FFCP PHASE1:Hg19::chr8:22553096..22553123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22553096..22553123,+ | |||
|coexpression_cluster_id=C1561 | |||
|description=CAGE_peak_at_chr8:22553096..22553123,+ | |description=CAGE_peak_at_chr8:22553096..22553123,+ | ||
|id=chr8:22553096..22553123,+ | |id=chr8:22553096..22553123,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.03e-23!42;CL:0000860!3.67e-23!45;CL:0000766!8.15e-20!76;CL:0000557!3.95e-17!71;CL:0000738!4.97e-17!140;CL:0000839!2.17e-16!70;CL:0002031!1.40e-15!124;CL:0002009!5.14e-14!65;CL:0002194!1.03e-13!63;CL:0000576!1.03e-13!63;CL:0000040!1.03e-13!63;CL:0000559!1.03e-13!63;CL:0000988!1.11e-13!182;CL:0002087!3.67e-13!119;CL:0002032!3.67e-13!165;CL:0000837!3.67e-13!165;CL:0000037!7.48e-13!172;CL:0000566!7.48e-13!172;CL:0000763!1.56e-12!112;CL:0000049!1.56e-12!112;CL:0000134!1.39e-08!358;CL:0002320!3.24e-08!365;CL:0000219!5.05e-07!390 | |ontology_enrichment_celltype=CL:0002057!3.03e-23!42;CL:0000860!3.67e-23!45;CL:0000766!8.15e-20!76;CL:0000557!3.95e-17!71;CL:0000738!4.97e-17!140;CL:0000839!2.17e-16!70;CL:0002031!1.40e-15!124;CL:0002009!5.14e-14!65;CL:0002194!1.03e-13!63;CL:0000576!1.03e-13!63;CL:0000040!1.03e-13!63;CL:0000559!1.03e-13!63;CL:0000988!1.11e-13!182;CL:0002087!3.67e-13!119;CL:0002032!3.67e-13!165;CL:0000837!3.67e-13!165;CL:0000037!7.48e-13!172;CL:0000566!7.48e-13!172;CL:0000763!1.56e-12!112;CL:0000049!1.56e-12!112;CL:0000134!1.39e-08!358;CL:0002320!3.24e-08!365;CL:0000219!5.05e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000081;5.94e-14;11!CL:0000771;1.14e-13;2!CL:0000094;1.10e-12;8!CL:0000860;4.81e-11;33!CL:0002057;4.81e-11;33!CL:0000766;2.70e-10;69!CL:0000775;3.61e-09;3!CL:0000576;5.72e-09;48!CL:0000473;2.65e-08;39!CL:0000234;2.65e-08;39!CL:0000236;2.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.79e-22,72;CL:0000738,7.82e-18,136;CL:0000860,2.35e-14,42;CL:0002057,2.35e-14,42;CL:0002032,2.39e-14,161;CL:0000837,2.39e-14,161;CL:0000988,4.75e-14,177;CL:0000839,5.55e-14,66;CL:0000081,5.88e-14,11;CL:0000557,9.80e-14,67;CL:0000771,1.08e-13,2;CL:0000763,1.37e-13,108;CL:0000049,1.37e-13,108;CL:0000037,1.47e-13,168;CL:0002031,3.12e-13,120;CL:0000094,1.11e-12,8;CL:0000473,2.58e-12,48;CL:0000234,2.58e-12,48;CL:0002194,2.20e-11,59;CL:0000576,2.20e-11,59;CL:0000040,2.20e-11,59;CL:0000559,2.20e-11,59;CL:0002009,6.05e-11,61;CL:0002087,9.29e-11,115;CL:0000775,3.77e-09,3;CL:0000236,6.03e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.74e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.41e-07;4!DOID:1612;3.41e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.52e-07,4;DOID:1612,3.52e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-23!102;UBERON:0003061!1.23e-23!102;UBERON:0002193!1.26e-22!112;UBERON:0001474!5.07e-16!86;UBERON:0004765!5.11e-16!101;UBERON:0001434!5.11e-16!101;UBERON:0002371!1.35e-15!80;UBERON:0000178!3.06e-11!15;UBERON:0000179!3.06e-11!15;UBERON:0000463!3.06e-11!15;UBERON:0002405!4.71e-10!115;UBERON:0002204!2.26e-09!167;UBERON:0002384!5.53e-08!375;UBERON:0003081!7.21e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.92e-14;15!UBERON:0000179;4.92e-14;15!UBERON:0000463;4.92e-14;15!UBERON:0002390;2.79e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-21,98;UBERON:0003061,1.21e-21,98;UBERON:0002193,2.96e-19,108;UBERON:0000178,4.10e-14,15;UBERON:0000179,4.10e-14,15;UBERON:0000463,4.10e-14,15;UBERON:0002371,9.56e-14,76;UBERON:0001474,1.56e-12,82;UBERON:0004765,3.61e-11,90;UBERON:0002405,1.02e-10,93;UBERON:0001434,9.08e-10,100;UBERON:0003081,2.86e-08,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.14620108621927,0.985207073399349,0.393553906568396,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,1.18241114944293,1.03423704220986,