FFCP PHASE1:Hg19::chr22:50970247..50970260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440836 | |EntrezGene=440836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34388 | |HGNC=34388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468249_5end | |association_with_transcript=0bp_to_ENST00000468249_5end | ||
|cluster_id=chr22:50970247..50970260,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_ODF3B_5end | |description=CAGE_peak_7_at_ODF3B_5end | ||
|id=chr22:50970247..50970260,- | |id=chr22:50970247..50970260,- | ||
|ontology_enrichment_celltype=CL:0000738!2.71e-41!140;CL:0002057!3.29e-37!42;CL:0000766!8.12e-34!76;CL:0000860!2.72e-33!45;CL:0002087!5.40e-31!119;CL:0000037!6.57e-30!172;CL:0000566!6.57e-30!172;CL:0002031!1.94e-29!124;CL:0000557!7.88e-29!71;CL:0002009!1.30e-28!65;CL:0000988!3.45e-28!182;CL:0002194!1.46e-27!63;CL:0000576!1.46e-27!63;CL:0000040!1.46e-27!63;CL:0000559!1.46e-27!63;CL:0002032!1.35e-26!165;CL:0000837!1.35e-26!165;CL:0000839!1.03e-25!70;CL:0000763!5.92e-22!112;CL:0000049!5.92e-22!112;CL:0002393!1.95e-09!9;CL:0002397!1.95e-09!9;CL:0000094!1.55e-08!8 | |ontology_enrichment_celltype=CL:0000738!2.71e-41!140;CL:0002057!3.29e-37!42;CL:0000766!8.12e-34!76;CL:0000860!2.72e-33!45;CL:0002087!5.40e-31!119;CL:0000037!6.57e-30!172;CL:0000566!6.57e-30!172;CL:0002031!1.94e-29!124;CL:0000557!7.88e-29!71;CL:0002009!1.30e-28!65;CL:0000988!3.45e-28!182;CL:0002194!1.46e-27!63;CL:0000576!1.46e-27!63;CL:0000040!1.46e-27!63;CL:0000559!1.46e-27!63;CL:0002032!1.35e-26!165;CL:0000837!1.35e-26!165;CL:0000839!1.03e-25!70;CL:0000763!5.92e-22!112;CL:0000049!5.92e-22!112;CL:0002393!1.95e-09!9;CL:0002397!1.95e-09!9;CL:0000094!1.55e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.08e-62;33!CL:0002057;9.08e-62;33!CL:0000576;2.54e-46;48!CL:0000473;3.15e-45;39!CL:0000234;3.15e-45;39!CL:0000766;6.10e-34;69!CL:0000094;3.99e-18;8!CL:0000763;2.18e-15;100!CL:0002393;1.44e-14;6!CL:0002397;1.44e-14;6!CL:0002087;3.90e-14;104!CL:0000081;1.03e-12;11!CL:0000738;1.34e-12;136!CL:0000775;6.52e-08;3!CL:0000988;1.18e-07;177!CL:0000226;1.46e-07;3!CL:0000875;1.46e-07;3!CL:0000842;1.46e-07;3!CL:0002396;1.46e-07;3!CL:0000767;2.65e-07;3!CL:0000784;6.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.88e-88,42;CL:0002057,6.88e-88,42;CL:0000473,9.26e-79,48;CL:0000234,9.26e-79,48;CL:0000766,3.04e-73,72;CL:0002194,3.20e-63,59;CL:0000576,3.20e-63,59;CL:0000040,3.20e-63,59;CL:0000559,3.20e-63,59;CL:0002009,9.71e-61,61;CL:0000557,1.15e-56,67;CL:0000839,3.48e-55,66;CL:0000738,6.31e-54,136;CL:0000763,1.39e-49,108;CL:0000049,1.39e-49,108;CL:0000037,9.65e-42,168;CL:0002087,1.10e-40,115;CL:0000988,1.03e-38,177;CL:0002032,3.86e-36,161;CL:0000837,3.86e-36,161;CL:0002031,4.04e-33,120;CL:0002393,1.72e-20,9;CL:0002397,1.72e-20,9;CL:0000094,2.50e-18,8;CL:0000081,7.40e-13,11;CL:0000134,1.24e-12,354;CL:0002320,4.65e-12,361;CL:0000219,4.74e-10,386;CL:0000034,8.19e-09,441;CL:0000048,1.20e-08,427;CL:0000723,2.69e-08,433;CL:0000775,5.56e-08,3;CL:0000875,1.31e-07,3;CL:0002396,1.31e-07,3;CL:0000226,1.57e-07,3;CL:0000842,1.57e-07,3;CL:0000767,1.96e-07,3;CL:0000784,5.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-62;42!CL:0000049;2.83e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-36!102;UBERON:0003061!3.31e-36!102;UBERON:0002193!3.33e-32!112;UBERON:0002371!4.63e-25!80;UBERON:0001474!9.48e-24!86;UBERON:0002405!3.54e-22!115;UBERON:0004765!1.75e-20!101;UBERON:0001434!1.75e-20!101;UBERON:0000178!7.94e-10!15;UBERON:0000179!7.94e-10!15;UBERON:0000463!7.94e-10!15;UBERON:0003081!2.95e-09!216;UBERON:0002204!2.48e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!3.31e-36!102;UBERON:0003061!3.31e-36!102;UBERON:0002193!3.33e-32!112;UBERON:0002371!4.63e-25!80;UBERON:0001474!9.48e-24!86;UBERON:0002405!3.54e-22!115;UBERON:0004765!1.75e-20!101;UBERON:0001434!1.75e-20!101;UBERON:0000178!7.94e-10!15;UBERON:0000179!7.94e-10!15;UBERON:0000463!7.94e-10!15;UBERON:0003081!2.95e-09!216;UBERON:0002204!2.48e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.33e-18;15!UBERON:0000179;6.33e-18;15!UBERON:0000463;6.33e-18;15!UBERON:0002390;6.33e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.10e-60,98;UBERON:0003061,7.10e-60,98;UBERON:0002193,6.84e-55,108;UBERON:0002371,2.01e-48,76;UBERON:0001474,6.27e-44,82;UBERON:0002405,5.27e-39,93;UBERON:0004765,7.23e-39,90;UBERON:0001434,1.11e-33,100;UBERON:0003081,6.23e-25,203;UBERON:0000178,5.72e-18,15;UBERON:0000179,5.72e-18,15;UBERON:0000463,5.72e-18,15;UBERON:0002204