FFCP PHASE1:Hg19::chr10:90529283..90529303,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:90529283..90529303,+
|short_description=p@chr10:90529283..90529303,+
|description=CAGE_peak_at_chr10:90529283..90529303,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:90529283..90529303,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:90529283..90529303,+ | |||
|id=chr10:90529283..90529303,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.77e-100!42;CL:0000860!6.06e-93!45;CL:0000766!1.71e-77!76;CL:0002194!1.94e-62!63;CL:0000576!1.94e-62!63;CL:0000040!1.94e-62!63;CL:0000559!1.94e-62!63;CL:0002009!2.99e-60!65;CL:0000839!2.56e-55!70;CL:0000557!2.05e-54!71;CL:0000763!3.66e-54!112;CL:0000049!3.66e-54!112;CL:0000738!1.21e-49!140;CL:0000037!7.06e-42!172;CL:0000566!7.06e-42!172;CL:0002087!1.55e-40!119;CL:0000988!6.35e-39!182;CL:0002032!1.80e-38!165;CL:0000837!1.80e-38!165;CL:0002031!1.36e-32!124;CL:0000094!2.18e-25!8;CL:0000081!4.46e-18!11;CL:0000134!1.02e-14!358;CL:0002320!3.35e-14!365;CL:0000219!2.21e-12!390;CL:0000775!5.14e-11!3;CL:0000048!3.28e-10!430;CL:0000034!3.36e-10!444;CL:0000723!6.66e-10!436;CL:0000842!7.34e-10!3;CL:0000767!8.33e-10!3;CL:0002393!1.26e-08!9;CL:0002397!1.26e-08!9;CL:0000771!5.00e-08!2;CL:0000224!1.68e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.01e-61;33!CL:0002057;8.01e-61;33!CL:0000473;1.18e-44;39!CL:0000234;1.18e-44;39!CL:0000576;4.95e-33;48!CL:0000766;1.29e-21;69!CL:0000771;5.73e-17;2!CL:0000094;2.87e-16;8!CL:0000763;5.54e-15;100!CL:0000081;6.89e-12;11!CL:0000775;1.04e-11;3!CL:0000738;4.39e-10;136!CL:0002087;9.06e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.64e-59,42;CL:0002057,8.64e-59,42;CL:0000473,4.60e-51,48;CL:0000234,4.60e-51,48;CL:0000766,1.35e-49,72;CL:0002194,3.06e-40,59;CL:0000576,3.06e-40,59;CL:0000040,3.06e-40,59;CL:0000559,3.06e-40,59;CL:0002009,7.65e-39,61;CL:0000839,1.03e-35,66;CL:0000557,3.84e-35,67;CL:0000763,4.58e-32,108;CL:0000049,4.58e-32,108;CL:0000738,2.64e-27,136;CL:0002087,1.14e-21,115;CL:0000037,1.92e-21,168;CL:0002032,2.12e-20,161;CL:0000837,2.12e-20,161;CL:0000988,3.59e-20,177;CL:0002031,2.30e-18,120;CL:0000771,6.47e-17,2;CL:0000094,3.57e-16,8;CL:0000081,8.06e-12,11;CL:0000775,1.29e-11,3;CL:0000134,3.42e-08,354;CL:0002320,5.89e-08,361;CL:0000219,3.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-44;42!CL:0000049;1.27e-11;108!UBERON:0005425;3.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.77e-47!80;UBERON:0002390!2.55e-44!102;UBERON:0003061!2.55e-44!102;UBERON:0001474!2.37e-43!86;UBERON:0002193!1.80e-39!112;UBERON:0004765!1.51e-35!101;UBERON:0001434!1.51e-35!101;UBERON:0002405!4.29e-30!115;UBERON:0002204!7.57e-18!167;UBERON:0003081!1.06e-17!216;UBERON:0002384!1.69e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.67e-09;1!UBERON:0001785;3.67e-09;1!UBERON:0002464;3.67e-09;1!UBERON:0004904;3.67e-09;1!UBERON:0001021;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-30,76;UBERON:0002390,5.25e-29,98;UBERON:0003061,5.25e-29,98;UBERON:0001474,3.16e-28,82;UBERON:0002193,4.92e-26,108;UBERON:0004765,1.81e-25,90;UBERON:0002405,1.48e-24,93;UBERON:0001434,1.24e-22,100;UBERON:0002204,2.54e-12,167;UBERON:0003081,2.74e-12,203;UBERON:0000941,4.15e-09,1;UBERON:0001785,4.15e-09,1;UBERON:0002464,4.15e-09,1;UBERON:0004904,4.15e-09,1;UBERON:0001021,4.15e-09,1;UBERON:0003902,4.15e-09,1;UBERON:0005425,4.15e-09,1;UBERON:0002384,1.24e-07,371 | |||
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| ||
|short_description=p@chr10:90529283..90529303,+ | |||
}} | }} |
Latest revision as of 16:28, 23 July 2015
Short description: | p@chr10:90529283..90529303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90529283..90529303, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.64e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.64e-59 | 42 |
defensive cell | 4.60e-51 | 48 |
phagocyte | 4.60e-51 | 48 |
myeloid leukocyte | 1.35e-49 | 72 |
monopoietic cell | 3.06e-40 | 59 |
monocyte | 3.06e-40 | 59 |
monoblast | 3.06e-40 | 59 |
promonocyte | 3.06e-40 | 59 |
macrophage dendritic cell progenitor | 7.65e-39 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-35 | 66 |
granulocyte monocyte progenitor cell | 3.84e-35 | 67 |
myeloid cell | 4.58e-32 | 108 |
common myeloid progenitor | 4.58e-32 | 108 |
leukocyte | 2.64e-27 | 136 |
nongranular leukocyte | 1.14e-21 | 115 |
hematopoietic stem cell | 1.92e-21 | 168 |
hematopoietic oligopotent progenitor cell | 2.12e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-20 | 161 |
hematopoietic cell | 3.59e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 2.30e-18 | 120 |
eosinophil | 6.47e-17 | 2 |
granulocyte | 3.57e-16 | 8 |
blood cell | 8.06e-12 | 11 |
neutrophil | 1.29e-11 | 3 |
mesenchymal cell | 3.42e-08 | 354 |
connective tissue cell | 5.89e-08 | 361 |
motile cell | 3.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-30 | 76 |
hematopoietic system | 5.25e-29 | 98 |
blood island | 5.25e-29 | 98 |
bone element | 3.16e-28 | 82 |
hemolymphoid system | 4.92e-26 | 108 |
skeletal element | 1.81e-25 | 90 |
immune system | 1.48e-24 | 93 |
skeletal system | 1.24e-22 | 100 |
musculoskeletal system | 2.54e-12 | 167 |
lateral plate mesoderm | 2.74e-12 | 203 |
cranial nerve II | 4.15e-09 | 1 |
cranial nerve | 4.15e-09 | 1 |
nerve trunk | 4.15e-09 | 1 |
nerve connecting eye with brain | 4.15e-09 | 1 |
nerve | 4.15e-09 | 1 |
retinal neural layer | 4.15e-09 | 1 |
presumptive neural retina | 4.15e-09 | 1 |
connective tissue | 1.24e-07 | 371 |