FFCP PHASE1:Hg19::chr17:38644869..38644880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84951 | |EntrezGene=84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24352 | |HGNC=24352 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZW8 | |UniProt=Q8IZW8 | ||
|association_with_transcript=291bp_to_AK027856_5end | |association_with_transcript=291bp_to_AK027856_5end | ||
|cluster_id=chr17:38644869..38644880,- | |||
|coexpression_cluster_id=C436 | |||
|description=CAGE_peak_6_at_TNS4_5end | |description=CAGE_peak_6_at_TNS4_5end | ||
|id=chr17:38644869..38644880,- | |id=chr17:38644869..38644880,- | ||
|ontology_enrichment_celltype=CL:0002076!1.91e-29!43;CL:0000066!9.84e-28!254;CL:0000223!1.94e-22!59;CL:0002368!7.66e-16!13;CL:0002251!6.19e-14!21;CL:0002159!5.13e-13!13;CL:0000622!9.02e-12!5;CL:0000154!1.04e-09!6;CL:0000244!1.80e-09!4;CL:0000731!1.80e-09!4;CL:0002202!9.69e-09!9;CL:0002632!9.69e-09!9;CL:0000068!8.57e-08!3;CL:0000069!8.57e-08!3;CL:0000307!8.57e-08!3;CL:0000377!8.57e-08!3;CL:0002623!2.13e-07!3;CL:0000362!2.52e-07!8;CL:0002541!2.75e-07!3;CL:0002231!3.12e-07!3;CL:0002621!9.12e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.91e-29!43;CL:0000066!9.84e-28!254;CL:0000223!1.94e-22!59;CL:0002368!7.66e-16!13;CL:0002251!6.19e-14!21;CL:0002159!5.13e-13!13;CL:0000622!9.02e-12!5;CL:0000154!1.04e-09!6;CL:0000244!1.80e-09!4;CL:0000731!1.80e-09!4;CL:0002202!9.69e-09!9;CL:0002632!9.69e-09!9;CL:0000068!8.57e-08!3;CL:0000069!8.57e-08!3;CL:0000307!8.57e-08!3;CL:0000377!8.57e-08!3;CL:0002623!2.13e-07!3;CL:0000362!2.52e-07!8;CL:0002541!2.75e-07!3;CL:0002231!3.12e-07!3;CL:0002621!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.79e-31;13!CL:0002076;2.63e-26;42!CL:0002159;1.55e-23;14!CL:0000622;5.21e-18;5!CL:0000307;5.97e-17;3!CL:0000362;3.60e-15;9!CL:0000154;4.95e-15;6!CL:0002202;5.58e-15;9!CL:0002632;5.58e-15;9!CL:0000240;1.62e-14;6!CL:0000311;1.62e-14;6!CL:0000079;1.62e-14;6!CL:0000237;1.62e-14;6!CL:0000244;1.36e-12;4!CL:0000731;1.36e-12;4!CL:0000317;1.54e-12;2!CL:1000448;1.54e-12;2!CL:0002308;1.54e-12;2!CL:0002140;1.54e-12;2!CL:0000575;1.05e-11;2!CL:0002077;1.37e-10;34!CL:0000312;3.11e-10;5!CL:0000150;4.72e-10;9!CL:0002251;4.56e-09;20!CL:0002231;1.72e-08;3!CL:0002328;3.08e-08;3!CL:0002623;4.40e-08;3!CL:0002541;4.89e-08;3!CL:0000349;8.47e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.78e-33,42;CL:0002368,1.32e-31,13;CL:0002159,1.58e-23,14;CL:0000223,7.85e-23,58;CL:0000622,5.45e-18,5;CL:0000068,7.62e-17,3;CL:0000069,7.62e-17,3;CL:0000307,7.62e-17,3;CL:0000377,7.62e-17,3;CL:0000066,1.63e-16,253;CL:0000362,3.88e-15,9;CL:0000154,5.14e-15,6;CL:0002202,5.51e-15,9;CL:0002632,5.51e-15,9;CL:0000240,2.19e-14,6;CL:0000311,2.19e-14,6;CL:0000079,2.19e-14,6;CL:0000237,2.19e-14,6;CL:0000036,2.19e-14,6;CL:0000357,2.19e-14,6;CL:0000114,2.19e-14,6;CL:0000244,9.90e-13,4;CL:0000731,9.90e-13,4;CL:0000317,1.55e-12,2;CL:1000448,1.55e-12,2;CL:0002308,1.55e-12,2;CL:0002140,1.55e-12,2;CL:0000575,7.64e-12,2;CL:0002077,2.96e-11,34;CL:0000312,3.37e-10,5;CL:0000150,4.83e-10,9;CL:0002251,4.91e-09,20;CL:0002321,9.35e-09,250;CL:0002231,1.72e-08,3;CL:0002328,2.57e-08,3;CL:0002623,4.56e-08,3;CL:0002541,4.89e-08,3;CL:0000349,8.92e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;5.97e-17;3!CL:0000357;1.62e-14;6!CL:0000114;1.62e-14;6!CL:0000223;4.08e-14;58 | |||
