FFCP PHASE1:Hg19::chr10:104155012..104155023,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104155012..104155023,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:104155012..104155023,- | |description=CAGE_peak_at_chr10:104155012..104155023,- | ||
|id=chr10:104155012..104155023,- | |id=chr10:104155012..104155023,- | ||
|ontology_enrichment_celltype=CL:0000738!2.98e-48!140;CL:0000037!8.05e-37!172;CL:0000566!8.05e-37!172;CL:0000766!5.49e-36!76;CL:0000988!4.54e-34!182;CL:0002032!1.14e-33!165;CL:0000837!1.14e-33!165;CL:0002087!4.37e-32!119;CL:0002031!4.67e-32!124;CL:0002057!1.46e-28!42;CL:0000860!3.04e-26!45;CL:0000094!9.65e-24!8;CL:0000763!1.61e-21!112;CL:0000049!1.61e-21!112;CL:0000839!3.04e-21!70;CL:0000557!7.54e-21!71;CL:0002194!2.11e-18!63;CL:0000576!2.11e-18!63;CL:0000040!2.11e-18!63;CL:0000559!2.11e-18!63;CL:0002009!1.18e-17!65;CL:0000081!7.73e-17!11;CL:0000134!2.29e-15!358;CL:0002320!8.41e-15!365;CL:0000219!8.14e-13!390;CL:0000034!9.53e-12!444;CL:0000838!1.94e-11!52;CL:0000542!3.81e-11!53;CL:0000051!3.81e-11!53;CL:0000048!4.24e-11!430;CL:0000723!9.42e-11!436;CL:0000775!1.39e-10!3;CL:0000623!9.82e-10!3;CL:0000825!9.82e-10!3;CL:0000767!4.76e-09!3;CL:0002393!3.01e-08!9;CL:0002397!3.01e-08!9;CL:0000624!9.37e-08!6;CL:0000771!1.44e-07!2 | |ontology_enrichment_celltype=CL:0000738!2.98e-48!140;CL:0000037!8.05e-37!172;CL:0000566!8.05e-37!172;CL:0000766!5.49e-36!76;CL:0000988!4.54e-34!182;CL:0002032!1.14e-33!165;CL:0000837!1.14e-33!165;CL:0002087!4.37e-32!119;CL:0002031!4.67e-32!124;CL:0002057!1.46e-28!42;CL:0000860!3.04e-26!45;CL:0000094!9.65e-24!8;CL:0000763!1.61e-21!112;CL:0000049!1.61e-21!112;CL:0000839!3.04e-21!70;CL:0000557!7.54e-21!71;CL:0002194!2.11e-18!63;CL:0000576!2.11e-18!63;CL:0000040!2.11e-18!63;CL:0000559!2.11e-18!63;CL:0002009!1.18e-17!65;CL:0000081!7.73e-17!11;CL:0000134!2.29e-15!358;CL:0002320!8.41e-15!365;CL:0000219!8.14e-13!390;CL:0000034!9.53e-12!444;CL:0000838!1.94e-11!52;CL:0000542!3.81e-11!53;CL:0000051!3.81e-11!53;CL:0000048!4.24e-11!430;CL:0000723!9.42e-11!436;CL:0000775!1.39e-10!3;CL:0000623!9.82e-10!3;CL:0000825!9.82e-10!3;CL:0000767!4.76e-09!3;CL:0002393!3.01e-08!9;CL:0002397!3.01e-08!9;CL:0000624!9.37e-08!6;CL:0000771!1.44e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.66e-21;8!CL:0000775;2.90e-21;3!CL:0000860;1.17e-19;33!CL:0002057;1.17e-19;33!CL:0000623;1.41e-19;3!CL:0000766;2.48e-18;69!CL:0002393;8.45e-18;6!CL:0002397;8.45e-18;6!CL:0000081;1.93e-15;11!CL:0000771;1.07e-14;2!CL:0000576;1.11e-14;48!CL:0002087;6.14e-14;104!CL:0000473;1.13e-13;39!CL:0000234;1.13e-13;39!CL:0000763;9.18e-10;100!CL:0000738;1.83e-09;136!CL:0000226;1.86e-09;3!CL:0000842;1.86e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-37,136;CL:0000766,1.93e-35,72;CL:0000860,8.96e-32,42;CL:0002057,8.96e-32,42;CL:0000037,1.63e-29,168;CL:0000988,9.13e-28,177;CL:0000473,1.98e-27,48;CL:0000234,1.98e-27,48;CL:0002087,2.78e-27,115;CL:0002032,1.91e-26,161;CL:0000837,1.91e-26,161;CL:0002031,1.54e-23,120;CL:0000763,2.37e-22,108;CL:0000049,2.37e-22,108;CL:0000839,1.67e-21,66;CL:0002194,2.41e-21,59;CL:0000576,2.41e-21,59;CL:0000040,2.41e-21,59;CL:0000559,2.41e-21,59;CL:0000094,2.72e-21,8;CL:0000775,2.90e-21,3;CL:0000557,3.85e-21,67;CL:0002009,1.47e-20,61;CL:0000623,2.08e-19,3;CL:0000825