551303881406698!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000567112376786984!GO:0002757;immune response-activating signal transduction;0.000567481136901093!GO:0003697;single-stranded DNA binding;0.000616532908350399!GO:0019904;protein domain specific binding;0.000654059567551771!GO:0006672;ceramide metabolic process;0.000661546483365116!GO:0006818;hydrogen transport;0.000963384265070563!GO:0007050;cell cycle arrest;0.000967981643578798!GO:0060090;molecular adaptor activity;0.000987025261424524!GO:0005741;mitochondrial outer membrane;0.00108143875977415!GO:0051090;regulation of transcription factor activity;0.00110150434768932!GO:0033673;negative regulation of kinase activity;0.00110667607869214!GO:0006469;negative regulation of protein kinase activity;0.00110667607869214!GO:0015992;proton transport;0.00111983024338657!GO:0033157;regulation of intracellular protein transport;0.00113829023534167!GO:0042306;regulation of protein import into nucleus;0.00113829023534167!GO:0007010;cytoskeleton organization and biogenesis;0.00119313091811997!GO:0043492;ATPase activity, coupled to movement of substances;0.00120884833590352!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00127215771229675!GO:0005096;GTPase activator activity;0.00128728448604937!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00129216464439336!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00131336838962913!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00136569961329544!GO:0045637;regulation of myeloid cell differentiation;0.00136569961329544!GO:0065002;intracellular protein transport across a membrane;0.0013790942863649!GO:0016740;transferase activity;0.001405346159831!GO:0007041;lysosomal transport;0.00147235897328034!GO:0003724;RNA helicase activity;0.00152040439982867!GO:0016791;phosphoric monoester hydrolase activity;0.00152040439982867!GO:0003729;mRNA binding;0.00152040439982867!GO:0048471;perinuclear region of cytoplasm;0.0015231418721171!GO:0006919;caspase activation;0.00154652337729087!GO:0007005;mitochondrion organization and biogenesis;0.00156889185744409!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00159717150661571!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00162462895241426!GO:0002764;immune response-regulating signal transduction;0.00169389513115644!GO:0008361;regulation of cell size;0.00171898426650042!GO:0007040;lysosome organization and biogenesis;0.0017651346358027!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00190963939709128!GO:0006612;protein targeting to membrane;0.00203816558732549!GO:0051348;negative regulation of transferase activity;0.00203816558732549!GO:0030218;erythrocyte differentiation;0.00204335214899722!GO:0008383;manganese superoxide dismutase activity;0.00204335214899722!GO:0001315;age-dependent response to reactive oxygen species;0.00204335214899722!GO:0033116;ER-Golgi intermediate compartment membrane;0.00206164963268159!GO:0000245;spliceosome assembly;0.00206777474522765!GO:0006099;tricarboxylic acid cycle;0.00213800146677775!GO:0046356;acetyl-CoA catabolic process;0.00213800146677775!GO:0008637;apoptotic mitochondrial changes;0.00216008779055357!GO:0004860;protein kinase inhibitor activity;0.00223835517479348!GO:0008234;cysteine-type peptidase activity;0.00224039739879315!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00226664757773585!GO:0043623;cellular protein complex assembly;0.00229380543288853!GO:0043280;positive regulation of caspase activity;0.00229646813562315!GO:0007033;vacuole organization and biogenesis;0.00238612846236724!GO:0000151;ubiquitin ligase complex;0.00253740059613997!GO:0065004;protein-DNA complex assembly;0.00261373670262206!GO:0051187;cofactor catabolic process;0.00268886959465791!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00273248874362774!GO:0007034;vacuolar transport;0.00274145561607086!GO:0015629;actin cytoskeleton;0.00275847540838016!GO:0004672;protein kinase activity;0.00279087951258643!GO:0005637;nuclear inner membrane;0.00284964113299865!GO:0032386;regulation of intracellular transport;0.00286039004647809!GO:0045045;secretory pathway;0.0028890182711948!GO:0016049;cell growth;0.00296868589107581!GO:0042990;regulation of transcription factor import into nucleus;0.00301014636603137!GO:0042991;transcription factor import into nucleus;0.00301014636603137!GO:0051059;NF-kappaB binding;0.00306795849011681!GO:0030217;T cell differentiation;0.00316521646650048!GO:0008654;phospholipid biosynthetic process;0.00337534168387886!GO:0007165;signal transduction;0.00338712578972245!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00344324701699758!