FFCP PHASE1:Hg19::chr3:195538781..195538786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4585 | |EntrezGene=4585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7514 | |HGNC=7514 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERK0,E7EQG8,E7EUL9,E7ENC5,E7EW47,E7ETT5,E7EWN1,E7EQT2 | |UniProt=E7ERK0,E7EQG8,E7EUL9,E7ENC5,E7EW47,E7ETT5,E7EWN1,E7EQT2 | ||
|association_with_transcript=-21bp_to_ENST00000462323,ENST00000466475,ENST00000470451,ENST00000475231,ENST00000477086,ENST00000477756,ENST00000478156,ENST00000479406,ENST00000480843_5end | |association_with_transcript=-21bp_to_ENST00000462323,ENST00000466475,ENST00000470451,ENST00000475231,ENST00000477086,ENST00000477756,ENST00000478156,ENST00000479406,ENST00000480843_5end | ||
|cluster_id=chr3:195538781..195538786,- | |||
|coexpression_cluster_id=C1270 | |||
|description=CAGE_peak_5_at_MUC4_5end | |description=CAGE_peak_5_at_MUC4_5end | ||
|id=chr3:195538781..195538786,- | |id=chr3:195538781..195538786,- | ||
|ontology_enrichment_celltype=CL:0000039!5.11e-14!7;CL:0000586!5.11e-14!7;CL:0000349!2.23e-08!3;CL:0002577!2.23e-08!3 | |ontology_enrichment_celltype=CL:0000039!5.11e-14!7;CL:0000586!5.11e-14!7;CL:0000349!2.23e-08!3;CL:0002577!2.23e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.23e-34;7!CL:0000586;1.23e-34;7!CL:1000415;4.46e-15;2!CL:1001319;2.69e-08;1!CL:1000600;2.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.46e-35,7;CL:0000586,7.46e-35,7;CL:1000415,6.35e-15,2;CL:1001319,2.89e-08,1;CL:1000600,2.89e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.85e-17;10!UBERON:0005564;2.85e-17;10 | |||
|ontology_enrichment_disease=DOID:1749!2.22e-10!14;DOID:305!4.80e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.02e-10;22!DOID:2994;1.02e-10;22!DOID:3111;1.57e-08;1!DOID:3603;1.57e-08;1!DOID:1749;4.68e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.18e-12,106;DOID:3095,8.81e-11,22;DOID:2994,8.81e-11,22;DOID:0050687,1.07e-10,143;DOID:3111,1.75e-08,1;DOID:3603,1.75e-08,1;DOID:1749,4.47e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-11!169;UBERON:0000925!1.35e-11!169;UBERON:0006595!1.35e-11!169;UBERON:0003133!2.21e-11!48;UBERON:0001987!1.73e-10!4;UBERON:0004340!1.73e-10!4;UBERON:0005156!1.36e-09!59;UBERON:0000990!1.36e-09!59;UBERON:0000464!4.09e-09!104;UBERON:0001007!1.94e-08!155;UBERON:0001555!1.94e-08!155;UBERON:0007026!1.94e-08!155;UBERON:0003135!2.80e-08!11;UBERON:0000077!3.48e-08!130;UBERON:0004921!3.68e-08!129;UBERON:0004185!3.68e-08!129;UBERON:0005631!4.57e-08!14;UBERON:0000158!4.57e-08!14;UBERON:0000466!4.75e-08!126;UBERON:0004175!5.63e-08!25;UBERON:0003975!1.31e-07!22;UBERON:0003127!9.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;4.16e-15;2!UBERON:0003127;5.32e-15;2!UBERON:0000473;4.76e-14;8!UBERON:0002110;2.36e-10;3!UBERON:0003135;2.91e-10;11!UBERON:0002294;1.00e-09;7!UBERON:0001173;1.00e-09;7!UBERON:0004913;1.17e-08;1!UBERON:0003703;1.17e-08;1!UBERON:0001174;1.17e-08;1!UBERON:0004914;1.17e-08;1!UBERON:0000997;1.57e-08;1!UBERON:0005056;1.57e-08;1!UBERON:0004176;1.57e-08;1!UBERON:0002372;2.09e-08;1!UBERON:0001961;2.09e-08;1!UBERON:0001744;2.09e-08;1!UBERON:0001042;2.09e-08;1!UBERON:0001735;2.09e-08;1!UBERON:0002323;2.68e-08;45!UBERON:0004645;2.69e-08;1!UBERON:0001256;2.69e-08;1!UBERON:0001259;2.69e-08;1!UBERON:0000991;3.99e-08;21!UBERON:0000996;4.72e-