FFCP PHASE1:Hg19::chr12:66218051..66218069,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:66218051..66218069,-
|short_description=p@chr12:66218051..66218069,-
|description=CAGE_peak_at_chr12:66218051..66218069,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:66218051..66218069,- | |||
|description=CAGE_peak_at_chr12:66218051..66218069,- | |||
|id=chr12:66218051..66218069,- | |||
|ontology_enrichment_celltype=CL:0002321!4.11e-12!248;CL:0000220!2.37e-11!246;CL:0000055!2.44e-11!180;CL:0000548!3.22e-11!679;CL:0000004!3.22e-11!679;CL:0000255!3.22e-11!679;CL:0000012!6.01e-11!682;CL:0002371!1.47e-09!591;CL:0002368!5.62e-08!13;CL:0000144!5.84e-08!625;CL:0000066!1.31e-07!254;CL:0000003!1.39e-07!722;CL:0002076!1.94e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.48e-22;3!CL:0002202;1.07e-20;9!CL:0002632;1.07e-20;9!CL:0002368;1.91e-20;13!CL:0002328;2.41e-11;3!CL:0002336;1.13e-08;1!CL:0002261;1.13e-08;1!CL:0002170;1.13e-08;1!CL:0002076;7.29e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-22,3;CL:0000069,2.89e-22,3;CL:0000307,2.89e-22,3;CL:0000377,2.89e-22,3;CL:0002202,1.50e-20,9;CL:0002632,1.50e-20,9;CL:0002368,2.56e-20,13;CL:0002328,2.29e-11,3;CL:0002076,2.87e-10,42;CL:0002336,2.22e-08,1;CL:0002261,2.22e-08,1;CL:0002170,2.22e-08,1;CL:0000223,3.91e-07,58;CL:0002321,4.28e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.48e-22;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.28e-10!82;UBERON:0005256!4.42e-10!143;UBERON:0002100!5.37e-09!216;UBERON:0000475!1.70e-08!365;UBERON:0003104!2.96e-08!238;UBERON:0009142!2.96e-08!238;UBERON:0000119!7.56e-08!312;UBERON:0000914!8.04e-08!83;UBERON:0002329!8.04e-08!83;UBERON:0003077!8.04e-08!83;UBERON:0003059!8.04e-08!83;UBERON:0007282!8.04e-08!83;UBERON:0009618!8.04e-08!83;UBERON:0007285!8.04e-08!83;UBERON:0000481!2.94e-07!347;UBERON:0003102!5.67e-07!95;UBERON:0000483!6.20e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.31e-12;15!UBERON:0001558;2.31e-12;15!UBERON:0004815;2.41e-11;3!UBERON:0002031;2.41e-11;3!UBERON:0003126;5.39e-10;7!UBERON:0001005;5.39e-10;7!UBERON:0000964;1.68e-08;4!UBERON:0010409;1.68e-08;4!UBERON:0002185;3.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,2.80e-12,15;UBERON:0001558,2.80e-12,15;UBERON:0004815,2.29e-11,3;UBERON:0002031,2.29e-11,3;UBERON:0003126,7.14e-10,7;UBERON:0001005,7.14e-10,7;UBERON:0000964,2.23e-08,4;UBERON:0010409,2.23e-08,4;UBERON:0004348,2.23e-08,4;UBERON:0005427,2.23e-08,4;UBERON:0005085,2.86e-08,31;UBERON:0002185,3.77e-07,5 | |||
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| ||
|short_description=p@chr12:66218051..66218069,- | |||
}} | }} |
Latest revision as of 11:27, 24 July 2015
Short description: | p@chr12:66218051..66218069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:66218051..66218069, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.89e-22 | 3 |
branched duct epithelial cell | 2.89e-22 | 3 |
tracheal epithelial cell | 2.89e-22 | 3 |
tracheoblast | 2.89e-22 | 3 |
epithelial cell of tracheobronchial tree | 1.50e-20 | 9 |
epithelial cell of lower respiratory tract | 1.50e-20 | 9 |
respiratory epithelial cell | 2.56e-20 | 13 |
bronchial epithelial cell | 2.29e-11 | 3 |
endo-epithelial cell | 2.87e-10 | 42 |
buccal mucosa cell | 2.22e-08 | 1 |
endothelial cell of viscerocranial mucosa | 2.22e-08 | 1 |
keratinized cell of the oral mucosa | 2.22e-08 | 1 |
endodermal cell | 3.91e-07 | 58 |
embryonic cell | 4.28e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 2.80e-12 | 15 |
lower respiratory tract | 2.80e-12 | 15 |
lower respiratory tract epithelium | 2.29e-11 | 3 |
epithelium of bronchus | 2.29e-11 | 3 |
trachea | 7.14e-10 | 7 |
respiratory airway | 7.14e-10 | 7 |
cornea | 2.23e-08 | 4 |
eye surface | 2.23e-08 | 4 |
optic eminence | 2.23e-08 | 4 |
corneal primordium | 2.23e-08 | 4 |
ectodermal placode | 2.86e-08 | 31 |
bronchus | 3.77e-07 | 5 |