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0035126618362317!GO:0030133;transport vesicle;0.00353318844248975!GO:0048869;cellular developmental process;0.00353318844248975!GO:0030154;cell differentiation;0.00353318844248975!GO:0019210;kinase inhibitor activity;0.00366054351066066!GO:0005667;transcription factor complex;0.00386038030388567!GO:0051276;chromosome organization and biogenesis;0.00389107891858643!GO:0043085;positive regulation of catalytic activity;0.00431192415134102!GO:0031968;organelle outer membrane;0.0043273664235786!GO:0051345;positive regulation of hydrolase activity;0.00460289284153317!GO:0045792;negative regulation of cell size;0.00487653554882438!GO:0046631;alpha-beta T cell activation;0.00490891208922201!GO:0030027;lamellipodium;0.00511696204134768!GO:0006974;response to DNA damage stimulus;0.00553271684510167!GO:0019079;viral genome replication;0.00576936128172472!GO:0043433;negative regulation of transcription factor activity;0.00576936128172472!GO:0051051;negative regulation of transport;0.00580357062889642!GO:0051128;regulation of cellular component organization and biogenesis;0.00585097863304383!GO:0030308;negative regulation of cell growth;0.00585097863304383!GO:0030041;actin filament polymerization;0.00588976344816669!GO:0045454;cell redox homeostasis;0.00588976344816669!GO:0019867;outer membrane;0.00597488440323795!GO:0006084;acetyl-CoA metabolic process;0.00601570113273553!GO:0005070;SH3/SH2 adaptor activity;0.00621295114186825!GO:0006979;response to oxidative stress;0.00621394649646341!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.00633453558193703!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00639599244416606!GO:0030149;sphingolipid catabolic process;0.00646104829111463!GO:0000139;Golgi membrane;0.00659783253317468!GO:0042127;regulation of cell proliferation;0.00662167890210979!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00677267474019777!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00677267474019777!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00677267474019777!GO:0051049;regulation of transport;0.00694625960481106!GO:0050900;leukocyte migration;0.00701571081655568!GO:0005791;rough endoplasmic reticulum;0.00715318099512847!GO:0031323;regulation of cellular metabolic process;0.00715318099512847!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00740063739280278!GO:0009109;coenzyme catabolic process;0.00742592359157626!GO:0005788;endoplasmic reticulum lumen;0.00764477732016918!GO:0030098;lymphocyte differentiation;0.00766731018705592!GO:0006935;chemotaxis;0.00766731018705592!GO:0042330;taxis;0.00766731018705592!GO:0005761;mitochondrial ribosome;0.00779822739354602!GO:0000313;organellar ribosome;0.00779822739354602!GO:0015631;tubulin binding;0.00785107081398725!GO:0006333;chromatin assembly or disassembly;0.00788943297880804!GO:0004185;serine carboxypeptidase activity;0.00801112105815339!GO:0006607;NLS-bearing substrate import into nucleus;0.00805390999807747!GO:0006643;membrane lipid metabolic process;0.00814279201737166!GO:0002252;immune effector process;0.00817643966825982!GO:0005048;signal sequence binding;0.00823978562471608!GO:0000060;protein import into nucleus, translocation;0.00837771060145926!GO:0048487;beta-tubulin binding;0.00837771060145926!GO:0046966;thyroid hormone receptor binding;0.00838987455239857!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00838987455239857!GO:0004812;aminoacyl-tRNA ligase activity;0.00838987455239857!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00838987455239857!GO:0001558;regulation of cell growth;0.00838987455239857!GO:0033367;protein localization in mast cell secretory granule;0.00838987455239857!GO:0033365;protein localization in organelle;0.00838987455239857!GO:0033371;T cell secretory granule organization and biogenesis;0.00838987455239857!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00838987455239857!GO:0033375;protease localization in T cell secretory granule;0.00838987455239857!GO:0042629;mast cell granule;0.00838987455239857!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00838987455239857!GO:0033364;mast cell secretory granule organization and biogenesis;0.00838987455239857!GO:0033380;granzyme B localization in T cell secretory granule;0.00838987455239857!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00838987455239857!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00838987455239857!GO:0033368;protease localization in mast cell secretory granule;0.00838987455239857!GO:0033366;protein localization in secretory granule;0.00838987455239857!