FFCP PHASE1:Hg19::chr20:43767209..43767214,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43767209..43767214,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr20:43767209..43767214,- | |description=CAGE_peak_at_chr20:43767209..43767214,- | ||
|id=chr20:43767209..43767214,- | |id=chr20:43767209..43767214,- | ||
|ontology_enrichment_celltype=CL:0002076!8.73e-20!43;CL:0002368!1.95e-16!13;CL:0000223!2.64e-13!59;CL:0000066!2.85e-12!254;CL:0002202!5.57e-10!9;CL:0002632!5.57e-10!9;CL:0000244!3.68e-09!4;CL:0000731!3.68e-09!4;CL:0000575!2.51e-08!2;CL:0000622!6.92e-07!5 | |ontology_enrichment_celltype=CL:0002076!8.73e-20!43;CL:0002368!1.95e-16!13;CL:0000223!2.64e-13!59;CL:0000066!2.85e-12!254;CL:0002202!5.57e-10!9;CL:0002632!5.57e-10!9;CL:0000244!3.68e-09!4;CL:0000731!3.68e-09!4;CL:0000575!2.51e-08!2;CL:0000622!6.92e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.53e-15;3!CL:1000615;1.53e-15;3!CL:0002306;1.53e-15;3!CL:0000307;1.53e-15;3!CL:0000244;4.56e-12;4!CL:0000731;4.56e-12;4!CL:0002202;1.57e-11;9!CL:0002632;1.57e-11;9!CL:1000507;1.96e-10;10!CL:1000494;1.96e-10;10!CL:0002681;8.77e-09;12!CL:0002584;8.77e-09;12!CL:0000197;2.42e-08;6!CL:0000098;2.42e-08;6!CL:0002167;2.42e-08;6!CL:0002368;3.79e-08;13!CL:1000449;3.98e-07;15!CL:0000317;9.01e-07;2!CL:1000448;9.01e-07;2!CL:0002308;9.01e-07;2!CL:0000575;9.01e-07;2!CL:0002140;9.01e-07;2!CL:0000075;9.42e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.44e-16,3;CL:1000615,8.44e-16,3;CL:0002306,8.44e-16,3;CL:0000068,2.76e-15,3;CL:0000069,2.76e-15,3;CL:0000307,2.76e-15,3;CL:0000377,2.76e-15,3;CL:0000244,3.65e-12,4;CL:0000731,3.65e-12,4;CL:0002202,2.18e-11,9;CL:0002632,2.18e-11,9;CL:1000507,1.72e-10,10;CL:1000494,1.72e-10,10;CL:0002681,7.87e-09,12;CL:0002584,7.87e-09,12;CL:0000197,2.34e-08,6;CL:0000098,2.34e-08,6;CL:0002167,2.34e-08,6;CL:0002368,4.74e-08,13;CL:1000449,3.66e-07,15;CL:0000075,8.19e-07,27;CL:0000317,8.52e-07,2;CL:1000448,8.52e-07,2;CL:0002308,8.52e-07,2;CL:0002140,8.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.01e-23;2!CL:0000377;1.53e-15;3!UBERON:0005754;8.84e-13;1!UBERON:0008814;4.82e-07;2!UBERON:0010056;4.82e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;8.81e-35;3!UBERON:0004054;8.81e-35;3!UBERON:0005904;2.84e-26;4!UBERON:0006853;1.53e-15;3!UBERON:0007685;1.53e-15;3!UBERON:0004134;1.53e-15;3!UBERON:0001000;7.02e-13;1!UBERON:0005352;7.02e-13;1!UBERON:0000998;8.84e-13;1!UBERON:0006868;8.84e-13;1!UBERON:0001301;9.91e-13;1!UBERON:0000058;7.07e-11;10!UBERON:0004211;1.96e-10;10!UBERON:0009773;1.96e-10;10!UBERON:0001231;1.96e-10;10!UBERON:0004810;1.96e-10;10!UBERON:0003135;6.17e-10;11!UBERON:0000365;7.77e-10;5!UBERON:0006554;4.30e-09;30!UBERON:0001008;4.30e-09;30!UBERON:0004175;7.57e-09;21!UBERON:0001225;8.77e-09;12!UBERON:0008987;8.77e-09;12!UBERON:0003101;1.64e-08;22!UBERON:0000079;1.64e-08;22!UBERON:0005910;2.42e-08;6!UBERON:0003126;3.56e-07;7!UBERON:0001005;3.56e-07;7!UBERON:0001851;3.98e-07;15!UBERON:0006555;3.98e-07;15!UBERON:0000353;3.98e-07;15!UBERON:0004819;3.98e-07;15!UBERON:0001285;3.98e-07;15!UBERON:0007196;3.98e-07;15