|ontology_enrichment_disease=DOID:305!5.95e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.20e-23!169;UBERON:0000925!1.20e-23!169;UBERON:0006595!1.20e-23!169;UBERON:0001004!3.74e-22!72;UBERON:0000161!4.07e-20!35;UBERON:0005631!2.97e-16!14;UBERON:0000158!2.97e-16!14;UBERON:0000166!4.25e-16!21;UBERON:0001007!1.49e-14!155;UBERON:0001555!1.49e-14!155;UBERON:0007026!1.49e-14!155;UBERON:0000077!1.81e-14!130;UBERON:0000165!4.30e-13!28;UBERON:0000930!4.30e-13!28;UBERON:0000065!8.89e-13!53;UBERON:0001044!1.22e-12!6;UBERON:0003293!1.22e-12!6;UBERON:0003294!1.22e-12!6;UBERON:0010047!1.22e-12!6;UBERON:0000167!1.22e-12!6;UBERON:0003102!1.12e-11!95;UBERON:0004921!1.13e-11!129;UBERON:0004185!1.13e-11!129;UBERON:0000365!4.64e-11!5;UBERON:0003124!2.65e-10!7;UBERON:0001041!3.21e-10!98;UBERON:0001737!1.25e-09!9;UBERON:0000072!1.64e-09!46;UBERON:0005910!3.96e-09!6;UBERON:0008947!1.92e-08!38;UBERON:0003258!1.92e-08!38;UBERON:0000478!2.22e-08!24;UBERON:0001444!2.33e-08!48;UBERON:0001557!4.84e-08!19;UBERON:0002530!7.44e-08!59;UBERON:0000305!1.08e-07!7;UBERON:0000078!1.37e-07!18;UBERON:0002365!1.79e-07!31;UBERON:0002330!1.79e-07!31;UBERON:0000344!2.55e-07!12;UBERON:0000476!2.75e-07!3;UBERON:0000920!2.75e-07!3;UBERON:0003408!3.13e-07!10;UBERON:0004923!3.62e-07!57;UBERON:0003729!5.03e-07!5;UBERON:0007196!8.03e-07!14;UBERON:0001558!8.03e-07!14;UBERON:0001949!9.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.79e-13;10!UBERON:0000158;3.79e-13;10!UBERON:0002419;1.54e-12;2!UBERON:0007771;1.54e-12;2!UBERON:0003297;1.54e-12;2!UBERON:0001821;1.54e-12;2!UBERON:0003487;1.54e-12;2!UBERON:0001820;1.54e-12;2!UBERON:0000365;3.59e-10;5!UBERON:0001003;5.39e-09;15!UBERON:0007376;5.39e-09;15!UBERON:0007196;6.95e-09;15!UBERON:0001558;6.95e-09;15!UBERON:0005910;1.50e-08;6!UBERON:0004815;3.08e-08;3!UBERON:0002031;3.08e-08;3!UBERON:0003124;4.89e-08;3!UBERON:0000920;4.89e-08;3!UBERON:0003126;1.57e-07;7!UBERON:0001005;1.57e-07;7!UBERON:0000305;2.17e-07;7!UBERON:0000486;3.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.55e-12,2;UBERON:0007771,1.55e-12,2;UBERON:0003297,1.55e-12,2;UBERON:0001821,1.55e-12,2;UBERON:0003487,1.55e-12,2;UBERON:0001820,1.55e-12,2;UBERON:0005089,1.55e-12,2;UBERON:0005088,1.55e-12,2;UBERON:0003102,2.27e-10,99;UBERON:0000365,2.79e-10,5;UBERON:0001004,1.87e-09,74;UBERON:0005631,2.73e-09,14;UBERON:0000158,2.73e-09,14;UBERON:0001003,5.63e-09,15;UBERON:0007376,5.63e-09,15;UBERON:0007383,5.63e-09,15;UBERON:0007196,6.90e-09,15;UBERON:0001558,6.90e-09,15;UBERON:0004119,7.32e-09,160;UBERON:0000925,7.32e-09,160;UBERON:0006595,7.32e-09,160;UBERON:0005910,1.21e-08,6;UBERON:0004815,2.57e-08,3;UBERON:0002031,2.57e-08,3;UBERON:0000920,4.89e-08,3;UBERON:0003126,1.74e-07,7;UBERON:0001005,1.74e-07,7;UBERON:0000305,2.37e-07,7 | |||
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| ||
|short_description=p6@TNS4 | |short_description=p6@TNS4 | ||
}} | }} |
Latest revision as of 02:09, 20 September 2015
Short description: | p6@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNS4_5end |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | 291bp_to_AK027856_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.55e-12 | 2 |
epidermis gland | 1.55e-12 | 2 |
gland of integumental system | 1.55e-12 | 2 |
sebaceous gland | 1.55e-12 | 2 |
skin sebaceous gland | 1.55e-12 | 2 |
sweat gland | 1.55e-12 | 2 |
sweat gland placode | 1.55e-12 | 2 |
sebaceous gland placode | 1.55e-12 | 2 |
surface structure | 2.27e-10 | 99 |
urothelium | 2.79e-10 | 5 |
respiratory system | 1.87e-09 | 74 |
extraembryonic membrane | 2.73e-09 | 14 |
membranous layer | 2.73e-09 | 14 |
skin epidermis | 5.63e-09 | 15 |
outer epithelium | 5.63e-09 | 15 |
enveloping layer of ectoderm | 5.63e-09 | 15 |
tracheobronchial tree | 6.90e-09 | 15 |
lower respiratory tract | 6.90e-09 | 15 |
endoderm-derived structure | 7.32e-09 | 160 |
endoderm | 7.32e-09 | 160 |
presumptive endoderm | 7.32e-09 | 160 |
transitional epithelium | 1.21e-08 | 6 |
lower respiratory tract epithelium | 2.57e-08 | 3 |
epithelium of bronchus | 2.57e-08 | 3 |
egg chorion | 4.89e-08 | 3 |
trachea | 1.74e-07 | 7 |
respiratory airway | 1.74e-07 | 7 |
amnion | 2.37e-07 | 7 |