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00838987455239857!GO:0033374;protein localization in T cell secretory granule;0.00838987455239857!GO:0043021;ribonucleoprotein binding;0.00863040325008517!GO:0045646;regulation of erythrocyte differentiation;0.00876343516768527!GO:0008154;actin polymerization and/or depolymerization;0.00899384857746456!GO:0004197;cysteine-type endopeptidase activity;0.00905131670680926!GO:0003690;double-stranded DNA binding;0.00910468723634079!GO:0051092;activation of NF-kappaB transcription factor;0.00927628699845866!GO:0031901;early endosome membrane;0.00992826443437428!GO:0008186;RNA-dependent ATPase activity;0.00993185102330818!GO:0002684;positive regulation of immune system process;0.0100961133624424!GO:0019377;glycolipid catabolic process;0.0100961133624424!GO:0019058;viral infectious cycle;0.0100961133624424!GO:0005813;centrosome;0.0102395541818953!GO:0006984;ER-nuclear signaling pathway;0.0102735021135447!GO:0002682;regulation of immune system process;0.0103415327448483!GO:0006891;intra-Golgi vesicle-mediated transport;0.0106051997113324!GO:0008139;nuclear localization sequence binding;0.0107260269238765!GO:0042254;ribosome biogenesis and assembly;0.0107648783741541!GO:0016311;dephosphorylation;0.0107726905531747!GO:0030518;steroid hormone receptor signaling pathway;0.0108340900199931!GO:0050851;antigen receptor-mediated signaling pathway;0.010848014097426!GO:0048500;signal recognition particle;0.0110405583332632!GO:0009605;response to external stimulus;0.0112010171898729!GO:0016251;general RNA polymerase II transcription factor activity;0.0112143644660962!GO:0044262;cellular carbohydrate metabolic process;0.0113348035120652!GO:0046466;membrane lipid catabolic process;0.0114341429831783!GO:0043038;amino acid activation;0.0114604013244321!GO:0006418;tRNA aminoacylation for protein translation;0.0114604013244321!GO:0043039;tRNA aminoacylation;0.0114604013244321!GO:0000785;chromatin;0.0118521519225368!GO:0008286;insulin receptor signaling pathway;0.0123563579907967!GO:0030658;transport vesicle membrane;0.0124371129026523!GO:0009165;nucleotide biosynthetic process;0.0124922073990139!GO:0001836;release of cytochrome c from mitochondria;0.0128550341097491!GO:0043621;protein self-association;0.0137333232724461!GO:0048660;regulation of smooth muscle cell proliferation;0.0141129451043178!GO:0002250;adaptive immune response;0.0142160340556674!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0142160340556674!GO:0019220;regulation of phosphate metabolic process;0.0143994332516114!GO:0051174;regulation of phosphorus metabolic process;0.0143994332516114!GO:0030127;COPII vesicle coat;0.0145183920226732!GO:0012507;ER to Golgi transport vesicle membrane;0.0145183920226732!GO:0030134;ER to Golgi transport vesicle;0.014575717075694!GO:0004721;phosphoprotein phosphatase activity;0.0146487458935434!GO:0050778;positive regulation of immune response;0.0149059316084775!GO:0006260;DNA replication;0.0151132191865736!GO:0005152;interleukin-1 receptor antagonist activity;0.0151787073686517!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0151787073686517!GO:0050680;negative regulation of epithelial cell proliferation;0.015245782347603!GO:0030867;rough endoplasmic reticulum membrane;0.0152952118666288!GO:0030521;androgen receptor signaling pathway;0.0152952118666288!GO:0051091;positive regulation of transcription factor activity;0.0153542960162363!GO:0005099;Ras GTPase activator activity;0.0157145708648164!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0157587638334514!GO:0005905;coated pit;0.0158957206708433!GO:0006091;generation of precursor metabolites and energy;0.0158957206708433!GO:0048872;homeostasis of number of cells;0.0160453137509593!GO:0002467;germinal center formation;0.0160642879636275!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.016347369109846!GO:0004177;aminopeptidase activity;0.0164387498726603!GO:0030031;cell projection biogenesis;0.0165520312424217!GO:0030118;clathrin coat;0.0168688363478819!GO:0006611;protein export from nucleus;0.0169731667815431!GO:0001516;prostaglandin biosynthetic process;0.0173052141187859!GO:0046457;prostanoid biosynthetic process;0.0173052141187859!GO:0045926;negative regulation of growth;0.0183390630172245!GO:0019883;antigen processing and presentation of endogenous antigen;0.0190775279003875!GO:0009719;response to endogenous stimulus;0.0194250998340554!GO:0019843;rRNA binding;0.0198982091756581!GO:0046632;alpha-beta T cell differentiation;0.0201177534234971!GO:0030176;integral to endoplasmic reticulum membrane;0.0201579474483478!GO:0008333;endosome to lysosome transport;0.0203202501829966!