,5.39e-17,167;UBERON:0000926,9.45e-12,315;UBERON:0004120,9.45e-12,315;UBERON:0006603,9.45e-12,315;UBERON:0002384,2.81e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,9.04737836752479,1.91914699048606,4.64448369948228,0,0,0,0,0.568676929949686,0.587200878669695,13.2958898047651,9.02450013615638,14.3227174672462,0.447830948479849,0.647787332037959,0.257575567634187,6.97911546141911,3.02300754951048,4.60909716256851,6.0431549595478,4.52284676824008,2.47765096716083,11.507695692886,10.5025889676931,7.33094912654614,5.86067657252252,3.22742341791913,4.06279459783025,5.64727018627814,1.63743690034707,2.69668181334102,3.97909060082173,3.85114832491312,6.39337125799041,16.8224163095225,14.1619196911359,11.08184351385,8.41606792022894,2.8369261234557,1.86846674698672,10.5524439407832,7.30076085788282,8.68755378820467,4.23779651843358,4.41933163185078,3.16462387440884,5.49263744411049,9.14198489849687,5.66078342872615,6.51506060649672,8.10955221344134,5.46466994770072,7.41033133727246,4.77400025277816,3.28795476776341,1.75996244461323,0,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0,1.90810750907073,1.1384259382189,1.76171156811282,1.14681968437569,0,1.68152568894461,1.31692042387539,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.640456598628376,0.520237390239513,0.493313713811028,0.552700035571697,0,0,0,0,0,0.766440987203842,0,0,0.318565414324097,0,0,0.903450714466637,0.383959833463255,2.49861453104692,0.710331756132051,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.261958150995425,0.364295288292542,0,0,0,0,1.90792499444274,5.14795419702115,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,65.9226449052153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,4.75201142912821,0.989067717114227,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,0.743155811443641,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.432359860250884,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,13.4821264310493,2.99161459204025,23.207268752418,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,4.54889657470352,7.33428282783297,3.20182673410333,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0.384380134730212,0.893288987462089,0.30347334256665,0,0,0,1.84820148105653,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,2.92456187557541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,2.53723804616085,2.29391162142713,4.5571774973933,1.90585420366231,3.29089818468955,1.94541993357815,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0.659215496907038,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,1.43216939740487,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0,0,0,0.760531603454056,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0.182454789215666,0,0,0,0,0,3.98075451659474,0,0,0,0,0.313932918407225,0,0,0,0,0.489961987071888,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0.586654148204409,0.320635281006135,0,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0.471388069233591,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0.262887354279314,0,0.229160424011684,1.43574604915363,0,0,0,0.134366944973453,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.339936274560377,0.58620893471233,0,0,0.13223260174269,0.684347351537318,0,0.213574825135389,0.157204305099666,1.65695622138878,1.48849806543585,0.197611631897944,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,1.6468607378872,0,0,0,0.233713309847224,0,0,0,0,0,0,0.155437200582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| ||
|short_description=p7@ODF3B | |short_description=p7@ODF3B | ||
}} | }} |
Latest revision as of 21:08, 15 September 2015
Short description: | p7@ODF3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ODF3B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000468249_5end |
EntrezGene: | ODF3B |
HGNC: | 34388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.10e-60 | 98 |
blood island | 7.10e-60 | 98 |
hemolymphoid system | 6.84e-55 | 108 |
bone marrow | 2.01e-48 | 76 |
bone element | 6.27e-44 | 82 |
immune system | 5.27e-39 | 93 |
skeletal element | 7.23e-39 | 90 |
skeletal system | 1.11e-33 | 100 |
lateral plate mesoderm | 6.23e-25 | 203 |
blood | 5.72e-18 | 15 |
haemolymphatic fluid | 5.72e-18 | 15 |
organism substance | 5.72e-18 | 15 |
musculoskeletal system | 5.39e-17 | 167 |
mesoderm | 9.45e-12 | 315 |
mesoderm-derived structure | 9.45e-12 | 315 |
presumptive mesoderm | 9.45e-12 | 315 |
connective tissue | 2.81e-11 | 371 |