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.898893937780338,0.612167784741805,0.641858054152187,1.27867425159808,0,0.398927315243264,0.426224750532694,1.16083695451434,0,0.622822248995575,0.75374599577023,1.0429658368404,1.3031330682307,0,1.10483290796269,1.89877432464531,0.211255286311942,1.4882300997553,1.25795187305026,0.336985893439485,0.150176892841506,0,0,0.79566670879636,0.91332076882317,1.75996244461323,2.18455444504853,0,1.28019066769952,0,0.574752439954483,1.98313461835459,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,15.511210565933,0,0,0,0.794455084879313,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11183958163348,5.15091697256924,0,0,0,0,0,0,0,0,0,19.7065295158377,1.40877494421162,0.829312462163088,0.432359860250884,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,2.24702107184155,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0.75894634753143,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,0.569647187174163,0.238231775457789,2.46817363851717,3.8908398671563,2.70015718619057,1.58625035258854,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53620382154229,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0.36408156524854,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0.470940769185074,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,2.37216902944498,0.988511511572023,0.417687798021821,0.134802265961354,0,0.468528891450678,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0.77380195455795,0.121499113316049,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0.5013797880454,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,1.77962244319307,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0.475680363110274,0,0,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0.462175628631418,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| ||
|short_description=p@chr8:22553096..22553123,+ | |short_description=p@chr8:22553096..22553123,+ | ||
}} | }} |
Latest revision as of 17:01, 31 July 2015
Short description: | p@chr8:22553096..22553123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22553096..22553123, + |
Coexpression cluster: | C1561_Mast_Eosinophils_Neutrophils_CD14_immature_Whole_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.79e-22 | 72 |
leukocyte | 7.82e-18 | 136 |
classical monocyte | 2.35e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-14 | 42 |
hematopoietic oligopotent progenitor cell | 2.39e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-14 | 161 |
hematopoietic cell | 4.75e-14 | 177 |
myeloid lineage restricted progenitor cell | 5.55e-14 | 66 |
blood cell | 5.88e-14 | 11 |
granulocyte monocyte progenitor cell | 9.80e-14 | 67 |
eosinophil | 1.08e-13 | 2 |
myeloid cell | 1.37e-13 | 108 |
common myeloid progenitor | 1.37e-13 | 108 |
hematopoietic stem cell | 1.47e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 3.12e-13 | 120 |
granulocyte | 1.11e-12 | 8 |
defensive cell | 2.58e-12 | 48 |
phagocyte | 2.58e-12 | 48 |
monopoietic cell | 2.20e-11 | 59 |
monocyte | 2.20e-11 | 59 |
monoblast | 2.20e-11 | 59 |
promonocyte | 2.20e-11 | 59 |
macrophage dendritic cell progenitor | 6.05e-11 | 61 |
nongranular leukocyte | 9.29e-11 | 115 |
neutrophil | 3.77e-09 | 3 |
B cell | 6.03e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-21 | 98 |
blood island | 1.21e-21 | 98 |
hemolymphoid system | 2.96e-19 | 108 |
blood | 4.10e-14 | 15 |
haemolymphatic fluid | 4.10e-14 | 15 |
organism substance | 4.10e-14 | 15 |
bone marrow | 9.56e-14 | 76 |
bone element | 1.56e-12 | 82 |
skeletal element | 3.61e-11 | 90 |
immune system | 1.02e-10 | 93 |
skeletal system | 9.08e-10 | 100 |
lateral plate mesoderm | 2.86e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.52e-07 | 4 |
breast cancer | 3.52e-07 | 4 |