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0203202501829966!GO:0045047;protein targeting to ER;0.0203202501829966!GO:0005138;interleukin-6 receptor binding;0.0203427088791254!GO:0030663;COPI coated vesicle membrane;0.0203835352759338!GO:0030126;COPI vesicle coat;0.0203835352759338!GO:0006458;'de novo' protein folding;0.0205138631880459!GO:0051084;'de novo' posttranslational protein folding;0.0205138631880459!GO:0046479;glycosphingolipid catabolic process;0.0205271284804533!GO:0032763;regulation of mast cell cytokine production;0.0205271284804533!GO:0032762;mast cell cytokine production;0.0205271284804533!GO:0003725;double-stranded RNA binding;0.0205271284804533!GO:0051101;regulation of DNA binding;0.0214749409411842!GO:0001819;positive regulation of cytokine production;0.0216638987220731!GO:0003727;single-stranded RNA binding;0.0219661140642014!GO:0001666;response to hypoxia;0.0220657282072897!GO:0008287;protein serine/threonine phosphatase complex;0.0221082229185902!GO:0031072;heat shock protein binding;0.0228530452389225!GO:0031625;ubiquitin protein ligase binding;0.0228530452389225!GO:0051098;regulation of binding;0.0228530452389225!GO:0004004;ATP-dependent RNA helicase activity;0.0228530452389225!GO:0043086;negative regulation of catalytic activity;0.0231199948791822!GO:0050776;regulation of immune response;0.0235289351799082!GO:0030674;protein binding, bridging;0.0235334043366921!GO:0030155;regulation of cell adhesion;0.0235334043366921!GO:0035035;histone acetyltransferase binding;0.0240973698527353!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0241392774983538!GO:0010468;regulation of gene expression;0.0243638755265228!GO:0030137;COPI-coated vesicle;0.0253252599613295!GO:0005815;microtubule organizing center;0.025443093485813!GO:0017022;myosin binding;0.025852319101228!GO:0005149;interleukin-1 receptor binding;0.0261262294303446!GO:0045746;negative regulation of Notch signaling pathway;0.0263573182427561!GO:0002274;myeloid leukocyte activation;0.0264852230418273!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0265865770038868!GO:0002224;toll-like receptor signaling pathway;0.0268737487756321!GO:0002221;pattern recognition receptor signaling pathway;0.0268737487756321!GO:0043022;ribosome binding;0.0274044494365079!GO:0050811;GABA receptor binding;0.0282967744196519!GO:0000082;G1/S transition of mitotic cell cycle;0.0283317889786399!GO:0017166;vinculin binding;0.0283728404189407!GO:0030100;regulation of endocytosis;0.0285834685211097!GO:0051247;positive regulation of protein metabolic process;0.0286083668142383!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.0291920585064275!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0294224950386848!GO:0006281;DNA repair;0.0312663714783387!GO:0043087;regulation of GTPase activity;0.0313220917951385!GO:0051056;regulation of small GTPase mediated signal transduction;0.0313223967362964!GO:0051920;peroxiredoxin activity;0.0319303156888165!GO:0008629;induction of apoptosis by intracellular signals;0.0319938553425107!GO:0046209;nitric oxide metabolic process;0.0326423722713148!GO:0006809;nitric oxide biosynthetic process;0.0326423722713148!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0326750393439486!GO:0005085;guanyl-nucleotide exchange factor activity;0.0328503267968222!GO:0001776;leukocyte homeostasis;0.0331056765650375!GO:0030660;Golgi-associated vesicle membrane;0.0332145700810916!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0333297452022497!GO:0051329;interphase of mitotic cell cycle;0.0334618692442834!GO:0001725;stress fiber;0.0336560472537966!GO:0032432;actin filament bundle;0.0336560472537966!GO:0006665;sphingolipid metabolic process;0.0338441620772159!GO:0007162;negative regulation of cell adhesion;0.0338441620772159!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.0339480012686872!GO:0046979;TAP2 binding;0.0341514741454662!GO:0046977;TAP binding;0.0341514741454662!GO:0046978;TAP1 binding;0.0341514741454662!GO:0005350;pyrimidine transmembrane transporter activity;0.0342451223665645!GO:0015855;pyrimidine transport;0.0342451223665645!GO:0015288;porin activity;0.0342451223665645!GO:0008017;microtubule binding;0.0342808416391989!GO:0001817;regulation of cytokine production;0.0345632954757719!GO:0051235;maintenance of localization;0.0346570819861603!GO:0032760;positive regulation of tumor necrosis factor production;0.034659042723623!GO:0051325;interphase;0.034659042723623!GO:0051252;regulation of RNA metabolic process;0.034659042723623!GO:0002263;cell activation during immune response;0.034659042723623!GO:0042093;T-helper cell differentiation;0.034659042723623!GO:0002366;leukocyte activation during immune response;0.034659042723623!GO:0002293;alpha-beta T cell differentiation during immune response;0.034659042723623!GO:0002294;CD4-positive, alpha-beta T cell differentiation during immune response;0.034659042723623!GO:0002285;lymphocyte activation during immune response;0.034659042723623!GO:0002292;T cell differentiation during immune response;0.034659042723623!GO:0002286;T cell activation during immune response;0.034659042723623!GO:0006368;RNA elongation from RNA polymerase II promoter;0.034893048538877!GO:0006414;translational elongation;0.0362865920778428!GO:0042832;defense response to protozoan;0.0366156213255059!GO:0002253;activation of immune response;0.0367739757596749!GO:0043407;negative regulation of MAP kinase activity;0.0370010415969169!GO:0030433;ER-associated protein catabolic process;0.0373093395522048!