08;1!UBERON:0003133;1.35e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.61e-15,2;UBERON:0000473,4.09e-14,8;UBERON:0004176,5.53e-11,22;UBERON:0003135,2.61e-10,11;UBERON:0003133,2.77e-10,48;UBERON:0002110,2.98e-10,3;UBERON:0006242,2.98e-10,3;UBERON:0004913,1.13e-08,1;UBERON:0003703,1.13e-08,1;UBERON:0001174,1.13e-08,1;UBERON:0004914,1.13e-08,1;UBERON:0002323,1.46e-08,46;UBERON:0000997,1.52e-08,1;UBERON:0005056,1.52e-08,1;UBERON:0002372,2.33e-08,1;UBERON:0001961,2.33e-08,1;UBERON:0001744,2.33e-08,1;UBERON:0001735,2.33e-08,1;UBERON:0004645,2.89e-08,1;UBERON:0001256,2.89e-08,1;UBERON:0001259,2.89e-08,1;UBERON:0000991,3.82e-08,21;UBERON:0009196,3.82e-08,21;UBERON:0009117,3.82e-08,21;UBERON:0005564,3.82e-08,21;UBERON:0005156,4.16e-08,59;UBERON:0000990,4.16e-08,59;UBERON:0000996,5.43e-08,1;UBERON:0004458,5.72e-08,49;UBERON:0002294,1.28e-07,9;UBERON:0001173,1.28e-07,9;UBERON:0004912,1.28e-07,9;UBERON:0003886,3.96e-07,54;UBERON:0004119,7.88e-07,160;UBERON:0000925,7.88e-07,160;UBERON:0006595,7.88e-07,160 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.05817920982241,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0.718946809178615,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,1.84451123510448,1.34636466614658,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,3.98104772431402,1.23840590304675,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8016274733045,0.174118413160805,0.17472666824203,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0,8.60426084033133,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,5.63852017853338,0.533937062838473,1.41483874589699,0.414239055347196,0,0,0,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,5.76638736246476,0,0,0,0,0,0,0.992422356778588,0,3.83287282918786,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,1.07132363163395,0,2.64796510074255,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0,1.42784361638774,5.07713070004565,2.84874188558019,1.50424523575425,0,0,0,0,4.26467963801962,0.952257725854961,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0.342233301085281,3.03084238565644,5.88122084219946,1.66330178273007,2.44209805832924,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0 | ||
|short_description=p5@MUC4 | |short_description=p5@MUC4 | ||
}} | }} |
Latest revision as of 14:31, 17 September 2015
Short description: | p5@MUC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MUC4_5end |
Coexpression cluster: | C1270_papillotubular_gall_epidermoid_mucinous_trachea_throat_colon |
Association with transcript: | -21bp_to_ENST00000462323, ENST00000466475, ENST00000470451, ENST00000475231, ENST00000477086, ENST00000477756, ENST00000478156, ENST00000479406, ENST00000480843_5end |
EntrezGene: | MUC4 |
HGNC: | 7514 |
UniProt: | E7ERK0E7EQG8E7EUL9E7ENC5E7EW47E7ETT5E7EWN1E7EQT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.46e-35 | 7 |
germ cell | 7.46e-35 | 7 |
epithelial cell of gall bladder | 6.35e-15 | 2 |
bladder cell | 2.89e-08 | 1 |
lower urinary tract cell | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.18e-12 | 106 |
germ cell and embryonal cancer | 8.81e-11 | 22 |
germ cell cancer | 8.81e-11 | 22 |
cell type cancer | 1.07e-10 | 143 |
cystadenocarcinoma | 1.75e-08 | 1 |
mucinous cystadenocarcinoma | 1.75e-08 | 1 |
squamous cell carcinoma | 4.47e-08 | 14 |