!UBERON:0001558;3.98e-07;15!UBERON:0007684;3.98e-07;15!UBERON:0002419;9.01e-07;2!UBERON:0007771;9.01e-07;2!UBERON:0003297;9.01e-07;2!UBERON:0001821;9.01e-07;2!UBERON:0003487;9.01e-07;2!UBERON:0001820;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.84e-35,3;UBERON:0004054,8.84e-35,3;UBERON:0005904,2.85e-26,4;UBERON:0006853,8.44e-16,3;UBERON:0007685,8.44e-16,3;UBERON:0004134,8.44e-16,3;UBERON:0006554,2.67e-14,47;UBERON:0001008,5.53e-14,48;UBERON:0001000,7.03e-13,1;UBERON:0005352,7.03e-13,1;UBERON:0000998,8.85e-13,1;UBERON:0006868,8.85e-13,1;UBERON:0001301,9.92e-13,1;UBERON:0006555,2.44e-11,16;UBERON:0004819,2.44e-11,16;UBERON:0002113,1.19e-10,26;UBERON:0003918,1.19e-10,26;UBERON:0011143,1.19e-10,26;UBERON:0005095,1.19e-10,26;UBERON:0007687,1.19e-10,26;UBERON:0004810,1.72e-10,10;UBERON:0003135,6.18e-10,11;UBERON:0000365,6.51e-10,5;UBERON:0003103,1.56e-09,68;UBERON:0000489,6.49e-09,31;UBERON:0001225,7.87e-09,12;UBERON:0008987,7.87e-09,12;UBERON:0003101,1.67e-08,22;UBERON:0000079,1.67e-08,22;UBERON:0005910,2.09e-08,6;UBERON:0004175,1.80e-07,25;UBERON:0001851,3.66e-07,15;UBERON:0004211,3.66e-07,15;UBERON:0009773,3.66e-07,15;UBERON:0000353,3.66e-07,15;UBERON:0001231,3.66e-07,15;UBERON:0001285,3.66e-07,15;UBERON:0007684,3.66e-07,15;UBERON:0004208,3.66e-07,15;UBERON:0003126,4.57e-07,7;UBERON:0001005,4.57e-07,7;UBERON:0007196,4.82e-07,15;UBERON:0001558,4.82e-07,15;UBERON:0002419,8.52e-07,2;UBERON:0007771,8.52e-07,2;UBERON:0003297,8.52e-07,2;UBERON:0001821,8.52e-07,2;UBERON:0003487,8.52e-07,2;UBERON:0001820,8.52e-07,2;UBERON:0005089,8.52e-07,2;UBERON:0005088,8.52e-07,2 | |||
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| ||
|short_description=p@chr20:43767209..43767214,- | |short_description=p@chr20:43767209..43767214,- | ||
}} | }} |
Latest revision as of 14:18, 28 July 2015
Short description: | p@chr20:43767209..43767214, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43767209..43767214, - |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.44e-16 | 3 |
kidney cortex tubule cell | 8.44e-16 | 3 |
epithelial cell of proximal tubule | 8.44e-16 | 3 |
duct epithelial cell | 2.76e-15 | 3 |
branched duct epithelial cell | 2.76e-15 | 3 |
tracheal epithelial cell | 2.76e-15 | 3 |
tracheoblast | 2.76e-15 | 3 |
transitional epithelial cell | 3.65e-12 | 4 |
urothelial cell | 3.65e-12 | 4 |
epithelial cell of tracheobronchial tree | 2.18e-11 | 9 |
epithelial cell of lower respiratory tract | 2.18e-11 | 9 |
kidney tubule cell | 1.72e-10 | 10 |
nephron tubule epithelial cell | 1.72e-10 | 10 |
kidney cortical cell | 7.87e-09 | 12 |
renal cortical epithelial cell | 7.87e-09 | 12 |
receptor cell | 2.34e-08 | 6 |
sensory epithelial cell | 2.34e-08 | 6 |
olfactory epithelial cell | 2.34e-08 | 6 |
respiratory epithelial cell | 4.74e-08 | 13 |
epithelial cell of nephron | 3.66e-07 | 15 |
columnar/cuboidal epithelial cell | 8.19e-07 | 27 |
sebum secreting cell | 8.52e-07 | 2 |
epithelial cell of sweat gland | 8.52e-07 | 2 |
epithelial cell of skin gland | 8.52e-07 | 2 |
acinar cell of sebaceous gland | 8.52e-07 | 2 |