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0373093395522048!GO:0008285;negative regulation of cell proliferation;0.0376319309408683!GO:0045089;positive regulation of innate immune response;0.0378402500215712!GO:0045088;regulation of innate immune response;0.0378402500215712!GO:0004704;NF-kappaB-inducing kinase activity;0.0378819482623559!GO:0030503;regulation of cell redox homeostasis;0.0379230670349831!GO:0015980;energy derivation by oxidation of organic compounds;0.0380350714844237!GO:0006509;membrane protein ectodomain proteolysis;0.0382292234318046!GO:0033619;membrane protein proteolysis;0.0382292234318046!GO:0008624;induction of apoptosis by extracellular signals;0.0385676741081335!GO:0040008;regulation of growth;0.0385676741081335!GO:0030968;unfolded protein response;0.0386731615245429!GO:0000209;protein polyubiquitination;0.038888576065766!GO:0001562;response to protozoan;0.0389374094874532!GO:0006213;pyrimidine nucleoside metabolic process;0.0390065224864098!GO:0046426;negative regulation of JAK-STAT cascade;0.0390992067558021!GO:0004722;protein serine/threonine phosphatase activity;0.0391117313848374!GO:0048659;smooth muscle cell proliferation;0.0399274723991968!GO:0006354;RNA elongation;0.0399791473490027!GO:0051023;regulation of immunoglobulin secretion;0.0408720076779134!GO:0045994;positive regulation of translational initiation by iron;0.0408720076779134!GO:0051248;negative regulation of protein metabolic process;0.0409473238308264!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.040997495039145!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.040997495039145!GO:0045639;positive regulation of myeloid cell differentiation;0.0410267385565634!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0412893917605175!GO:0033043;regulation of organelle organization and biogenesis;0.0412893917605175!GO:0004896;hematopoietin/interferon-class (D200-domain) cytokine receptor activity;0.0413559060324328!GO:0000278;mitotic cell cycle;0.0417547282605773!GO:0046578;regulation of Ras protein signal transduction;0.0425979542012395!GO:0005856;cytoskeleton;0.0432325300464773!GO:0006352;transcription initiation;0.0432325300464773!GO:0008250;oligosaccharyl transferase complex;0.0432325300464773!GO:0005100;Rho GTPase activator activity;0.0432325300464773!GO:0033033;negative regulation of myeloid cell apoptosis;0.0432325300464773!GO:0001803;regulation of type III hypersensitivity;0.0432325300464773!GO:0032733;positive regulation of interleukin-10 production;0.0432325300464773!GO:0033025;regulation of mast cell apoptosis;0.0432325300464773!GO:0001805;positive regulation of type III hypersensitivity;0.0432325300464773!GO:0033023;mast cell homeostasis;0.0432325300464773!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0432325300464773!GO:0033032;regulation of myeloid cell apoptosis;0.0432325300464773!GO:0001802;type III hypersensitivity;0.0432325300464773!GO:0033028;myeloid cell apoptosis;0.0432325300464773!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0432325300464773!GO:0033026;negative regulation of mast cell apoptosis;0.0432325300464773!GO:0033024;mast cell apoptosis;0.0432325300464773!GO:0050727;regulation of inflammatory response;0.0432929448136811!GO:0031347;regulation of defense response;0.0432929448136811!GO:0004576;oligosaccharyl transferase activity;0.0434412563004188!GO:0005869;dynactin complex;0.0438786842576015!GO:0008656;caspase activator activity;0.044180909439794!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0449131632684859!GO:0045603;positive regulation of endothelial cell differentiation;0.0452352031260518!GO:0043488;regulation of mRNA stability;0.0452912060143547!GO:0043487;regulation of RNA stability;0.0452912060143547!GO:0008312;7S RNA binding;0.0452912060143547!GO:0006749;glutathione metabolic process;0.0452920273749394!GO:0016505;apoptotic protease activator activity;0.045715473727691!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.045811549399245!GO:0002819;regulation of adaptive immune response;0.045811549399245!GO:0042325;regulation of phosphorylation;0.0461257096025192!