FFCP PHASE1:Hg19::chr22:37823299..37823338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_ENST00000452946_5end | |association_with_transcript=141bp_to_ENST00000452946_5end | ||
|cluster_id=chr22:37823299..37823338,- | |||
|description=CAGE_peak_1_at_ENST00000452946_5end | |description=CAGE_peak_1_at_ENST00000452946_5end | ||
|id=chr22:37823299..37823338,- | |id=chr22:37823299..37823338,- | ||
|ontology_enrichment_celltype=CL:1000497!5.38e-10!18;CL:0002518!5.38e-10!18;CL:1000449!6.33e-09!16;CL:0002681!1.48e-07!13;CL:0002584!1.48e-07!13 | |ontology_enrichment_celltype=CL:1000497!5.38e-10!18;CL:0002518!5.38e-10!18;CL:1000449!6.33e-09!16;CL:0002681!1.48e-07!13;CL:0002584!1.48e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.32e-13;17!CL:0002518;2.32e-13;17!CL:1000449;3.05e-13;15!CL:0002681;9.58e-12;12!CL:0002584;9.58e-12;12!CL:1000746;7.80e-10;7!CL:1000612;7.80e-10;7!CL:1000507;1.42e-08;10!CL:1000494;1.42e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.36e-13,17;CL:0002518,2.36e-13,17;CL:1000449,3.42e-13,15;CL:0002681,1.29e-11,12;CL:0002584,1.29e-11,12;CL:1000746,9.85e-10,7;CL:1000612,9.85e-10,7;CL:1000507,1.35e-08,10;CL:1000494,1.35e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.95e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.82e-37;22!UBERON:0001950;1.82e-33;20!UBERON:0001869;4.02e-32;32!UBERON:0000956;5.56e-32;25!UBERON:0000203;5.56e-32;25!UBERON:0001893;1.93e-31;34!UBERON:0003528;3.80e-31;34!UBERON:0002020;3.80e-31;34!UBERON:0002791;7.34e-30;32!UBERON:0002780;1.96e-27;41!UBERON:0001890;1.96e-27;41!UBERON:0000073;6.18e-21;53!UBERON:0002616;6.18e-21;53!UBERON:0000955;9.89e-16;68!UBERON:0001017;1.20e-14;75!UBERON:0006555;3.05e-13;15!UBERON:0004819;3.05e-13;15!UBERON:0001285;3.05e-13;15!UBERON:0007684;3.05e-13;15!UBERON:0000200;9.10e-12;6!UBERON:0001225;9.58e-12;12!UBERON:0008987;9.58e-12;12!UBERON:0001851;7.43e-11;15!UBERON:0000349;1.13e-10;5!UBERON:0001016;1.39e-10;83!UBERON:0001871;2.28e-10;6!UBERON:0000074;7.80e-10;7!UBERON:0001229;7.80e-10;7!UBERON:0001872;8.64e-10;5!UBERON:0002021;1.14e-09;5!UBERON:0000353;5.77e-09;15!UBERON:0004211;1.42e-08;10!UBERON:0009773;1.42e-08;10!UBERON:0001231;1.42e-08;10!UBERON:0004810;1.42e-08;10!UBERON:0002113;1.48e-08;24!UBERON:0011143;1.48e-08;24!UBERON:0000489;6.15e-08;29!UBERON:0000369;5.02e-07;4!UBERON:0002435;5.02e-07;4!UBERON:0000204;5.02e-07;4!UBERON:0002420;7.17e-07;9!UBERON:0007245;7.17e-07;9!UBERON:0010009;7.17e-07;9!UBERON:0010011;7.17e-07;9!UBERON:0000454;7.17e-07;9!UBERON:0001870;7.62e-07;3 | |||
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| ||
|short_description=p1@ENST00000452946 | |short_description=p1@ENST00000452946 | ||
}} | }} |
Latest revision as of 20:57, 28 July 2015
Short description: | p1@ENST00000452946 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000452946_5end |
Coexpression cluster: | NA |
Association with transcript: | 141bp_to_ENST00000452946_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.36e-13 | 17 |
kidney epithelial cell | 2.36e-13 | 17 |
epithelial cell of nephron | 3.42e-13 | 15 |
kidney cortical cell | 1.29e-11 | 12 |
renal cortical epithelial cell | 1.29e-11 | 12 |
glomerular cell | 9.85e-10 | 7 |
kidney corpuscule cell | 9.85e-10 | 7 |
kidney tubule cell | 1.35e-08 | 10 |
nephron tubule epithelial cell | 1.35e-08 | 10 |