FFCP PHASE1:Hg19::chr1:17528221..17528228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:17528221..17528228,- | |||
|description=CAGE_peak_at_chr1:17528221..17528228,- | |description=CAGE_peak_at_chr1:17528221..17528228,- | ||
|id=chr1:17528221..17528228,- | |id=chr1:17528221..17528228,- | ||
|ontology_enrichment_celltype=CL:0002603!8.73e-12!3;CL:1000507!3.59e-11!12;CL:1000494!3.59e-11!12;CL:1000497!1.16e-09!18;CL:0002518!1.16e-09!18;CL:0000632!7.02e-09!2;CL:1000449!3.42e-08!16;CL:0002681!3.30e-07!13;CL:0002584!3.30e-07!13 | |ontology_enrichment_celltype=CL:0002603!8.73e-12!3;CL:1000507!3.59e-11!12;CL:1000494!3.59e-11!12;CL:1000497!1.16e-09!18;CL:0002518!1.16e-09!18;CL:0000632!7.02e-09!2;CL:1000449!3.42e-08!16;CL:0002681!3.30e-07!13;CL:0002584!3.30e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.68e-30;10!CL:1000494;1.68e-30;10!CL:1000449;1.20e-20;15!CL:1000497;2.54e-18;17!CL:0002518;2.54e-18;17!CL:0000650;7.05e-18;2!CL:1000500;7.05e-18;2!CL:1000618;7.05e-18;2!CL:1001318;7.05e-18;2!CL:0002173;7.05e-18;2!CL:0000239;2.19e-12;3!CL:1000615;2.19e-12;3!CL:0002306;2.19e-12;3!CL:0000632;2.89e-12;3!CL:0002681;4.54e-12;12!CL:0002584;4.54e-12;12!CL:0000669;1.27e-09;4!CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.68e-30,10;CL:1000494,1.68e-30,10;CL:1000449,1.20e-20,15;CL:1000497,2.54e-18,17;CL:0002518,2.54e-18,17;CL:0000650,7.67e-18,2;CL:1000500,7.67e-18,2;CL:1000618,7.67e-18,2;CL:1001318,7.67e-18,2;CL:0002173,7.67e-18,2;CL:0000239,2.07e-12,3;CL:1000615,2.07e-12,3;CL:0002306,2.07e-12,3;CL:0000632,2.89e-12,3;CL:0002681,4.54e-12,12;CL:0002584,4.54e-12,12;CL:0000669,1.32e-09,4;CL:0000083,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!6.76e-09!2 | |ontology_enrichment_disease=DOID:4929!6.76e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.07e-17;2!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.27e-17,2;DOID:1793,1.70e-09,4;DOID:170,9.49e-07,6 | |||
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| ||
|short_description=p@chr1:17528221..17528228,- | |short_description=p@chr1:17528221..17528228,- | ||
}} | }} |
Latest revision as of 00:40, 28 July 2015
Short description: | p@chr1:17528221..17528228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:17528221..17528228, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.68e-30 | 10 |
nephron tubule epithelial cell | 1.68e-30 | 10 |
epithelial cell of nephron | 1.20e-20 | 15 |
kidney cell | 2.54e-18 | 17 |
kidney epithelial cell | 2.54e-18 | 17 |
mesangial cell | 7.67e-18 | 2 |
kidney interstitial cell | 7.67e-18 | 2 |
juxtaglomerular complex cell | 7.67e-18 | 2 |
renal interstitial pericyte | 7.67e-18 | 2 |
extraglomerular mesangial cell | 7.67e-18 | 2 |
brush border epithelial cell | 2.07e-12 | 3 |
kidney cortex tubule cell | 2.07e-12 | 3 |
epithelial cell of proximal tubule | 2.07e-12 | 3 |
hepatic stellate cell | 2.89e-12 | 3 |
kidney cortical cell | 4.54e-12 | 12 |
renal cortical epithelial cell | 4.54e-12 | 12 |
pericyte cell | 1.32e-09 | 4 |
epithelial cell of pancreas | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.27e-17 | 2 |
pancreatic cancer | 1.70e-09 | 4 |
endocrine gland cancer | 9.49e-07 | 6 |