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0466778540365522!GO:0042088;T-helper 1 type immune response;0.0468207220237948!GO:0016363;nuclear matrix;0.0472342371040076!GO:0016504;protease activator activity;0.0474288400440289!GO:0045428;regulation of nitric oxide biosynthetic process;0.0474288400440289!GO:0051020;GTPase binding;0.0480153676454209!GO:0000165;MAPKKK cascade;0.0492751193660744!GO:0030119;AP-type membrane coat adaptor complex;0.0492751193660744!GO:0042405;nuclear inclusion body;0.0494773555968186!GO:0040029;regulation of gene expression, epigenetic;0.0496381000102847!GO:0045113;regulation of integrin biosynthetic process;0.0498018144422983!GO:0045112;integrin biosynthetic process;0.0498018144422983!GO:0016779;nucleotidyltransferase activity;0.0498018144422983!GO:0042108;positive regulation of cytokine biosynthetic process;0.0498018144422983!GO:0007266;Rho protein signal transduction;0.0499901201435447!GO:0051087;chaperone binding;0.0499901201435447 | |||
|sample_id=11865 | |sample_id=11865 | ||
|sample_note= | |sample_note= | ||
Line 75: | Line 100: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=IRF7:5.94401633276;IRF1,2:4.89048789;CEBPA,B_DDIT3:3.91174936677;NFE2:3.83500484567;FOS_FOS{B,L1}_JUN{B,D}:3.79745570187;HLF:3.76393128558;NFKB1_REL_RELA:3.761821566;NFE2L2:3.70919318803;BACH2:3.40220696504;DMAP1_NCOR{1,2}_SMARC:3.37890953295;FOSL2:3.12444881645;PAX2:2.97671667819;SPIB:2.80167982764;NFIL3:2.68982916851;NFATC1..3:2.6532145788;SPI1:2.59150775004;HMGA1,2:2.39176946178;ETS1,2:2.28579359317;FOXP3:2.27330063751;ATF5_CREB3:2.14596205012;TBP:2.12742340896;RXRA_VDR{dimer}:1.98459484333;STAT2,4,6:1.88027628298;PAX8:1.85744128387;NR1H4:1.84289812245;ALX4:1.82866045344;ATF6:1.82215486007;BPTF:1.68493507791;PAX3,7:1.64439393949;NFE2L1:1.60046801493;RUNX1..3:1.53306271979;ATF4:1.52416454741;FOXN1:1.52256936347;IKZF1:1.47027475423;JUN:1.45441121626;CDX1,2,4:1.44188037768;SREBF1,2:1.41378717287;EP300:1.33240676668;SRF:1.24387322671;ZBTB16:1.22170617268;POU5F1:1.20388969288;PDX1:1.181426929;NANOG{mouse}:1.13193007547;POU2F1..3:1.1292456845;CREB1:1.03856033637;PAX1,9:1.02424983442;PRDM1:1.01688036266;TFCP2:1.00433117305;FOXL1:0.967935246485;FOXO1,3,4:0.967569406902;STAT5{A,B}:0.910201413566;PITX1..3:0.902882015217;ELF1,2,4:0.827476862017;IKZF2:0.737838117447;TGIF1:0.7319899157;XBP1:0.63147139982;ATF2:0.627318821571;PPARG:0.621720088164;HMX1:0.602751223982;GLI1..3:0.568625885907;FOXD3:0.565992464327;HBP1_HMGB_SSRP1_UBTF:0.54945343041;EN1,2:0.504090108191;HSF1,2:0.446074552025;SMAD1..7,9:0.440412398999;TLX2:0.370892423093;DBP:0.349093350113;MAFB:0.326369956808;ALX1:0.27673843393;PAX4:0.233362493943;POU6F1:0.21469456255;RBPJ:0.17470442582;EGR1..3:0.130595714435;OCT4_SOX2{dimer}:0.107497984633;HIF1A:0.0893618236572;FOXM1:0.0623482622216;FOXP1:0.051465714206;POU3F1..4:-0.0163584165661;NR3C1:-0.0772507324799;GATA4:-0.0902879608349;NKX3-1:-0.139102617311;MEF2{A,B,C,D}:-0.162973804679;TFAP4:-0.206565534241;ESR1:-0.241670621872;MZF1:-0.268746236344;MYFfamily:-0.363765573344;RREB1:-0.369806428329;HOXA9_MEIS1:-0.375679027117;REST:-0.419170574812;HOX{A5,B5}:-0.457198004176;MED-1{core}:-0.486684776659;STAT1,3:-0.513353142652;TAL1_TCF{3,4,12}:-0.528505532027;ZNF384:-0.54817805141;ADNP_IRX_SIX_ZHX:-0.559219503857;FOX{D1,D2}:-0.636507313674;NKX2-2,8:-0.661929975493;NKX6-1,2:-0.665894226048;AHR_ARNT_ARNT2:-0.727923756755;TBX4,5:-0.736492288936;NR6A1:-0.766673535963;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.782234987499;HNF4A_NR2F1,2:-0.794807793433;MYB:-0.840357543706;CDC5L:-0.898422618622;SOX2:-0.90191572866;GTF2I:-0.9091911724;MTE{core}:-0.916446223064;SOX{8,9,10}:-0.919430628459;PATZ1:-0.920321810037;HES1:-0.942221631945;RFX2..5_RFXANK_RFXAP:-0.948952483798;ESRRA:-0.951687817432;RXR{A,B,G}:-0.953305933787;ZFP161:-0.985141860117;TEAD1:-0.986352077401;ZBTB6:-0.997230783511;GTF2A1,2:-1.00268031877;SP1:-1.0113822453;XCPE1{core}:-1.01404299839;NHLH1,2:-1.01429573728;TLX1..3_NFIC{dimer}:-1.02068497773;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.022231846;HNF1A:-1.08025855028;FOXA2:-1.10158723592;GCM1,2:-1.10953836229;ZEB1:-1.12629291763;MAZ:-1.12864197979;RORA:-1.1421259168;T:-1.14356160521;NANOG:-1.16133196961;ZNF148:-1.16393434723;VSX1,2:-1.18601796507;SPZ1:-1.2117831323;TFDP1:-1.21954318026;TFAP2{A,C}:-1.23830201465;PRRX1,2:-1.25316869508;SOX5:-1.26989756523;BREu{core}:-1.27067887086;GZF1:-1.2808696218;SNAI1..3:-1.29711037035;E2F1..5:-1.30220584097;NFIX:-1.32699466893;HOX{A4,D4}:-1.34857261963;TFAP2B:-1.40046408834;MTF1:-1.40320354192;NKX2-1,4:-1.41023529256;KLF4:-1.42934813693;FOX{F1,F2,J1}:-1.42988385884;PAX6:-1.4930890341;UFEwm:-1.54596608825