,2.08e-19,3;CL:0000081,1.96e-15,11;CL:0000771,1.10e-14,2;CL:0002393,7.64e-12,9;CL:0002397,7.64e-12,9;CL:0000134,2.52e-11,354;CL:0002320,5.30e-11,361;CL:0000219,7.28e-10,386;CL:0000226,1.38e-09,3;CL:0000842,1.38e-09,3;CL:0000034,6.18e-09,441;CL:0000048,1.81e-08,427;CL:0000723,2.82e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.58e-18!80;UBERON:0002390!2.48e-16!102;UBERON:0003061!2.48e-16!102;UBERON:0001474!4.86e-16!86;UBERON:0002193!3.28e-14!112;UBERON:0002384!4.94e-14!375;UBERON:0004765!7.60e-14!101;UBERON:0001434!7.60e-14!101;UBERON:0002405!2.60e-11!115 | |ontology_enrichment_uberon=UBERON:0002371!9.58e-18!80;UBERON:0002390!2.48e-16!102;UBERON:0003061!2.48e-16!102;UBERON:0001474!4.86e-16!86;UBERON:0002193!3.28e-14!112;UBERON:0002384!4.94e-14!375;UBERON:0004765!7.60e-14!101;UBERON:0001434!7.60e-14!101;UBERON:0002405!2.60e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.71e-18,76;UBERON:0002390,1.57e-17,98;UBERON:0003061,1.57e-17,98;UBERON:0001474,9.72e-17,82;UBERON:0002193,1.38e-15,108;UBERON:0004765,5.52e-15,90;UBERON:0002405,2.10e-14,93;UBERON:0001434,3.49e-13,100;UBERON:0002384,1.46e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.21598163412751,6.41742231904453,8.89744569934992,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.47296445977717,2.06847408441971,2.5819387343353,0,0,0.272906150057846,0.224723484445085,3.06083892370903,1.60464513538047,2.55734850319616,0,0.199463657621632,0,3.19230162491442,1.70215567407342,3.11411124497787,0,0,0,2.42159801053347,1.84138817993782,3.48108626184973,0.211255286311942,1.06302149982522,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,2.64342657158052,0.560508562981536,0,0.393419540227666,1.17903228824749,0.616804496998528,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,1.50939302401662,2.05348858047597,0,0,0,0,0,9.73709131131337,11.966458368161,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.21598163412751,6.41742231904453,8.89744569934992,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.47296445977717,2.06847408441971,2.5819387343353,0,0,0.272906150057846,0.224723484445085,3.06083892370903,1.60464513538047,2.55734850319616,0,0.199463657621632,0,3.19230162491442,1.70215567407342,3.11411124497787,0,0,0,2.42159801053347,1.84138817993782,3.48108626184973,0.211255286311942,1.06302149982522,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,2.64342657158052,0.560508562981536,0,0.393419540227666,1.17903228824749,0.616804496998528,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,1.50939302401662,2.05348858047597,0,0,0,0,0,9.73709131131337,11.966458368161,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:104155012..104155023,- | |short_description=p@chr10:104155012..104155023,- | ||
}} | }} |
Latest revision as of 09:45, 23 July 2015
Short description: | p@chr10:104155012..104155023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104155012..104155023, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.71e-18 | 76 |
hematopoietic system | 1.57e-17 | 98 |
blood island | 1.57e-17 | 98 |
bone element | 9.72e-17 | 82 |
hemolymphoid system | 1.38e-15 | 108 |
skeletal element | 5.52e-15 | 90 |
immune system | 2.10e-14 | 93 |
skeletal system | 3.49e-13 | 100 |
connective tissue | 1.46e-10 | 371 |