;TP53:-1.54632294258;ZIC1..3:-1.59160124424;TOPORS:-1.64076400582;NKX2-3_NKX2-5:-1.64216692391;LMO2:-1.65670496713;HOX{A6,A7,B6,B7}:-1.66923750928;CUX2:-1.71983743892;GATA6:-1.72174780389;HIC1:-1.72652267402;CRX:-1.73642122082;ZNF238:-1.76901767994;NKX3-2:-1.81628267935;MYOD1:-1.82331818909;EBF1:-1.83275796505;POU1F1:-1.90237118644;MYBL2:-1.90848421851;RFX1:-1.90957587516;GFI1B:-1.91294560829;ONECUT1,2:-1.99019480784;AIRE:-2.16877728759;NFY{A,B,C}:-2.26393670274;TEF:-2.32281962045;ZNF423:-2.38053191883;PAX5:-2.38108907319;FOX{I1,J2}:-2.39904857936;ARID5B:-2.59926428203;SOX17:-2.60772849163;FOXQ1:-2.62440537727;bHLH_family:-2.67233247362;GFI1:-2.81531853783;EVI1:-2.8467306527;ELK1,4_GABP{A,B1}:-2.97441065867;YY1:-3.01150336256;PBX1:-3.02479582128;NR5A1,2:-3.03594363912;NRF1:-3.10887999201;LHX3,4:-3.13521611884;AR:-3.2302031286;HAND1,2:-3.43944901363;LEF1_TCF7_TCF7L1,2:-3.49565503555;ZNF143:-3.65177282041 | |top_motifs=IRF7:5.94401633276;IRF1,2:4.89048789;CEBPA,B_DDIT3:3.91174936677;NFE2:3.83500484567;FOS_FOS{B,L1}_JUN{B,D}:3.79745570187;HLF:3.76393128558;NFKB1_REL_RELA:3.761821566;NFE2L2:3.70919318803;BACH2:3.40220696504;DMAP1_NCOR{1,2}_SMARC:3.37890953295;FOSL2:3.12444881645;PAX2:2.97671667819;SPIB:2.80167982764;NFIL3:2.68982916851;NFATC1..3:2.6532145788;SPI1:2.59150775004;HMGA1,2:2.39176946178;ETS1,2:2.28579359317;FOXP3:2.27330063751;ATF5_CREB3:2.14596205012;TBP:2.12742340896;RXRA_VDR{dimer}:1.98459484333;STAT2,4,6:1.88027628298;PAX8:1.85744128387;NR1H4:1.84289812245;ALX4:1.82866045344;ATF6:1.82215486007;BPTF:1.68493507791;PAX3,7:1.64439393949;NFE2L1:1.60046801493;RUNX1..3:1.53306271979;ATF4:1.52416454741;FOXN1:1.52256936347;IKZF1:1.47027475423;JUN:1.45441121626;CDX1,2,4:1.44188037768;SREBF1,2:1.41378717287;EP300:1.33240676668;SRF:1.24387322671;ZBTB16:1.22170617268;POU5F1:1.20388969288;PDX1:1.181426929;NANOG{mouse}:1.13193007547;POU2F1..3:1.1292456845;CREB1:1.03856033637;PAX1,9:1.02424983442;PRDM1:1.01688036266;TFCP2:1.00433117305;FOXL1:0.967935246485;FOXO1,3,4:0.967569406902;STAT5{A,B}:0.910201413566;PITX1..3:0.902882015217;ELF1,2,4:0.827476862017;IKZF2:0.737838117447;TGIF1:0.7319899157;XBP1:0.63147139982;ATF2:0.627318821571;PPARG:0.621720088164;HMX1:0.602751223982;GLI1..3:0.568625885907;FOXD3:0.565992464327;HBP1_HMGB_SSRP1_UBTF:0.54945343041;EN1,2:0.504090108191;HSF1,2:0.446074552025;SMAD1..7,9:0.440412398999;TLX2:0.370892423093;DBP:0.349093350113;MAFB:0.326369956808;ALX1:0.27673843393;PAX4:0.233362493943;POU6F1:0.21469456255;RBPJ:0.17470442582;EGR1..3:0.130595714435;OCT4_SOX2{dimer}:0.107497984633;HIF1A:0.0893618236572;FOXM1:0.0623482622216;FOXP1:0.051465714206;POU3F1..4:-0.0163584165661;NR3C1:-0.0772507324799;GATA4:-0.0902879608349;NKX3-1:-0.139102617311;MEF2{A,B,C,D}:-0.162973804679;TFAP4:-0.206565534241;ESR1:-0.241670621872;MZF1:-0.268746236344;MYFfamily:-0.363765573344;RREB1:-0.369806428329;HOXA9_MEIS1:-0.375679027117;REST:-0.419170574812;HOX{A5,B5}:-0.457198004176;MED-1{core}:-0.486684776659;STAT1,3:-0.513353142652;TAL1_TCF{3,4,12}:-0.528505532027;ZNF384:-0.54817805141;ADNP_IRX_SIX_ZHX:-0.559219503857;FOX{D1,D2}:-0.636507313674;NKX2-2,8:-0.661929975493;NKX6-1,2:-0.665894226048;AHR_ARNT_ARNT2:-0.727923756755;TBX4,5:-0.736492288936;NR6A1:-0.766673535963;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.782234987499;HNF4A_NR2F1,2:-0.794807793433;MYB:-0.840357543706;CDC5L:-0.898422618622;SOX2:-0.90191572866;GTF2I:-0.9091911724;MTE{core}:-0.916446223064;SOX{8,9,10}:-0.919430628459;PATZ1:-0.920321810037;HES1:-0.942221631945;RFX2..5_RFXANK_RFXAP:-0.948952483798;ESRRA:-0.951687817432;RXR{A,B,G}:-0.953305933787;ZFP161:-0.985141860117;TEAD1:-0.986352077401;ZBTB6:-0.997230783511;GTF2A1,2:-1.00268031877;SP1:-1.0113822453;XCPE1{core}:-1.01404299839;NHLH1,2:-1.01429573728;TLX1..3_NFIC{dimer}:-1.02068497773;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.022231846;HNF1A:-1.08025855028;FOXA2:-1.10158723592;GCM1,2:-1.10953836229;ZEB1:-1.12629291763;MAZ:-1.12864197979;RORA:-1.1421259168;T:-1.14356160521;NANOG:-1.16133196961;ZNF148:-1.16393434723;VSX1,2:-1.18601796507;SPZ1:-1.2117831323;TFDP1:-1.21954318026;TFAP2{A,C}:-1.23830201465;PRRX1,2:-1.25316869508;SOX5:-1.26989756523;BREu{core}:-1.27067887086;GZF1:-1.2808696218;SNAI1..3:-1.29711037035;E2F1..5:-1.30220584097;NFIX:-1.32699466893;HOX{A4,D4}:-1.34857261963;TFAP2B:-1.40046408834;MTF1:-1.40320354192;NKX2-1,4:-1.41023529256;KLF4:-1.42934813693;FOX{F1,F2,J1}:-1.42988385884;PAX6:-1.4930890341;UFEwm:-1.54596608825;TP53:-1.54632294258;ZIC1..3:-1.59160124424;TOPORS:-1.64076400582;NKX2-3_NKX2-5:-1.64216692391;LMO2:-1.65670496713;HOX{A6,A7,B6,B7}:-1.66923750928;CUX2:-1.71983743892;GATA6:-1.72174780389;HIC1:-1.72652267402;CRX:-1.73642122082;ZNF238:-1.76901767994;NKX3-2:-1.81628267935;MYOD1:-1.82331818909;EBF1:-1.83275796505;POU1F1:-1.90237118644;MYBL2:-1.90848421851;RFX1:-1.90957587516;GFI1B:-1.91294560829;ONECUT1,2:-1.99019480784;AIRE:-2.16877728759;NFY{A,B,C}:-2.26393670274;TEF:-2.32281962045;ZNF423:-2.38053191883;PAX5:-2.38108907319;FOX{I1,J2}:-2.39904857936;ARID5B:-2.59926428203;SOX17:-2.60772849163;FOXQ1:-2.62440537727;bHLH_family:-2.67233247362;GFI1:-2.81531853783;EVI1:-2.8467306527;ELK1,4_GABP{A,B1}:-2.97441065867;YY1:-3.01150336256;PBX1:-3.02479582128;NR5A1,2:-3.03594363912;NRF1:-3.10887999201;LHX3,4:-3.13521611884;AR:-3.2302031286;HAND1,2:-3.43944901363;LEF1_TCF7_TCF7L1,2:-3.49565503555;ZNF143:-3.65177282041 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11865-125B2;search_select_hide=table117:FF:11865-125B2 | |||
}} | }} |
Latest revision as of 18:24, 4 June 2020
Name: | CD14+ monocytes - treated with lipopolysaccharide, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13470 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13470
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13470
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.12 |
10 | 10 | 0.0435 |
100 | 100 | 0.814 |
101 | 101 | 0.963 |
102 | 102 | 0.947 |
103 | 103 | 0.237 |
104 | 104 | 0.633 |
105 | 105 | 0.179 |
106 | 106 | 1.42232e-4 |
107 | 107 | 0.0542 |
108 | 108 | 0.866 |
109 | 109 | 0.549 |
11 | 11 | 0.127 |
110 | 110 | 0.205 |
111 | 111 | 0.0393 |
112 | 112 | 0.369 |
113 | 113 | 0.173 |
114 | 114 | 0.0307 |
115 | 115 | 0.204 |
116 | 116 | 0.846 |
117 | 117 | 0.187 |
118 | 118 | 0.296 |
119 | 119 | 0.13 |
12 | 12 | 0.28 |
120 | 120 | 0.763 |
121 | 121 | 0.737 |
122 | 122 | 0.877 |
123 | 123 | 0.323 |
124 | 124 | 0.642 |
125 | 125 | 0.133 |
126 | 126 | 0.243 |
127 | 127 | 0.426 |
128 | 128 | 0.0301 |
129 | 129 | 0.55 |
13 | 13 | 0.132 |
130 | 130 | 0.164 |
131 | 131 | 0.789 |
132 | 132 | 0.289 |
133 | 133 | 0.931 |
134 | 134 | 0.353 |
135 | 135 | 0.733 |
136 | 136 | 0.773 |
137 | 137 | 0.0223 |
138 | 138 | 0.413 |
139 | 139 | 0.131 |
14 | 14 | 0.473 |
140 | 140 | 0.305 |
141 | 141 | 0.31 |
142 | 142 | 0.418 |
143 | 143 | 0.0264 |
144 | 144 | 0.649 |
145 | 145 | 0.219 |
146 | 146 | 0.701 |
147 | 147 | 0.948 |
148 | 148 | 0.00647 |
149 | 149 | 0.664 |
15 | 15 | 0.182 |
150 | 150 | 0.348 |
151 | 151 | 0.44 |
152 | 152 | 0.387 |
153 | 153 | 0.494 |
154 | 154 | 0.841 |
155 | 155 | 0.96 |
156 | 156 | 0.944 |
157 | 157 | 0.354 |
158 | 158 | 0.0624 |
159 | 159 | 0.744 |
16 | 16 | 0.291 |
160 | 160 | 0.432 |
161 | 161 | 0.437 |
162 | 162 | 0.542 |
163 | 163 | 0.0583 |
164 | 164 | 0.134 |
165 | 165 | 0.0282 |
166 | 166 | 0.853 |
167 | 167 | 0.257 |
168 | 168 | 0.0726 |
169 | 169 | 0.0133 |
17 | 17 | 0.168 |
18 | 18 | 0.126 |
19 | 19 | 0.359 |
2 | 2 | 0.672 |
20 | 20 | 0.251 |
21 | 21 | 0.744 |
22 | 22 | 0.306 |
23 | 23 | 0.0151 |
24 | 24 | 0.589 |
25 | 25 | 0.573 |
26 | 26 | 0.0682 |
27 | 27 | 0.641 |
28 | 28 | 0.31 |
29 | 29 | 0.342 |
3 | 3 | 0.0941 |
30 | 30 | 0.491 |
31 | 31 | 0.528 |
32 | 32 | 0.888 |
33 | 33 | 0.226 |
34 | 34 | 0.589 |
35 | 35 | 0.121 |
36 | 36 | 0.118 |
37 | 37 | 0.117 |
38 | 38 | 0.344 |
39 | 39 | 0.648 |
4 | 4 | 0.991 |
40 | 40 | 0.312 |
41 | 41 | 0.0441 |
42 | 42 | 0.313 |
43 | 43 | 0.0192 |
44 | 44 | 0.715 |
45 | 45 | 0.584 |
46 | 46 | 0.172 |
47 | 47 | 0.558 |
48 | 48 | 0.471 |
49 | 49 | 0.106 |
5 | 5 | 0.328 |
50 | 50 | 0.948 |
51 | 51 | 0.513 |
52 | 52 | 0.185 |
53 | 53 | 0.438 |
54 | 54 | 0.325 |
55 | 55 | 0.422 |
56 | 56 | 0.566 |
57 | 57 | 0.853 |
58 | 58 | 0.141 |
59 | 59 | 0.174 |
6 | 6 | 0.677 |
60 | 60 | 0.023 |
61 | 61 | 0.758 |
62 | 62 | 0.0781 |
63 | 63 | 0.452 |
64 | 64 | 0.56 |
65 | 65 | 0.135 |
66 | 66 | 0.112 |
67 | 67 | 0.474 |
68 | 68 | 0.656 |
69 | 69 | 0.194 |
7 | 7 | 0.324 |
70 | 70 | 0.0521 |
71 | 71 | 0.0389 |
72 | 72 | 0.148 |
73 | 73 | 0.402 |
74 | 74 | 0.022 |
75 | 75 | 0.294 |
76 | 76 | 0.25 |
77 | 77 | 0.352 |
78 | 78 | 0.106 |
79 | 79 | 0.963 |
8 | 8 | 0.306 |
80 | 80 | 0.222 |
81 | 81 | 0.224 |
82 | 82 | 0.138 |
83 | 83 | 0.0341 |
84 | 84 | 0.0181 |
85 | 85 | 0.00941 |
86 | 86 | 0.107 |
87 | 87 | 0.943 |
88 | 88 | 0.838 |
89 | 89 | 0.174 |
9 | 9 | 0.24 |
90 | 90 | 0.119 |
91 | 91 | 0.254 |
92 | 92 | 0.187 |
93 | 93 | 0.84 |
94 | 94 | 0.086 |
95 | 95 | 0.896 |
96 | 96 | 0.104 |
97 | 97 | 0.547 |
98 | 98 | 0.116 |
99 | 99 | 0.172 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13470
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011108 human CD14-positive monocytes - treated with lipopolysaccharide sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000335 (LPS treatment sample)
0011108 (human CD14-positive monocytes - treated with lipopolysaccharide sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)